CX294013

Overview
NameCX294013
Unique NameCX294013
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length319
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71B1_THLAR (Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 2.991e-20
Identity = 50/98 (51.02%), Postives = 64/98 (65.31%), Query Frame = 3
Query:   24 KNNTKLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYEY 317
            K    LPPGP  LP IGNLHQL   KPH    ELSK YGPLMSL+LG   ++V +SV+  +++LKT+ L+ CSRP      +++YN  DL  SPY +Y
Sbjct:   24 KPKKNLPPGPPRLPIIGNLHQLG-EKPHRAMVELSKTYGPLMSLKLGSVTTVVATSVETVRDVLKTYDLECCSRPYMTYPARITYNLKDLVFSPYDKY 120          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71BN_ARATH (Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=CYP71B23 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 3.907e-20
Identity = 49/99 (49.49%), Postives = 64/99 (64.65%), Query Frame = 3
Query:   18 SSKNNTKLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYE 314
            S  +  KLPPGP  LP IGNLH LN   PH     L K +GP+M L+LG+ P +V+SS + A+E+LKTH L  CSRP  +A + +SYN  D+  +PY E
Sbjct:   24 SQSSKLKLPPGPPKLPIIGNLHYLN-GLPHKCLLNLWKIHGPVMQLQLGYVPLVVISSNQAAEEVLKTHDLDCCSRPETIASKTISYNFKDIGFAPYGE 121          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.102e-20
Identity = 49/93 (52.69%), Postives = 61/93 (65.59%), Query Frame = 3
Query:   36 KLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYE 314
            KLPPGP  LPFIGNLHQL    P      L+ KYGP++ LR GF P +V+SS + A+E+LK H L+ CSRP     RK+SYN  D+  +PY E
Sbjct:   27 KLPPGPPKLPFIGNLHQLQELPPR----NLNHKYGPVILLRFGFVPLVVISSKEAAEEVLKIHDLECCSRPETAGTRKISYNFKDIGFAPYGE 115          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71BA_ARATH (Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=CYP71B10 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.102e-20
Identity = 49/100 (49.00%), Postives = 66/100 (66.00%), Query Frame = 3
Query:   18 SSKNNTKLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYEY 317
            S +   + PP P GLP IGNLHQL    PH    +LSKKYGP+M L+LG  P+++VS+ + AK++LK + L  CSRP+    RKLSYN LD+  S + +Y
Sbjct:   23 SKRRWVRQPPSPPGLPIIGNLHQLG-ELPHQSLCKLSKKYGPVMLLKLGRVPTVIVSTPETAKQVLKDYDLHCCSRPSLEGTRKLSYNYLDIAFSRFDDY 121          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71AP_ARATH (Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=CYP71A25 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.102e-20
Identity = 53/105 (50.48%), Postives = 65/105 (61.90%), Query Frame = 3
Query:    3 LQRNISSKNNTKLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYEY 317
            L++ +S K   K PP P GLP IGNLHQL     H    +LS++YGPLM L LG  P L+VSS  MA+EILKTH   F +RP     +KL YN  D+  +PY EY
Sbjct:   19 LKKQLSGKKG-KTPPSPPGLPLIGNLHQLG-RHTHRSLCDLSRRYGPLMLLHLGRVPVLIVSSADMAQEILKTHDQAFANRPRSKLSQKLLYNNRDVASAPYGEY 121          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71DA_SOYBN (Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.664e-20
Identity = 52/107 (48.60%), Postives = 71/107 (66.36%), Query Frame = 3
Query:    3 LQRNISSKNNT-KLPPGPRGLPFIGNLHQLNVSKP-HVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYEY 317
            +QR+ S  ++T KLPPGPR LP IGN+HQ+  S P H     L+ KYGPLM L+LG   +++V+S +MA+EI+KTH L F  RP  V  R +SYNG  +  S + +Y
Sbjct:   30 VQRSDSKTSSTCKLPPGPRTLPLIGNIHQIVGSLPVHYYLKNLADKYGPLMHLKLGEVSNIIVTSPEMAQEIMKTHDLNFSDRPDFVLSRIVSYNGSGIVFSQHGDY 136          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71B4_ARATH (Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 1.137e-19
Identity = 52/96 (54.17%), Postives = 63/96 (65.62%), Query Frame = 3
Query:   21 SKNNTKLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPY 308
            SK N  LPPGP  LP IGNLHQL     H    +LSKK+GP+M LRLGF+P +V+SS + A+E LKTH L+ CSRP  +A R  S NG D+    Y
Sbjct:   28 SKQN--LPPGPAKLPIIGNLHQLQ-GLLHKCLHDLSKKHGPVMHLRLGFAPMVVISSSEAAEEALKTHDLECCSRPITMASRVFSRNGKDIGFGVY 120          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.485e-19
Identity = 49/93 (52.69%), Postives = 62/93 (66.67%), Query Frame = 3
Query:   36 KLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYE 314
            KLPPGP+ LP IGNLHQ     P      LS+KYGP++ LR GF P +V+SS + A+E+LKTH L+ CSRP  V  R +SYN  D+  +PY E
Sbjct:   27 KLPPGPKKLPIIGNLHQRRELHPRNSR-NLSEKYGPIVFLRYGFVPVVVISSKEAAEEVLKTHDLECCSRPETVGTRAISYNFKDIGFAPYGE 118          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71A3_SOLME (Cytochrome P450 71A3 (Fragment) OS=Solanum melongena GN=CYP71A3 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.485e-19
Identity = 49/100 (49.00%), Postives = 65/100 (65.00%), Query Frame = 3
Query:   18 SSKNNTKLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYEY 317
            +S NN KLPP PR LP IGNLHQL +  PH    +LSKKYGP+M L LG  P +V SSV+  ++I+KT+ L + +RP      +L Y   D++ SP+ EY
Sbjct:   18 TSNNNKKLPPSPRKLPIIGNLHQLGLH-PHRSLHKLSKKYGPVMLLHLGSKPVIVASSVEAVRDIMKTNDLVWSNRPKSKMADRLIYGSKDVSFSPHGEY 116          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71A9_SOYBN (Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.939e-19
Identity = 52/103 (50.49%), Postives = 66/103 (64.08%), Query Frame = 3
Query:    9 RNISSKNNTKLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYEY 317
            R  +++    LPPGPR LPFIGNLHQL  + PH     LS K+GPLM L+LG  P+LVVSS +MA+EI K H   F  RP+  A  +L Y G  ++ +PY EY
Sbjct:   23 RKPTAEKRRLLPPGPRKLPFIGNLHQLG-TLPHQSLQYLSNKHGPLMFLQLGSIPTLVVSSAEMAREIFKNHDSVFSGRPSLYAANRLGY-GSTVSFAPYGEY 123          
The following BLAST results are available for this feature:
BLAST of CX294013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
C71B1_THLAR2.991e-2051.02Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1... [more]
C71BN_ARATH3.907e-2049.49Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=C... [more]
C71BT_ARATH5.102e-2052.69Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]
C71BA_ARATH5.102e-2049.00Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=C... [more]
C71AP_ARATH5.102e-2050.48Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=C... [more]
C71DA_SOYBN6.664e-2048.60Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 P... [more]
C71B4_ARATH1.137e-1954.17Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CY... [more]
C71BS_ARATH1.485e-1952.69Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
C71A3_SOLME1.485e-1949.00Cytochrome P450 71A3 (Fragment) OS=Solanum melonge... [more]
C71A9_SOYBN1.939e-1950.49Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC05004G11SK FlavRip1 Citrus clementina cDNA clone C05004G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294013 ID=CX294013; Name=CX294013; organism=Citrus clementina; type=EST; length=319bp
TTTTGCAGAGGAACATATCCTCAAAAAATAATACTAAATTACCACCAGGC
CCCCGGGGCCTTCCTTTCATCGGTAACTTGCACCAGCTTAATGTCTCAAA
GCCTCACGTATTATTTTGGGAACTGTCAAAAAAATATGGCCCCCTCATGT
CCTTGCGTCTTGGGTTTTCGCCATCCTTAGTAGTTTCCTCAGTGAAAATG
GCTAAAGAGATATTGAAAACTCATGGCCTTCAATTTTGCAGCAGGCCAGC
CTAAGTAGCTCAACGAAAGTTATCTTACAATGGTCTTGATTTAACAATTT
CACCCTATTATGAATATTG
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