CX293848

Overview
NameCX293848
Unique NameCX293848
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length477
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX293848 vs. ExPASy Swiss-Prot
Match: CP311_DROME (Probable cytochrome P450 311a1 OS=Drosophila melanogaster GN=Cyp311a1 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 6.608e-16
Identity = 47/149 (31.54%), Postives = 78/149 (52.35%), Query Frame = 1
Query:    1 TTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAT 447
            TT+  +++ +  L+K  + Q R R+E+  V  +   D   LN L  ++ ++ EVLRLY  +    R   + T++G  T  AGV + + M  +  D E +  D   FKPER+       A    SY PF+ GP +C+G+ ++L+  K+ T
Sbjct:  297 TTTAAMSFVLYALAKFPETQTRLRKELQDVALDETTDLDALNGLPYLEALIKEVLRLYTIVPTTGRQTTQSTEIGGRTYCAGVTLWINMYGLAHDKEYY-PDPYAFKPERWLPEDGAVAPPAFSYIPFSGGPHVCIGRRYSLLLMKLLT 444          
BLAST of CX293848 vs. ExPASy Swiss-Prot
Match: CP4A6_RABIT (Cytochrome P450 4A6 OS=Oryctolagus cuniculus GN=CYP4A6 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 8.630e-16
Identity = 47/150 (31.33%), Postives = 82/150 (54.67%), Query Frame = 1
Query:    1 TTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMA 444
            TT+  ++W    L+ H + Q R R+E+  + G+     +  L+ +    M + E LRLYPP+  + R +       +  +LP GV + L +  +H +P++W +  V F P  FA G   +A++  ++ PF+ GPR C+G+ FA+ E K+A
Sbjct:  325 TTASGISWIFYALATHPEHQHRCREEIQGLLGDGASITWEHLDQMPYTTMCIKEALRLYPPVPGVGRQLSSPVTFPDGRSLPKGVIVTLSIYALHHNPKVWPNPEV-FDPFPFAPG---SARHSHAFLPFSGGPRNCIGKQFAMNELKVA 470          
BLAST of CX293848 vs. ExPASy Swiss-Prot
Match: C4AA1_DROME (Probable cytochrome P450 4aa1 OS=Drosophila melanogaster GN=Cyp4aa1 PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 8.630e-16
Identity = 44/141 (31.21%), Postives = 84/141 (59.57%), Query Frame = 1
Query:   22 WTMVLLSKHQDWQERARQEVLQVF--GNNKPDYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAK 438
            +T+ LL+++ + Q+R   E+  +F   N  P   +L+ ++ ++M + E LRLYP +  ++R + +E +L   TLPAG  + +     H+   ++  D  +F+PERF+   S+  ++  ++ PF++GPR C+G  FA++E K
Sbjct:  323 FTLFLLTQNPECQDRCVLELATIFEDSNRAPTMTDLHEMRYMEMCIKEALRLYPSVPLIARKLGEEVRLAKHTLPAGSNVFICPYATHRLAHIY-PDPEKFQPERFSPENSE-NRHPYAFLPFSAGPRYCIGNRFAIMEIK 461          
BLAST of CX293848 vs. ExPASy Swiss-Prot
Match: CP4CA_MOUSE (Cytochrome P450 4A12A OS=Mus musculus GN=Cyp4a12a PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.127e-15
Identity = 46/150 (30.67%), Postives = 83/150 (55.33%), Query Frame = 1
Query:    1 TTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMA 444
            TT+  ++W    L+ + + Q+R R+E+  + G+     + +L+ +    M + E LR+YPP+ ++SR +       +  +LP G+ + L    +H +P +W +  V F P RFA G S+ +    S+ PF+ G R C+G+ FA+ E K+A
Sbjct:  323 TTASGISWIFYALATNPEHQQRCRKEIQSLLGDGTSITWNDLDKMPYTTMCIKEALRIYPPVPSVSRELSSPVTFPDGRSLPKGIHVMLSFYGLHHNPTVWPNPEV-FDPSRFAPGSSRHSH---SFLPFSGGARNCIGKQFAMNELKVA 468          
BLAST of CX293848 vs. ExPASy Swiss-Prot
Match: C97B2_SOYBN (Cytochrome P450 97B2 OS=Glycine max GN=CYP97B2 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.127e-15
Identity = 54/177 (30.51%), Postives = 86/177 (48.59%), Query Frame = 1
Query:    1 TTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKL--------GNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFA-----------EGISKAAK------NQV----SYFPFASGPRICVGQNFALVEAKMA 444
            TT+ +L W + LL+++    ++A+ EV  V G  +P +  L  L+ +++I+ E LRLYP    L R  LK   L            +PAG  + + +  +H+ P  W D   +F+PERF             G+  +        N+V    ++ PF  GPR CVG  FAL+E+ +A
Sbjct:  357 TTAAVLTWAVFLLAQNPSKMKKAQAEVDLVLGTGRPTFESLKELQYIRLIVVEALRLYPQPPLLIRRSLKSDVLPGGHKGEKDGYAIPAGTDVFISVYNLHRSPYFW-DRPDDFEPERFLVQNKNEEIEGWAGLDPSRSPGALYPNEVISDFAFLPFGGGPRKCVGDQFALMESTVA 532          
BLAST of CX293848 vs. ExPASy Swiss-Prot
Match: CP4V2_HUMAN (Cytochrome P450 4V2 OS=Homo sapiens GN=CYP4V2 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.923e-15
Identity = 45/148 (30.41%), Postives = 88/148 (59.46%), Query Frame = 1
Query:    1 TTSVLLNWTMVLLSKHQDWQERARQEVLQVFG-NNKPDYGE-LNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAK 438
            TT+  +NW++ LL  + + Q++   E+  VFG +++P   E L  L+ ++ ++ E LRL+P +   +R+V ++ ++    +  G +  +    +H+DP  + +   EF+PERF    ++  ++  +Y PF++GPR C+GQ FA++E K
Sbjct:  333 TTAAAINWSLYLLGSNPEVQKKVDHELDDVFGKSDRPATVEDLKKLRYLECVIKETLRLFPSVPLFARSVSEDCEVAGYRVLKGTEAVIIPYALHRDPRYFPNPE-EFQPERFFPENAQG-RHPYAYVPFSAGPRNCIGQKFAVMEEK 478          
BLAST of CX293848 vs. ExPASy Swiss-Prot
Match: CP4D8_DROME (Cytochrome P450 4d8 OS=Drosophila melanogaster GN=Cyp4d8 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 1.923e-15
Identity = 51/155 (32.90%), Postives = 86/155 (55.48%), Query Frame = 1
Query:    1 TTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP---DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKL-----GNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKM 441
            TT+  L++ +  LS+H + Q +  +E++QV G ++       +L  LK ++ ++ E LR+YPP+  + R +  + K      G+  +PAG +I + +  VH+ PE + +   EF PER   G   A    +   PF++GPR C+GQ FA +E KM
Sbjct:  271 TTTSALSFCLHELSRHPEVQAKMLEEIVQVLGTDRSRPVSIRDLGELKYMECVIKESLRMYPPVPIVGRKLQTDFKYTHSVHGDGVIPAGSEIIIGIFGVHRQPETFPNPD-EFIPERHENGSRVAPFKMI---PFSAGPRNCIGQKFAQLEMKM 421          
BLAST of CX293848 vs. ExPASy Swiss-Prot
Match: CP4B1_MOUSE (Cytochrome P450 4B1 OS=Mus musculus GN=Cyp4b1 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.923e-15
Identity = 47/151 (31.13%), Postives = 85/151 (56.29%), Query Frame = 1
Query:    1 TTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKE-TKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMAT 447
            TT+  ++W +  ++ +   Q+R R+EV ++ G+     + +L  +  + M + E  RLYPP+  + R + K  T +   +LPAG  I L +  +H++  +W D  V F P RF+   +   ++  ++ PF++GPR C+GQ FA+ E K+ T
Sbjct:  319 TTTSGISWFLYCMALYPMHQQRCREEVREILGDRDSFQWDDLAQMTYLTMCMKECFRLYPPVPQVYRQLSKPVTFVDGRSLPAGSLISLHIYALHRNSAVWPDPEV-FDPLRFSPE-NMTGRHPFAFMPFSAGPRNCIGQQFAMNEMKVVT 467          
BLAST of CX293848 vs. ExPASy Swiss-Prot
Match: CP4AM_HUMAN (Cytochrome P450 4A22 OS=Homo sapiens GN=CYP4A22 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.923e-15
Identity = 46/150 (30.67%), Postives = 83/150 (55.33%), Query Frame = 1
Query:    1 TTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKP-DYGELNHLKIVQMILYEVLRLYPPLTALSRAVLKETKLGN-LTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFASGPRICVGQNFALVEAKMA 444
            TT+  ++W +  L+ H   QER R+E+  + G+     +  L+ +    M + E LRLYPP+  + R +       +  +LP G+ + L +  +H +P++W +  V F P RFA G   +A++  ++ PF+ G R C+G+ FA+ + K+A
Sbjct:  325 TTASGISWILYALATHPKHQERCREEIHGLLGDGASITWNHLDQMPYTTMCIKEALRLYPPVPGIGRELSTPVTFPDGRSLPKGIMVLLSIYGLHHNPKVWPNLEV-FDPSRFAPG---SAQHSHAFLPFSGGSRNCIGKQFAMNQLKVA 470          
BLAST of CX293848 vs. ExPASy Swiss-Prot
Match: C97B3_ARATH (Cytochrome P450 97B3 OS=Arabidopsis thaliana GN=CYP97B3 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 1.923e-15
Identity = 56/177 (31.64%), Postives = 89/177 (50.28%), Query Frame = 1
Query:    1 TTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYGELNHLKIVQMILYEVLRLYPPLTALSRAVLK-ETKLG-------NLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERF-----AEGISKAA------------KNQV----SYFPFASGPRICVGQNFALVEAKMA 444
            TT+ +L W + LLS++ +   +A+ E+  V G   P Y  +  L+ +++I+ EVLRL+P    L R  LK ET  G          +P G  I + +  +H+ P  W D+  +F+PERF     + GI   A             N++    ++ PF  GPR C+G  FAL+E+ +A
Sbjct:  363 TTAAVLTWAVFLLSQNPEKIRKAQAEIDAVLGQGPPTYESMKKLEYIRLIVVEVLRLFPQPPLLIRRTLKPETLPGGHKGEKEGHKVPKGTDIFISVYNLHRSPYFW-DNPHDFEPERFLRTKESNGIEGWAGFDPSRSPGALYPNEIIADFAFLPFGGGPRKCIGDQFALMESTVA 538          
The following BLAST results are available for this feature:
BLAST of CX293848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
CP311_DROME6.608e-1631.54Probable cytochrome P450 311a1 OS=Drosophila melan... [more]
CP4A6_RABIT8.630e-1631.33Cytochrome P450 4A6 OS=Oryctolagus cuniculus GN=CY... [more]
C4AA1_DROME8.630e-1631.21Probable cytochrome P450 4aa1 OS=Drosophila melano... [more]
CP4CA_MOUSE1.127e-1530.67Cytochrome P450 4A12A OS=Mus musculus GN=Cyp4a12a ... [more]
C97B2_SOYBN1.127e-1530.51Cytochrome P450 97B2 OS=Glycine max GN=CYP97B2 PE=... [more]
CP4V2_HUMAN1.923e-1530.41Cytochrome P450 4V2 OS=Homo sapiens GN=CYP4V2 PE=1... [more]
CP4D8_DROME1.923e-1532.90Cytochrome P450 4d8 OS=Drosophila melanogaster GN=... [more]
CP4B1_MOUSE1.923e-1531.13Cytochrome P450 4B1 OS=Mus musculus GN=Cyp4b1 PE=1... [more]
CP4AM_HUMAN1.923e-1530.67Cytochrome P450 4A22 OS=Homo sapiens GN=CYP4A22 PE... [more]
C97B3_ARATH1.923e-1531.64Cytochrome P450 97B3 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionC05001E11SK FlavSen1 Citrus clementina cDNA clone C05001E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX293848 ID=CX293848; Name=CX293848; organism=Citrus clementina; type=EST; length=477bp
ACTACCTCTGTTTTGCTTAATTGGACAATGGTCTTATTGAGCAAGCATCA
AGATTGGCAAGAACGTGCAAGGCAAGAGGTTTTGCAAGTGTTTGGCAATA
ATAAGCCCGACTATGGTGAATTGAACCACCTCAAAATTGTCCAGATGATA
CTTTACGAGGTACTCAGGCTTTATCCGCCCTTAACTGCGCTTAGTCGAGC
TGTTCTTAAGGAAACGAAACTCGGAAACTTGACATTACCCGCTGGGGTTC
AAATTGGCTTGCCAATGATCCTAGTTCACCAGGATCCTGAACTTTGGGGT
GACGATGCAGTTGAGTTTAAGCCGGAAAGGTTTGCGGAAGGAATTTCAAA
GGCGGCAAAAAATCAAGTTTCATATTTCCCATTCGCATCGGGTCCTAGGA
TATGTGTTGGACAAAATTTTGCTCTAGTAGAAGCAAAAATGGCCACCGGC
AATGATTCTTCAAAACTACTCATTCGA
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