CX294013

Overview
NameCX294013
Unique NameCX294013
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length319
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71BC_ARATH (Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=CYP71B12 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.307e-19
Identity = 49/101 (48.51%), Postives = 64/101 (63.37%), Query Frame = 3
Query:   15 ISSKNNTKLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYEY 317
            I  K    LPPGP  LP IGNLHQL  SKPH   ++LS+ YGPLMSL+ G   ++V S+ +  KE+LKT  ++ CSRP      +++YN  DL  SPY +Y
Sbjct:   21 IIRKTKKNLPPGPPRLPIIGNLHQLG-SKPHRSMFKLSETYGPLMSLKFGSVSTVVASTPETVKEVLKTFDVECCSRPNMTYPARVTYNLKDLCFSPYSKY 120          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.307e-19
Identity = 49/105 (46.67%), Postives = 66/105 (62.86%), Query Frame = 3
Query:    3 LQRNISSKNNTKLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYEY 317
            L+ N   +    LPP P  LP IGNLHQL  + PH     L+ + GPL+ L LG  P+L+VS+ ++A+EILKTH L F SRP+  A R++ Y+  D+  SPY EY
Sbjct:   19 LKLNEKREKKPNLPPSPPNLPIIGNLHQLG-NLPHRSLRSLANELGPLILLHLGHIPTLIVSTAEIAEEILKTHDLIFASRPSTTAARRIFYDCTDVAFSPYGEY 122          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C83B1_ARATH (Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.319e-19
Identity = 43/100 (43.00%), Postives = 63/100 (63.00%), Query Frame = 3
Query:   18 SSKNNTKLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYEY 317
            ++K + +LPPGP+GLP IGNLHQ+    P    + LSK YGP+ ++++G     V+SS ++AKE+LKT  L F +RP    Q+ +SY G +L    Y  Y
Sbjct:   22 TTKKSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQTMSYQGRELGFGQYTAY 121          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71E1_SORBI (4-hydroxyphenylacetaldehyde oxime monooxygenase OS=Sorghum bicolor GN=CYP71E1 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.319e-19
Identity = 46/94 (48.94%), Postives = 64/94 (68.09%), Query Frame = 3
Query:   36 KLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYEY 317
            +LPPGP  LP +GNLH L    PH    EL+++YGP+M LRLG  P++VVSS + A+E+LK H +  CSRPA    ++LSY+  ++  +PY EY
Sbjct:   54 RLPPGPAQLPILGNLHLLG-PLPHKNLRELARRYGPVMQLRLGTVPTVVVSSAEAAREVLKVHDVDCCSRPASPGPKRLSYDLKNVGFAPYGEY 146          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.319e-19
Identity = 50/107 (46.73%), Postives = 67/107 (62.62%), Query Frame = 3
Query:    3 LQRNISSKNNTKLPPGPRGLPFIGNLHQLNV--SKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYEY 317
            L +    K++ KLPPGP  LP IGNLHQL +  S P     +L +KYGPLM L+LG   +LVVSS KMA E++KTH + F  RP  +A + + Y   D+  +PY +Y
Sbjct:   21 LVKTYKQKSSHKLPPGPWRLPIIGNLHQLALAASLPDQALQKLVRKYGPLMHLQLGEISTLVVSSPKMAMEMMKTHDVHFVQRPQLLAPQFMVYGATDIAFAPYGDY 127          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71BB_ARATH (Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=CYP71B11 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.319e-19
Identity = 48/98 (48.98%), Postives = 62/98 (63.27%), Query Frame = 3
Query:   24 KNNTKLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYEY 317
            K    LPPGP  LP IGNLHQL  SKPH   ++LS+KYGPLM+LR G   ++V S+ +  KE+LKT   + CSRP      +L+YN  D+   PY +Y
Sbjct:   24 KTKKNLPPGPPRLPIIGNLHQLG-SKPHSSMFKLSEKYGPLMALRFGSVSTVVASTPETVKEVLKTFDAECCSRPYMTYPARLTYNLKDIGFCPYTKY 120          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71AG_ARATH (Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=CYP71A16 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.319e-19
Identity = 47/103 (45.63%), Postives = 66/103 (64.08%), Query Frame = 3
Query:    9 RNISSKNNTKLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYEY 317
            +++  + N+ LPP P  LP IGNLHQL++  PH     LS ++GPLM LR G  P L+VSS  +A +++KTH L+F +RP   +  K+S  G DL  +PY EY
Sbjct:   22 KSLLKRPNSNLPPSPWRLPVIGNLHQLSLH-PHRALSSLSARHGPLMLLRFGRVPVLIVSSADVAHDVMKTHDLKFANRPITKSAHKISNGGRDLVFAPYGEY 123          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71BD_ARATH (Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=CYP71B13 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.257e-18
Identity = 48/98 (48.98%), Postives = 62/98 (63.27%), Query Frame = 3
Query:   24 KNNTKLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYEY 317
            K    LPPGP  LP IGNLHQL  SKPH   ++LS+KYGPL+ L+LG  PS+V S+ +  K++LKT     CSR       ++SYN  DL  +PY +Y
Sbjct:   24 KTKKNLPPGPPRLPIIGNLHQLG-SKPHRSMFKLSEKYGPLVYLKLGKVPSVVASTPETVKDVLKTFDKDCCSRAFLTYPARISYNLKDLAFAPYSKY 120          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71BM_ARATH (Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=CYP71B22 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.641e-18
Identity = 48/96 (50.00%), Postives = 62/96 (64.58%), Query Frame = 3
Query:   21 SKNNTKLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPY 308
            S +  KLPPGP GLP IGNLHQL  S  H  F +LS+ YGP+M L  G  P +VVS+ + A+E+LKTH L+ C+RP   A +  SYN  D+  + Y
Sbjct:   22 SPSKGKLPPGPLGLPIIGNLHQLGKSL-HRSFHKLSQNYGPVMFLHFGVVPVVVVSTREAAEEVLKTHDLETCTRPKLTATKLFSYNYKDIGFAQY 116          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71A2_SOLME (Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.657e-18
Identity = 49/100 (49.00%), Postives = 61/100 (61.00%), Query Frame = 3
Query:   18 SSKNNTKLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYEY 317
            S K N  L P PR LP IGNLHQL  S PH    +LS+KYGP+M L  G  P +V SSV  A++I+KTH + + SRP      +LSY   D+  SP+ EY
Sbjct:   30 SKKQNMLLLPSPRKLPIIGNLHQLG-SLPHRSLHKLSQKYGPVMLLHFGSKPVIVASSVDAARDIMKTHDVVWASRPKSSIVDRLSYGSKDVGFSPFGEY 128          
The following BLAST results are available for this feature:
BLAST of CX294013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
C71BC_ARATH3.307e-1948.51Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=C... [more]
C71A1_PERAE3.307e-1946.67Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]
C83B1_ARATH4.319e-1943.00Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CY... [more]
C71E1_SORBI4.319e-1948.944-hydroxyphenylacetaldehyde oxime monooxygenase OS... [more]
C71D8_SOYBN4.319e-1946.73Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C71BB_ARATH4.319e-1948.98Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=C... [more]
C71AG_ARATH4.319e-1945.63Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=C... [more]
C71BD_ARATH1.257e-1848.98Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=C... [more]
C71BM_ARATH1.641e-1850.00Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=C... [more]
C71A2_SOLME3.657e-1849.00Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71... [more]

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Properties
Property NameValue
Genbank descriptionC05004G11SK FlavRip1 Citrus clementina cDNA clone C05004G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294013 ID=CX294013; Name=CX294013; organism=Citrus clementina; type=EST; length=319bp
TTTTGCAGAGGAACATATCCTCAAAAAATAATACTAAATTACCACCAGGC
CCCCGGGGCCTTCCTTTCATCGGTAACTTGCACCAGCTTAATGTCTCAAA
GCCTCACGTATTATTTTGGGAACTGTCAAAAAAATATGGCCCCCTCATGT
CCTTGCGTCTTGGGTTTTCGCCATCCTTAGTAGTTTCCTCAGTGAAAATG
GCTAAAGAGATATTGAAAACTCATGGCCTTCAATTTTGCAGCAGGCCAGC
CTAAGTAGCTCAACGAAAGTTATCTTACAATGGTCTTGATTTAACAATTT
CACCCTATTATGAATATTG
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