CX294013

Overview
NameCX294013
Unique NameCX294013
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length319
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 9.007e-17
Identity = 48/93 (51.61%), Postives = 56/93 (60.22%), Query Frame = 3
Query:   39 LPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYEY 317
            LPP P  +P IGNLHQL++  PH     LS +YGPLM L  G  P LVVSS + A EILKTH L+F +RP   A   L   G D+   PY EY
Sbjct:   33 LPPSPWRIPVIGNLHQLSLH-PHRSLHSLSLRYGPLMLLHFGRVPILVVSSSEAAHEILKTHDLKFANRPKSKAVHGLMNGGRDVVFGPYGEY 124          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71BP_ARATH (Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=CYP71B25 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.536e-16
Identity = 46/96 (47.92%), Postives = 61/96 (63.54%), Query Frame = 3
Query:   21 SKNNTKLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPY 308
            SK N  LPPGP  LP +GNLHQL     H    ELSKK+GP+M L+LGF P +++SS + A+E LKTH ++ C+RP   A R  S N  ++ +  Y
Sbjct:   28 SKRN--LPPGPAKLPIVGNLHQLQ-GMVHRCLHELSKKHGPVMHLQLGFVPLVLISSSEAAEEALKTHDIECCTRPNTNAARVFSRNNKNIGLGAY 120          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71AQ_ARATH (Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=CYP71A26 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.536e-16
Identity = 49/98 (50.00%), Postives = 58/98 (59.18%), Query Frame = 3
Query:   24 KNNTKLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYEY 317
            K NT   P P GLP IGNLHQL    PH     LS +YGPLM L  G  P LVVSS ++A+++LKTH   F SRP      KL Y+  D+  +PY EY
Sbjct:   28 KRNTL--PSPPGLPLIGNLHQLG-RHPHRSLCSLSHRYGPLMLLHFGRVPVLVVSSAELARDVLKTHDRVFASRPRSKIFEKLLYDKHDVASAPYGEY 122          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71AM_ARATH (Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=CYP71A22 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.536e-16
Identity = 48/105 (45.71%), Postives = 61/105 (58.10%), Query Frame = 3
Query:    3 LQRNISSKNNTKLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYEY 317
            +++    K+NT  P  P  LP IGNLHQL    PH     LS +YGPLM LR G  P LVVSS  +A++ILKT+   F SRP      K+ Y   D+ ++PY EY
Sbjct:   22 IKQKKGKKSNT--PASPPRLPLIGNLHQLG-RHPHRSLCSLSNRYGPLMLLRFGLVPVLVVSSADVARDILKTYDRVFASRPRSKIFEKIFYEARDVALAPYGEY 123          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.006e-16
Identity = 51/107 (47.66%), Postives = 62/107 (57.94%), Query Frame = 3
Query:    3 LQRNISSKNNTK--LPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYEY 317
            L R    +  TK  LPP P  LP IGNLHQL++  PH     LS +YGPLM L  G  P LVVSS + A+E+LKTH  +F +RP   A   L   G D+  +PY EY
Sbjct:   19 LLRRFLKRTATKVNLPPSPWRLPVIGNLHQLSLH-PHRSLRSLSLRYGPLMLLHFGRVPILVVSSGEAAQEVLKTHDHKFANRPRSKAVHGLMNGGRDVVFAPYGEY 124          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71BK_ARATH (Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=CYP71B20 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.620e-16
Identity = 44/90 (48.89%), Postives = 55/90 (61.11%), Query Frame = 3
Query:   39 LPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPY 308
            LPP P   P IGNLHQ+    PH     L+++YGP+M L  GF P  VVSS + A+E+L+TH L  CSRP  V  R LS N  D+  +PY
Sbjct:   30 LPPSPPKFPVIGNLHQIG-ELPHRSLQHLAERYGPVMLLHFGFVPVTVVSSREAAEEVLRTHDLDCCSRPKLVGTRLLSRNFKDVCFTPY 118          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71B8_ARATH (Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CYP71B8 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.620e-16
Identity = 45/93 (48.39%), Postives = 59/93 (63.44%), Query Frame = 3
Query:   36 KLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYE 314
            KLPPGP GLP IGNLHQL     H  F +LS ++GP+M LR G  P +V+SS + AK++LK+  L+ CSRP  VA    + N  D+  + Y E
Sbjct:   29 KLPPGPTGLPIIGNLHQLG-RLLHSSFHKLSLEHGPVMLLRFGVVPMVVISSKEAAKQVLKSRDLETCSRPKLVANGLFTRNFKDIAFAQYGE 120          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C75A1_PINTA (Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.422e-16
Identity = 44/99 (44.44%), Postives = 59/99 (59.60%), Query Frame = 3
Query:   21 SKNNTKLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYEY 317
            S+ N +LPPGP   P IGN HQ+ +   H     L++KYGP++ LR G  P++VVSS + AK  LKTH L F SRP     +   YN  D+  SPY ++
Sbjct:   36 SQRNERLPPGPYPWPIIGNFHQVRLPL-HRTLKNLAEKYGPILFLRFGSVPTVVVSSSEKAKHFLKTHDLIFASRPPTSVGKYFFYNFKDIAFSPYGDH 133          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71DB_LOTJA (Cytochrome P450 71D11 (Fragment) OS=Lotus japonicus GN=CYP71D11 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.422e-16
Identity = 44/106 (41.51%), Postives = 65/106 (61.32%), Query Frame = 3
Query:    3 LQRNISSKNNT-KLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYEY 317
            L++N+   ++   +PPGP  LP IG++  L  S PH    +L+KKYGPLM L+LG    ++VSS + AKE++KTH + F SRP  +    + Y   D+  SPY +Y
Sbjct:    6 LRKNLKKPDSIPNIPPGPWKLPIIGSIPHLVGSPPHRKLRDLAKKYGPLMHLQLGEVIFIIVSSAEYAKEVMKTHDVTFASRPRSLFTDIVFYGSTDIGFSPYGDY 111          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71BJ_ARATH (Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=CYP71B19 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.624e-16
Identity = 43/95 (45.26%), Postives = 57/95 (60.00%), Query Frame = 3
Query:   24 KNNTKLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPY 308
            ++   LPP P   P IGNLHQ+    PH     L+++YGP+M L  GF P  VVSS + A+E+L+TH L  CSRP  V  R LS +  D+  +PY
Sbjct:   25 RSKWNLPPSPPKFPVIGNLHQIG-ELPHRSLQHLAERYGPVMLLHFGFVPITVVSSREAAEEVLRTHDLDCCSRPKLVGTRLLSRDFKDIGFTPY 118          
The following BLAST results are available for this feature:
BLAST of CX294013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
C71AI_ARATH9.007e-1751.61Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
C71BP_ARATH1.536e-1647.92Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=C... [more]
C71AQ_ARATH1.536e-1650.00Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=C... [more]
C71AM_ARATH1.536e-1645.71Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=C... [more]
C71AD_ARATH2.006e-1647.66Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]
C71BK_ARATH2.620e-1648.89Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=C... [more]
C71B8_ARATH2.620e-1648.39Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CY... [more]
C75A1_PINTA3.422e-1644.44Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 P... [more]
C71DB_LOTJA3.422e-1641.51Cytochrome P450 71D11 (Fragment) OS=Lotus japonicu... [more]
C71BJ_ARATH7.624e-1645.26Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC05004G11SK FlavRip1 Citrus clementina cDNA clone C05004G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294013 ID=CX294013; Name=CX294013; organism=Citrus clementina; type=EST; length=319bp
TTTTGCAGAGGAACATATCCTCAAAAAATAATACTAAATTACCACCAGGC
CCCCGGGGCCTTCCTTTCATCGGTAACTTGCACCAGCTTAATGTCTCAAA
GCCTCACGTATTATTTTGGGAACTGTCAAAAAAATATGGCCCCCTCATGT
CCTTGCGTCTTGGGTTTTCGCCATCCTTAGTAGTTTCCTCAGTGAAAATG
GCTAAAGAGATATTGAAAACTCATGGCCTTCAATTTTGCAGCAGGCCAGC
CTAAGTAGCTCAACGAAAGTTATCTTACAATGGTCTTGATTTAACAATTT
CACCCTATTATGAATATTG
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