CX294013

Overview
NameCX294013
Unique NameCX294013
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length319
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 6.455e-15
Identity = 43/100 (43.00%), Postives = 58/100 (58.00%), Query Frame = 3
Query:   18 SSKNNTKLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYEY 317
            ++  N  LPP P  LP IGNLHQL++   H     LS +YGPLM L  G +P L+VSS  +A +++KTH L   +RP      K+   G D+  +PY EY
Sbjct:   25 TATKNFNLPPSPWRLPVIGNLHQLSLHT-HRSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDVMKTHDLVCANRPKTKVVDKILSGGRDVAFAPYGEY 123          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C99A2_ORYSJ (Cytochrome P450 99A2 OS=Oryza sativa subsp. japonica GN=CYP99A2 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 1.438e-14
Identity = 44/105 (41.90%), Postives = 60/105 (57.14%), Query Frame = 3
Query:    3 LQRNISSKNNTKLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYEY 317
            L R  SSK   + PPGP  LP +G L  L  S P V   EL+ KYGP+M LR+G   ++VVSS   A+E+L+   + F SRP+ +      Y+ LD+  +PY  Y
Sbjct:   49 LTRKSSSKK--RRPPGPWNLPLVGGLLHLLRSHPQVALRELASKYGPVMFLRMGQIDTVVVSSPAAAQEVLRDKDVMFASRPSLLVSEIFCYDNLDVGFAPYGAY 151          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71BF_ARATH (Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=CYP71B15 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.438e-14
Identity = 40/99 (40.40%), Postives = 58/99 (58.59%), Query Frame = 3
Query:   12 NISSKNNTKLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPY 308
            N+   +  KLPPGP+ LP IGNLHQ     P      L++ YGP+  L+ GF P + +SS + A+E+LK + L+ CSRP     R   YN  D+ ++P+
Sbjct:   19 NVLKPSKYKLPPGPKKLPIIGNLHQRRTLHPRNRR-NLAEMYGPVALLQYGFVPVVAISSKEAAEEVLKINDLECCSRPEAAGMRATFYNFKDIGMAPF 116          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71AR_ARATH (Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=CYP71A27 PE=2 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 1.878e-14
Identity = 44/93 (47.31%), Postives = 52/93 (55.91%), Query Frame = 3
Query:   36 KLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYE 314
            KLPP P  LP IGNLHQL  + PH     LS +YGPLM L  G  P LVVS   +  +I+KTH L+F +RP   A       G D+   PY E
Sbjct:   32 KLPPSPWRLPVIGNLHQLGPN-PHRYLHSLSLRYGPLMLLHFGRVPVLVVSCPDVTNDIMKTHDLKFANRPKSKAINIFMEGGRDIIFGPYGE 123          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71AF_ARATH (Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=CYP71A15 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.453e-14
Identity = 44/105 (41.90%), Postives = 60/105 (57.14%), Query Frame = 3
Query:    3 LQRNISSKNNTKLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYEY 317
            L R ++  N   LPP P  +P IGNLHQL++  PH     LS +YGPLM L  G  P LVVSS  +A +++KTH L+  +RP       +   G ++  SPY +Y
Sbjct:   23 LNRTVAKDN---LPPSPWRVPVIGNLHQLSLH-PHRSLRSLSHRYGPLMLLHFGRVPILVVSSSDVAHDLMKTHDLKVANRPRLKVIETILNGGREVVFSPYGDY 123          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71BG_ARATH (Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=CYP71B16 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.203e-14
Identity = 40/92 (43.48%), Postives = 56/92 (60.87%), Query Frame = 3
Query:   39 LPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYE 314
            LPP P   P IGNLHQ+    PH  F  L+++ G +M L  GF P  V+SS + A+E+L+TH L+ C+RP  V  R +S    D++ +PY E
Sbjct:   30 LPPSPPTFPVIGNLHQVG-ELPHRSFQRLAERTGHVMLLHFGFVPVTVISSREAAEEVLRTHDLKCCTRPKLVGSRLISRGFKDISFTPYGE 120          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C93A1_SOYBN (Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.184e-14
Identity = 46/111 (41.44%), Postives = 67/111 (60.36%), Query Frame = 3
Query:    3 LQRNISSKNNTKLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA-*VAQRKLSYNGLDLTIS-----PYYEY 317
            L R  S KN   LPP P+ LP IG+LH ++   PH  F++LS ++GP+M L LG  P +V S+ + AKE LKTH + F +RP   VA + L+Y+  D   +     PY+++
Sbjct:   20 LWRKQSKKN---LPPSPKALPIIGHLHLVSPI-PHQDFYKLSTRHGPIMQLFLGSVPCVVASTAEAAKEFLKTHEINFSNRPGQNVAVKGLAYDSQDFLFAFAPFGPYWKF 126          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: F3PH_ARATH (Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana GN=CYP75B1 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.464e-14
Identity = 38/94 (40.43%), Postives = 54/94 (57.45%), Query Frame = 3
Query:   27 NNTKLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPY 308
            +N +LPPGP   P IGNL  +  +KPH     +   YGP++ LRLGF   +V +S  +A++ LK H   F SRP     + ++YN  DL  +PY
Sbjct:   29 HNNRLPPGPNPWPIIGNLPHMG-TKPHRTLSAMVTTYGPILHLRLGFVDVVVAASKSVAEQFLKIHDANFASRPPNSGAKHMAYNYQDLVFAPY 121          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71AN_ARATH (Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=CYP71A23 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.464e-14
Identity = 41/91 (45.05%), Postives = 52/91 (57.14%), Query Frame = 3
Query:   45 PGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYEY 317
            P P  LP IGNLHQL+   PH     LS +YGPLM L  G  P +V S+ + A+++LKTH   F SRP      KL Y   ++  +PY EY
Sbjct:   31 PSPPRLPLIGNLHQLS-QHPHRSLCYLSHRYGPLMLLHFGSVPVIVASTAEAARDVLKTHDRVFASRPRSKIFEKLLYKSRNMASAPYGEY 120          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71B6_ARATH (Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CYP71B6 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.320e-14
Identity = 39/93 (41.94%), Postives = 58/93 (62.37%), Query Frame = 3
Query:   39 LPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYEY 317
            LPPGP  LP +GN+HQL  S PH    +LS KYGP++++ LG   ++VV S + A+E+LK H  + C+RP     +   Y+GL L  + + +Y
Sbjct:   36 LPPGPPRLPILGNIHQLG-SLPHRSLRDLSLKYGPVITVYLGSVRTVVVHSPETAEEVLKLHDSECCTRPKLSITKSFFYDGLGLGFTKWGDY 127          
The following BLAST results are available for this feature:
BLAST of CX294013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
C71AK_ARATH6.455e-1543.00Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
C99A2_ORYSJ1.438e-1441.90Cytochrome P450 99A2 OS=Oryza sativa subsp. japoni... [more]
C71BF_ARATH1.438e-1440.40Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=C... [more]
C71AR_ARATH1.878e-1447.31Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=C... [more]
C71AF_ARATH2.453e-1441.90Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=C... [more]
C71BG_ARATH3.203e-1443.48Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=C... [more]
C93A1_SOYBN4.184e-1441.44Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=... [more]
F3PH_ARATH5.464e-1440.43Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana... [more]
C71AN_ARATH5.464e-1445.05Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=C... [more]
C71B6_ARATH9.320e-1441.94Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionC05004G11SK FlavRip1 Citrus clementina cDNA clone C05004G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294013 ID=CX294013; Name=CX294013; organism=Citrus clementina; type=EST; length=319bp
TTTTGCAGAGGAACATATCCTCAAAAAATAATACTAAATTACCACCAGGC
CCCCGGGGCCTTCCTTTCATCGGTAACTTGCACCAGCTTAATGTCTCAAA
GCCTCACGTATTATTTTGGGAACTGTCAAAAAAATATGGCCCCCTCATGT
CCTTGCGTCTTGGGTTTTCGCCATCCTTAGTAGTTTCCTCAGTGAAAATG
GCTAAAGAGATATTGAAAACTCATGGCCTTCAATTTTGCAGCAGGCCAGC
CTAAGTAGCTCAACGAAAGTTATCTTACAATGGTCTTGATTTAACAATTT
CACCCTATTATGAATATTG
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