CX294026

Overview
NameCX294026
Unique NameCX294026
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length602
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294026 vs. ExPASy Swiss-Prot
Match: MPAC1_CARBE (Major pollen allergen Car b 1 isoforms 1A and 1B OS=Carpinus betulus PE=1 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 1.599e-30
Identity = 70/164 (42.68%), Postives = 99/164 (60.37%), Query Frame = 1
Query:   61 MGVLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGE--GDANIPTIDHVSYETKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANPMPYS 546
            MGV    AE  S +P  +LFK +VL  D L+PKV PQV+ +VE + G+GGPG+IK   F EG  +K+ K RVD +D  N  YNYT IEG+  GD     ++ VS+E K+V  P GGS   +  KF+ K   E+  E++K   E  + + +A+E+Y LA+   Y+
Sbjct:    1 MGVFNYEAETPSVIPAARLFKSYVLDGDKLIPKVAPQVISSVENVGGNGGPGTIKNITFAEGIPFKFVKERVDEVDNANFKYNYTVIEGDVLGD----KLEKVSHELKIVAAPGGGSIVKISSKFHAKGYHEVNAEKMKGAKEMAEKLLRAVESYLLAHTAEYN 160          
BLAST of CX294026 vs. ExPASy Swiss-Prot
Match: MPAC1_CORAV (Major pollen allergen Cor a 1 isoforms 5, 6, 11 and 16 OS=Corylus avellana PE=1 SV=3)

HSP 1 Score: 128.257 bits (321), Expect = 3.015e-29
Identity = 68/164 (41.46%), Postives = 96/164 (58.54%), Query Frame = 1
Query:   61 MGVLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGE--GDANIPTIDHVSYETKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANPMPYS 546
            MGV     E  S +P  +LFK +VL  D L+PKV PQ + +VE + G+GGPG+IK   F EG+ +KY K RVD +D  N  Y+YT IEG+  GD     ++ V +E K+V  P GGS   +  KF+ K   EI  E++K   E  + + +A+E Y LA+   Y+
Sbjct:    1 MGVFNYEVETPSVIPAARLFKSYVLDGDKLIPKVAPQAITSVENVEGNGGPGTIKNITFGEGSRYKYVKERVDEVDNTNFTYSYTVIEGDVLGD----KLEKVCHELKIVAAPGGGSILKISSKFHAKGDHEINAEEMKGAKEMAEKLLRAVETYLLAHSAEYN 160          
BLAST of CX294026 vs. ExPASy Swiss-Prot
Match: DRR4_PEA (Disease resistance response protein DRRG49-C OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 6.718e-29
Identity = 66/158 (41.77%), Postives = 96/158 (60.76%), Query Frame = 1
Query:   61 MGVLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYETKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANP 534
            MGV     E TS + P  L K  V   D L PKV+   +K++E++ G+GGPG+IKK  FVE  + KY  H+V+ +D  N   NY+ + G G  +  T++ +S+E K+   P+GGS + + +K+Y K  A   EE++K G  K +GIFKALE Y +ANP
Sbjct:    1 MGVFNFEEEATSIVAPATLHKALVTDADILTPKVI-DAIKSIEIVEGNGGPGTIKKLTFVEDGETKYVLHKVELVDDANWANNYSIVGGVGLPD--TVEKISFEAKLSAGPNGGSIAKLSVKYYTKGDAIPSEEEIKNGKAKGEGIFKALEGYCVANP 155          
BLAST of CX294026 vs. ExPASy Swiss-Prot
Match: PR1_PHAVU (Pathogenesis-related protein 1 OS=Phaseolus vulgaris PE=1 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 9.700e-28
Identity = 61/158 (38.61%), Postives = 98/158 (62.03%), Query Frame = 1
Query:   61 MGVLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYETKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANP 534
            MGV T   + TS + P  L+K      DT+ PK LP   K+VE++ G+GGPG+IKK +FVE  + K+  H+++++D+ N  Y+Y+ + G   A   T + +++++K+   P+GGS   + I ++ K  A   E+++KAG  K   +FKA+EAY LANP
Sbjct:    1 MGVFTFEDQTTSPVAPATLYKAVAKDADTIFPKALPDSFKSVEIVEGNGGPGTIKKISFVEDGETKFVLHKIESIDEANLGYSYSIVGGV--ALPETAEKITFDSKLSDGPNGGSLIKLSITYHSKGDAPPNEDELKAGKAKSDSLFKAVEAYLLANP 156          
BLAST of CX294026 vs. ExPASy Swiss-Prot
Match: DRR3_PEA (Disease resistance response protein Pi49 OS=Pisum sativum GN=DRR49A PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.161e-27
Identity = 63/158 (39.87%), Postives = 96/158 (60.76%), Query Frame = 1
Query:   61 MGVLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYETKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANP 534
            MGV  +  E TS + P  L+K  V   D L PKV+   +K++E++ G+GG G+IKK  FVE  + K+  H+V+ +D  N  YNY+ + G G  +  T++ +S+E K+   P+GGS + + +K++ K  A   EEQ+K    K  G+FKALE Y LA+P
Sbjct:    1 MGVFNVEDEITSVVAPAILYKALVTDADNLTPKVI-DAIKSIEIVEGNGGAGTIKKLTFVEDGETKHVLHKVELVDVANLAYNYSIVGGVGFPD--TVEKISFEAKLSAGPNGGSIAKLSVKYFTKGDAAPSEEQLKTDKAKGDGLFKALEGYCLAHP 155          
BLAST of CX294026 vs. ExPASy Swiss-Prot
Match: IPRT1_CATRO (Probable intracellular pathogenesis-related protein T1 OS=Catharanthus roseus GN=PCKR3 PE=1 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 2.822e-27
Identity = 69/159 (43.40%), Postives = 97/159 (61.01%), Query Frame = 1
Query:   61 MGVLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYETKVVGTPDG-GSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANP 534
            MGV++ + E  S+L   KLFK FVL   TL+ K LP V+K+VE++ GDGG G+IK  +F EG      KH V+ LDK+N  Y Y+ ++GE  A +P +  +SY  K+   P G GS       F+ K G+ I E+++KAG E+   + KA+EAY  ANP
Sbjct:    1 MGVISYDMEIKSSLSAAKLFKAFVLDVGTLINKALPNVIKSVEILQGDGGAGTIKLVHFGEGGPVPSVKHHVEELDKDNMSYKYSIVDGE--ALMPGLQSISYVIKI--EPSGHGSVCKHNTTFHFKAGSNINEDEIKAGKERAAEMIKAVEAYVQANP 155          
BLAST of CX294026 vs. ExPASy Swiss-Prot
Match: DRR1_PEA (Disease resistance response protein Pi176 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.686e-27
Identity = 65/159 (40.88%), Postives = 98/159 (61.64%), Query Frame = 1
Query:   61 MGVLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYETKVVGTPDGGSKSTVVIKFYPK-PGAEIKEEQVKAGLEKEKGIFKALEAYALANP 534
            MGV  +  E TS + P  L+K  V   DTL PKV+   +K++E++ G+GG G+IKK  FVE  + K+  H+V+ +D  N  YNY+ + G G  +  T++ +S+E K+   P+GGS + + +K+Y K   A   EEQ+K+   K  G+FKALE Y LA+P
Sbjct:    1 MGVFNVEDEITSVVAPAILYKALVTDADTLTPKVI-DAIKSIEIVEGNGGAGTIKKLTFVEDGETKHVLHKVELVDVANLAYNYSIVGGVGFPD--TVEKISFEAKLSAGPNGGSIAKLSVKYYTKGDAAAPTEEQLKSDKAKGDGLFKALERYCLAHP 156          
BLAST of CX294026 vs. ExPASy Swiss-Prot
Match: PR2_PETCR (Pathogenesis-related protein 2 OS=Petroselinum crispum GN=PR2 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 5.323e-26
Identity = 68/163 (41.72%), Postives = 100/163 (61.35%), Query Frame = 1
Query:   61 MGVLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYETKVVGTPDGGS--KSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANPMPY 543
            MG +T + E  S++P + ++K F+L  D ++PKVLPQ +K++E+ISGDGG G+IKK    E + +   K R+D +D E   Y+Y+ I  EGD  +  I+ ++ +  VV T DGG   K+T +  + P   A I EE VK   E+   +FKA+EAY LANP  Y
Sbjct:    1 MGAVTTDVEVASSVPAQTIYKGFLLDMDNIIPKVLPQAIKSIEIISGDGGAGTIKKVTLGEVSQFTVVKQRIDEIDAEALKYSYSII--EGDLLLGIIESITSKFTVVPT-DGGCIVKNTTI--YTPIGDAVIPEENVKEATEQSGMVFKAIEAYLLANPGAY 158          
BLAST of CX294026 vs. ExPASy Swiss-Prot
Match: SAM22_SOYBN (Stress-induced protein SAM22 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 9.079e-26
Identity = 59/159 (37.11%), Postives = 98/159 (61.64%), Query Frame = 1
Query:   61 MGVLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIP-TIDHVSYETKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANP 534
            MGV T   E  S + P  L+K  V   D ++PK L    K+VE + G+GGPG+IKK  F+E  + K+  H+++++D+ N  Y+Y+ +   G A +P T + +++++K+V  P+GGS   + +K+  K  AE  ++++K G  K   +FKA+EAY LA+P
Sbjct:    1 MGVFTFEDEINSPVAPATLYKALVTDADNVIPKALDSF-KSVENVEGNGGPGTIKKITFLEDGETKFVLHKIESIDEANLGYSYSVV---GGAALPDTAEKITFDSKLVAGPNGGSAGKLTVKYETKGDAEPNQDELKTGKAKADALFKAIEAYLLAHP 155          
BLAST of CX294026 vs. ExPASy Swiss-Prot
Match: PR2_PHAVU (Pathogenesis-related protein 2 OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 9.079e-26
Identity = 61/159 (38.36%), Postives = 98/159 (61.64%), Query Frame = 1
Query:   61 MGVLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIP-TIDHVSYETKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANP 534
            M V T   + TS + P  L+K  V   DT++PK +    K+VE++ G+GGPG+IKK +FVE  + K+  H+++ +D+ N  Y+Y+ +   G A +P T + +S ++K+   P+GGS   + IK++ K  A   E+++KAG  K   +FK +EAY LANP
Sbjct:    1 MAVFTFEDQTTSPVAPATLYKALVKDADTIVPKAVDSF-KSVEIVEGNGGPGTIKKISFVEDGETKFVLHKIEEIDEANLGYSYSIV---GGAALPDTAEKISIDSKLSDGPNGGSVVKLSIKYHSKGDAPPNEDELKAGKAKSDALFKVIEAYLLANP 155          
The following BLAST results are available for this feature:
BLAST of CX294026 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
MPAC1_CARBE1.599e-3042.68Major pollen allergen Car b 1 isoforms 1A and 1B O... [more]
MPAC1_CORAV3.015e-2941.46Major pollen allergen Cor a 1 isoforms 5, 6, 11 an... [more]
DRR4_PEA6.718e-2941.77Disease resistance response protein DRRG49-C OS=Pi... [more]
PR1_PHAVU9.700e-2838.61Pathogenesis-related protein 1 OS=Phaseolus vulgar... [more]
DRR3_PEA2.161e-2739.87Disease resistance response protein Pi49 OS=Pisum ... [more]
IPRT1_CATRO2.822e-2743.40Probable intracellular pathogenesis-related protei... [more]
DRR1_PEA3.686e-2740.88Disease resistance response protein Pi176 OS=Pisum... [more]
PR2_PETCR5.323e-2641.72Pathogenesis-related protein 2 OS=Petroselinum cri... [more]
SAM22_SOYBN9.079e-2637.11Stress-induced protein SAM22 OS=Glycine max PE=1 S... [more]
PR2_PHAVU9.079e-2638.36Pathogenesis-related protein 2 OS=Phaseolus vulgar... [more]

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Properties
Property NameValue
Genbank descriptionC05005A02SK FlavRip1 Citrus clementina cDNA clone C05005A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294026 ID=CX294026; Name=CX294026; organism=Citrus clementina; type=EST; length=602bp
TCCCAATTTCAGTTGATCGATAGTTTTCATATTCTTTCTTTGTTTAACTC
TTAGACAATCATGGGTGTTCTCACGTTGAATGCAGAGGAAACAAGCACTC
TCCCCCCTGAAAAGTTGTTCAAACTTTTTGTCCTTCATTTCGACACCCTT
CTGCCCAAAGTCCTGCCTCAGGTTGTAAAGAACGTTGAATTGATTTCAGG
GGATGGAGGCCCTGGAAGCATCAAGAAGTTTAACTTTGTTGAAGGTGCTG
ATTGGAAGTACTTTAAGCATAGGGTTGATGCATTGGACAAAGAGAACAAG
ATATACAATTACACGGCAATTGAAGGTGAGGGTGATGCTAACATCCCTAC
TATTGATCATGTTTCTTATGAGACTAAGGTTGTGGGCACCCCTGACGGAG
GAAGCAAGAGCACCGTTGTTATCAAGTTCTATCCCAAACCAGGTGCCGAG
ATTAAGGAAGAGCAGGTTAAGGCAGGCTTGGAAAAGGAGAAGGGAATTTT
TAAGGCTCTGGAAGCCTATGCCTTGGCAAACCCGATGCCGTATAGCTCTA
CATCAACCTTCACCGATTGCGTCGCCTTGTTGCACATTATGATATATGTT
AT
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