CX294026

Overview
NameCX294026
Unique NameCX294026
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length602
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294026 vs. ExPASy Swiss-Prot
Match: BEV1K_BETVE (Major pollen allergen Bet v 1-K OS=Betula verrucosa GN=BETV1K PE=1 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 1.708e-32
Identity = 73/162 (45.06%), Postives = 103/162 (63.58%), Query Frame = 1
Query:   61 MGVLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYETKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANPMPYS 546
            MGV    +E TS +P  +LFK F+L  DTL+PKV PQ + +VE I G+GGPG+IKK  F EG+ +KY K RVD +D  N  Y+Y+ I  EG A   T++ +  E K+V TPDGGS   +  K++ K   E+K E +KA  EK + + +A+E+Y LA+   Y+
Sbjct:    1 MGVFNYESETTSVIPAARLFKAFILEGDTLIPKVAPQAISSVENIEGNGGPGTIKKITFPEGSPFKYVKERVDEVDHANFKYSYSMI--EGGALGDTLEKICNEIKIVATPDGGSILKISNKYHTKGDHEMKAEHMKAIKEKGEALLRAVESYLLAHSDAYN 160          
BLAST of CX294026 vs. ExPASy Swiss-Prot
Match: BEV1B_BETVE (Major pollen allergen Bet v 1-B OS=Betula verrucosa GN=BETV1B PE=1 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 2.231e-32
Identity = 73/162 (45.06%), Postives = 102/162 (62.96%), Query Frame = 1
Query:   61 MGVLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYETKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANPMPYS 546
            MGV     E TS +P  +LFK F+L  DTL+PKV PQ + +VE I G+GGPG+IKK  F EG+ +KY K RVD +D  N  Y+Y+ I  EG A   T++ +  E K+V TPDGGS   +  K++ K   E+K E +KA  EK + + +A+E+Y LA+   Y+
Sbjct:    1 MGVFNYETETTSVIPAARLFKAFILEGDTLIPKVAPQAISSVENIEGNGGPGTIKKITFPEGSPFKYVKERVDEVDHANFKYSYSMI--EGGALGDTLEKICNEIKIVATPDGGSILKISNKYHTKGDHEMKAEHMKAIKEKGEALLRAVESYLLAHSDAYN 160          
BLAST of CX294026 vs. ExPASy Swiss-Prot
Match: MPAG1_ALNGL (Major pollen allergen Aln g 1 OS=Alnus glutinosa PE=1 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 4.970e-32
Identity = 76/164 (46.34%), Postives = 101/164 (61.59%), Query Frame = 1
Query:   61 MGVLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEG--EGDANIPTIDHVSYETKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANPMPYS 546
            MGV    AE  S +P  +LFK F+L  D LLPKV P+ V +VE I G+GGPG+IKK  F EG+ +KY K RVD +D+ N  Y+++ IEG   GDA    ++ V  E K+V  PDGGS   +  KF+ K   EI  EQ+K   EK  G+ KA+E+Y LA+   Y+
Sbjct:    1 MGVFNYEAETPSVIPAARLFKAFILDGDKLLPKVAPEAVSSVENIEGNGGPGTIKKITFPEGSPFKYVKERVDEVDRVNFKYSFSVIEGGAVGDA----LEKVCNEIKIVAAPDGGSILKISNKFHTKGDHEINAEQIKIEKEKAVGLLKAVESYLLAHSDAYN 160          
BLAST of CX294026 vs. ExPASy Swiss-Prot
Match: BEV1M_BETVE (Major pollen allergen Bet v 1-M/N OS=Betula verrucosa GN=BETV1M PE=1 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 8.478e-32
Identity = 72/162 (44.44%), Postives = 102/162 (62.96%), Query Frame = 1
Query:   61 MGVLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYETKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANPMPYS 546
            MGV    +E TS +P  +LFK F+L  D L+PKV PQ + +VE I G+GGPG+IKK  F EG+ +KY K RVD +D  N  Y+Y+ I  EG A   T++ +  E K+V TPDGGS   +  K++ K   E+K E +KA  EK + + +A+E+Y LA+   Y+
Sbjct:    1 MGVFNYESETTSVIPAARLFKAFILDGDNLIPKVAPQAISSVENIEGNGGPGTIKKITFPEGSPFKYVKERVDEVDHANFKYSYSMI--EGGALGDTLEKICNEIKIVATPDGGSILKISNKYHTKGDHEMKAEHMKAIKEKGEALLRAVESYLLAHSDAYN 160          
BLAST of CX294026 vs. ExPASy Swiss-Prot
Match: BEV1J_BETVE (Major pollen allergen Bet v 1-J OS=Betula verrucosa GN=BETV1J PE=1 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 1.107e-31
Identity = 73/164 (44.51%), Postives = 102/164 (62.20%), Query Frame = 1
Query:   61 MGVLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEG--EGDANIPTIDHVSYETKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANPMPYS 546
            MGV     E TS +P  +LFK F+L  D L PKV PQ + +VE I G+GGPG+IKK +F EG  +KY K RVD +D  N  Y+Y+ IEG   GD    T++ +S E K+V TP+GGS   +  K++ K   E+K EQ+KA  E  + + +A+E+Y LA+   Y+
Sbjct:    1 MGVFNYETEATSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPEGFPFKYVKDRVDEVDHTNFKYSYSVIEGGPVGD----TLEKISNEIKIVATPNGGSILKINNKYHTKGDHEVKAEQIKASKEMGETLLRAVESYLLAHSDAYN 160          
BLAST of CX294026 vs. ExPASy Swiss-Prot
Match: BEV1E_BETVE (Major pollen allergen Bet v 1-E OS=Betula verrucosa GN=BETV1E PE=1 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 1.107e-31
Identity = 73/164 (44.51%), Postives = 102/164 (62.20%), Query Frame = 1
Query:   61 MGVLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEG--EGDANIPTIDHVSYETKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANPMPYS 546
            MGV     E TS +P  +LFK F+L  D L PKV PQ + +VE I G+GGPG+IKK +F EG  +KY K RVD +D  N  Y+Y+ IEG   GD    T++ +S E K+V TP+GGS   +  K++ K   E+K EQ+KA  E  + + +A+E+Y LA+   Y+
Sbjct:    1 MGVFNYETEATSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPEGIPFKYVKGRVDEVDHTNFKYSYSVIEGGPVGD----TLEKISNEIKIVATPNGGSILKINNKYHTKGDHEVKAEQIKASKEMGETLLRAVESYLLAHSDAYN 160          
BLAST of CX294026 vs. ExPASy Swiss-Prot
Match: BEV1F_BETVE (Major pollen allergen Bet v 1-F/I OS=Betula verrucosa GN=BETV1F PE=1 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 1.446e-31
Identity = 73/164 (44.51%), Postives = 102/164 (62.20%), Query Frame = 1
Query:   61 MGVLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEG--EGDANIPTIDHVSYETKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANPMPYS 546
            MGV     E TS +P  +LFK F+L  D L PKV PQ + +VE I G+GGPG+IKK +F EG  +KY K RVD +D  N  Y+Y+ IEG   GD    T++ +S E K+V TP+GGS   +  K++ K   E+K EQ+KA  E  + + +A+E+Y LA+   Y+
Sbjct:    1 MGVFNYEIEATSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPEGFPFKYVKDRVDEVDHTNFKYSYSVIEGGPVGD----TLEKISNEIKIVATPNGGSILKINNKYHTKGDHEVKAEQIKASKEMGETLLRAVESYLLAHSDAYN 160          
BLAST of CX294026 vs. ExPASy Swiss-Prot
Match: PR1_MEDSA (Class-10 pathogenesis-related protein 1 OS=Medicago sativa GN=MSPR10-1 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.467e-31
Identity = 66/158 (41.77%), Postives = 100/158 (63.29%), Query Frame = 1
Query:   61 MGVLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYETKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANP 534
            MGV     E TS + P +L+K  V   D L+PKV+   ++++E++ G+GG G+IKK  FVEG + KY  H+VD +D  N  YNY+ + G G  +  T++ +S+E+K+   PDGGS + + +K++ K  A   EE++K G  +  G+FKALE Y LANP
Sbjct:    1 MGVFNFEDETTSIVAPARLYKALVTDSDNLIPKVI-DAIQSIEIVEGNGGAGTIKKLTFVEGGETKYDLHKVDLVDDVNFAYNYSIVGGGGLPD--TVEKISFESKLSAGPDGGSTAKLTVKYFTKGDAAPSEEEIKGGKARGDGLFKALEGYVLANP 155          
BLAST of CX294026 vs. ExPASy Swiss-Prot
Match: MPAC2_CARBE (Major pollen allergen Car b 1 isoform 2 OS=Carpinus betulus PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 9.374e-31
Identity = 71/164 (43.29%), Postives = 100/164 (60.98%), Query Frame = 1
Query:   61 MGVLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGE--GDANIPTIDHVSYETKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANPMPYS 546
            MGV    AE TS +P  +LFK F+L  + L+PKV PQ V +VE + G+GGPG+IKK  F EG+  KY K RV+ +D  N  YNYT IEG+  GD     ++ VS+E K+V  P GGS   +  KF+ K   E+  E++K   E  + + +A+E+Y LA+   Y+
Sbjct:    1 MGVFNYEAETTSVIPAARLFKAFILDGNKLIPKVSPQAVSSVENVEGNGGPGTIKKITFSEGSPVKYVKERVEEIDHTNFKYNYTVIEGDVLGD----KLEKVSHELKIVAAPGGGSIVKISSKFHAKGYHEVNAEEMKGAKEMAEKLLRAVESYLLAHTAEYN 160          
BLAST of CX294026 vs. ExPASy Swiss-Prot
Match: ABR18_PEA (ABA-responsive protein ABR18 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 9.374e-31
Identity = 67/158 (42.41%), Postives = 102/158 (64.56%), Query Frame = 1
Query:   61 MGVLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYETKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANP 534
            MGV T   + TST+PP KLFK  V   D ++PKV+  + K VE++ G+GGPG++KK  FVEG    Y  H+V+A+D     YNY+ + G G ++I  ++ +S+E K+   P+GGS   +++K++ K  A+  E++V+ G  K   +FKA+EAY LANP
Sbjct:    1 MGVFTYENDTTSTVPPAKLFKAVVHDADLIVPKVVDSI-KTVEILEGNGGPGTVKKLTFVEGGQTLYVLHKVEAIDDAKFEYNYSIVGGVGISDI--VEKISFEAKLFEGPNGGSVGKMIVKYHTKGDAKPIEKEVEEGKAKGDALFKAIEAYVLANP 155          
The following BLAST results are available for this feature:
BLAST of CX294026 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
BEV1K_BETVE1.708e-3245.06Major pollen allergen Bet v 1-K OS=Betula verrucos... [more]
BEV1B_BETVE2.231e-3245.06Major pollen allergen Bet v 1-B OS=Betula verrucos... [more]
MPAG1_ALNGL4.970e-3246.34Major pollen allergen Aln g 1 OS=Alnus glutinosa P... [more]
BEV1M_BETVE8.478e-3244.44Major pollen allergen Bet v 1-M/N OS=Betula verruc... [more]
BEV1J_BETVE1.107e-3144.51Major pollen allergen Bet v 1-J OS=Betula verrucos... [more]
BEV1E_BETVE1.107e-3144.51Major pollen allergen Bet v 1-E OS=Betula verrucos... [more]
BEV1F_BETVE1.446e-3144.51Major pollen allergen Bet v 1-F/I OS=Betula verruc... [more]
PR1_MEDSA2.467e-3141.77Class-10 pathogenesis-related protein 1 OS=Medicag... [more]
MPAC2_CARBE9.374e-3143.29Major pollen allergen Car b 1 isoform 2 OS=Carpinu... [more]
ABR18_PEA9.374e-3142.41ABA-responsive protein ABR18 OS=Pisum sativum PE=2... [more]

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Properties
Property NameValue
Genbank descriptionC05005A02SK FlavRip1 Citrus clementina cDNA clone C05005A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294026 ID=CX294026; Name=CX294026; organism=Citrus clementina; type=EST; length=602bp
TCCCAATTTCAGTTGATCGATAGTTTTCATATTCTTTCTTTGTTTAACTC
TTAGACAATCATGGGTGTTCTCACGTTGAATGCAGAGGAAACAAGCACTC
TCCCCCCTGAAAAGTTGTTCAAACTTTTTGTCCTTCATTTCGACACCCTT
CTGCCCAAAGTCCTGCCTCAGGTTGTAAAGAACGTTGAATTGATTTCAGG
GGATGGAGGCCCTGGAAGCATCAAGAAGTTTAACTTTGTTGAAGGTGCTG
ATTGGAAGTACTTTAAGCATAGGGTTGATGCATTGGACAAAGAGAACAAG
ATATACAATTACACGGCAATTGAAGGTGAGGGTGATGCTAACATCCCTAC
TATTGATCATGTTTCTTATGAGACTAAGGTTGTGGGCACCCCTGACGGAG
GAAGCAAGAGCACCGTTGTTATCAAGTTCTATCCCAAACCAGGTGCCGAG
ATTAAGGAAGAGCAGGTTAAGGCAGGCTTGGAAAAGGAGAAGGGAATTTT
TAAGGCTCTGGAAGCCTATGCCTTGGCAAACCCGATGCCGTATAGCTCTA
CATCAACCTTCACCGATTGCGTCGCCTTGTTGCACATTATGATATATGTT
AT
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