CX294013

Overview
NameCX294013
Unique NameCX294013
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length319
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C82A3_SOYBN (Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.139e-11
Identity = 36/86 (41.86%), Postives = 55/86 (63.95%), Query Frame = 3
Query:   63 PFIGNLHQLNVSK-PHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYEY 317
            P +G+L  LN S+ PH +   L+ KYGPL +++LG  P+LV+S+ +M+KE+  T+ L   SRP  VA   +SYN   + ++PY  Y
Sbjct:   46 PILGHLSLLNGSQTPHKVLGALADKYGPLFTIKLGMKPALVLSNWEMSKELFTTNDLAVSSRPKLVAVEVMSYNQAFVGLAPYGPY 131          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: CP2J6_MOUSE (Cytochrome P450 2J6 OS=Mus musculus GN=Cyp2j6 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.488e-11
Identity = 36/83 (43.37%), Postives = 50/83 (60.24%), Query Frame = 3
Query:   42 PPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLS-YNGL 287
            PPGP GLPF+GN+ QL+  +PH+    L KKYG + SL LG   S+V++ + + KE L        +RP  V Q ++S  NGL
Sbjct:   44 PPGPWGLPFVGNIFQLDFGQPHLSIQPLVKKYGNIFSLNLGDITSVVITGLPLIKEALTQMEQNIMNRPLSVMQERISNKNGL 126          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C76A2_SOLME (Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.488e-11
Identity = 36/101 (35.64%), Postives = 62/101 (61.39%), Query Frame = 3
Query:    6 QRNISSKNNTKLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPY 308
            Q+N ++K++ K PPGP GLP  GN+ +L  ++P+     L +KYGP++ L+LG + ++VV + + ++E+ K H + F +R      +  SY    L I+PY
Sbjct:   25 QKN-TTKSSYKFPPGPPGLPIFGNMFELG-TEPYKKMAVLRQKYGPVLWLKLGSTYTMVVQTAQASEELFKNHDISFANRVIPDVNQAHSYYQGSLAIAPY 123          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C75A7_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A7 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.488e-11
Identity = 36/91 (39.56%), Postives = 51/91 (56.04%), Query Frame = 3
Query:   36 KLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPY 308
            +LPPGP G P +G L  L  + PHV    ++KKYGP+M L++G     V S+ + AK  LKT  + F +RP       L+YN  D+  + Y
Sbjct:   36 RLPPGPIGWPVLGALRLLG-TMPHVALANMAKKYGPVMYLKVGSCGLAVASTPEAAKAFLKTLDMNFSNRPPNAGATHLAYNAQDMVFADY 125          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C75A5_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A5 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.538e-11
Identity = 36/91 (39.56%), Postives = 51/91 (56.04%), Query Frame = 3
Query:   36 KLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPY 308
            +LPPGP G P +G L  L  + PHV    ++KKYGP+M L++G     V S+ + AK  LKT  + F +RP       L+YN  D+  + Y
Sbjct:   36 RLPPGPIGWPVLGALPLLG-TMPHVALANMAKKYGPVMYLKVGSCGLAVASTPEAAKAFLKTLDMNFSNRPPNAGATHLAYNAQDMVFADY 125          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C75A4_GENTR (Flavonoid 3',5'-hydroxylase OS=Gentiana triflora GN=CYP75A4 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.315e-11
Identity = 36/91 (39.56%), Postives = 50/91 (54.95%), Query Frame = 3
Query:   36 KLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPY 308
            +LPPGP G P +G L  L  + PHV F  ++KKYG +M L++G     + S+   AK  LKT  L F +RP       L+YN  D+  + Y
Sbjct:   40 RLPPGPTGWPILGALPLLG-NMPHVTFANMAKKYGSVMYLKVGSHGLAIASTPDAAKAFLKTLDLNFSNRPPNAGATHLAYNAQDMVFAHY 129          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71C1_MAIZE (Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.315e-11
Identity = 40/97 (41.24%), Postives = 57/97 (58.76%), Query Frame = 3
Query:   36 KLPPGPRG-LPFIGNLHQLNVSKPHVLFWELSKKYGP--LMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYEY 317
            +LPP P G LP IG+LH +  S PHV F +L  KYG   LM +++G  P++VVS+ + A+ +L+TH     SRP       + YN  D+  +PY  Y
Sbjct:   54 RLPPTPPGKLPIIGHLHLIG-SHPHVSFRDLHAKYGHNGLMLVQVGAVPTIVVSTPQAAEAVLRTHDHVLASRPRNPVADIIRYNSTDVAFAPYGVY 149          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.385e-11
Identity = 35/91 (38.46%), Postives = 56/91 (61.54%), Query Frame = 3
Query:   36 KLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPY 308
            +LPPGPR  P +GNL Q+   +    F E +++YGP++S+  G   ++VVS+ ++AKE+LK +  Q   RP   + ++ S NG DL  + Y
Sbjct:   30 RLPPGPRPWPVLGNLRQIKPIRCRC-FQEWAERYGPVISVWFGSGLTVVVSTSELAKEVLKENDQQLADRPRNRSTQRFSRNGQDLIWADY 119          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C76B1_HELTU (7-ethoxycoumarin O-deethylase OS=Helianthus tuberosus GN=CYP76B1 PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.385e-11
Identity = 35/69 (50.72%), Postives = 46/69 (66.67%), Query Frame = 3
Query:   39 LPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSR 245
            LPPGP  LP IGNLH L  + PH    +L+K +GP+MSL+LG   +LV+SS   A+E+LK   L F +R
Sbjct:   28 LPPGPTRLPIIGNLHLLG-ALPHQSLAKLAKIHGPIMSLQLGQITTLVISSATAAEEVLKKQDLAFSTR 95          
BLAST of CX294013 vs. ExPASy Swiss-Prot
Match: C71DI_MENSP (Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.385e-11
Identity = 36/99 (36.36%), Postives = 56/99 (56.57%), Query Frame = 3
Query:   21 SKNNTKLPPGPRGLPFIGNLHQLNVSKPHVLFWELSKKYGPLMSLRLGFSPSLVVSSVKMAKEILKTHGLQFCSRPA*VAQRKLSYNGLDLTISPYYEY 317
            SK+   LPP P  LP IG+LH L    P  +F  +++KYGP+  ++LG   S+V+SS + AK+ +K     F  R   +  R + Y+  D+  SPY ++
Sbjct:   28 SKSQQNLPPSPPKLPVIGHLHFLWGGLPQHVFRSIAQKYGPVAHVQLGEVYSVVLSSAEAAKQAMKVLDPNFADRFDGIGSRTMWYDKDDIIFSPYNDH 126          
The following BLAST results are available for this feature:
BLAST of CX294013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
C82A3_SOYBN1.139e-1141.86Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=... [more]
CP2J6_MOUSE1.488e-1143.37Cytochrome P450 2J6 OS=Mus musculus GN=Cyp2j6 PE=2... [more]
C76A2_SOLME1.488e-1135.64Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76... [more]
C75A7_EUSGR1.488e-1139.56Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C75A5_EUSGR2.538e-1139.56Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C75A4_GENTR3.315e-1139.56Flavonoid 3',5'-hydroxylase OS=Gentiana triflora G... [more]
C71C1_MAIZE3.315e-1141.24Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 S... [more]
C98A1_SORBI7.385e-1138.46Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C76B1_HELTU7.385e-1150.727-ethoxycoumarin O-deethylase OS=Helianthus tubero... [more]
C71DI_MENSP7.385e-1136.36Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D1... [more]

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Properties
Property NameValue
Genbank descriptionC05004G11SK FlavRip1 Citrus clementina cDNA clone C05004G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294013 ID=CX294013; Name=CX294013; organism=Citrus clementina; type=EST; length=319bp
TTTTGCAGAGGAACATATCCTCAAAAAATAATACTAAATTACCACCAGGC
CCCCGGGGCCTTCCTTTCATCGGTAACTTGCACCAGCTTAATGTCTCAAA
GCCTCACGTATTATTTTGGGAACTGTCAAAAAAATATGGCCCCCTCATGT
CCTTGCGTCTTGGGTTTTCGCCATCCTTAGTAGTTTCCTCAGTGAAAATG
GCTAAAGAGATATTGAAAACTCATGGCCTTCAATTTTGCAGCAGGCCAGC
CTAAGTAGCTCAACGAAAGTTATCTTACAATGGTCTTGATTTAACAATTT
CACCCTATTATGAATATTG
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