CX294026

Overview
NameCX294026
Unique NameCX294026
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length602
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294026 vs. ExPASy Swiss-Prot
Match: L18A_LUPLU (Protein LlR18A OS=Lupinus luteus GN=LLR18A PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 5.885e-25
Identity = 59/158 (37.34%), Postives = 96/158 (60.76%), Query Frame = 1
Query:   61 MGVLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYETKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANP 534
            MG+     E++ST+ P KL+K      D ++PKV+ + +++VE++ G+GGPG+IKK   +      +  H++DA+D+ N  YNY+ I GEG     +++ +SYE+K++  PDGGS   + +KF+ K G  + E        K  G+FKA+E Y LA+P
Sbjct:    1 MGIFAFENEQSSTVAPAKLYKALTKDSDEIVPKVI-EPIQSVEIVEGNGGPGTIKKIIAIHDGHTSFVLHKLDAIDEANLTYNYSIIGGEGLDE--SLEKISYESKILPGPDGGSIGKINVKFHTK-GDVLSETVRDQAKFKGLGLFKAIEGYVLAHP 154          
BLAST of CX294026 vs. ExPASy Swiss-Prot
Match: PRS2_SOLTU (Pathogenesis-related protein STH-2 OS=Solanum tuberosum GN=STH-2 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.110e-23
Identity = 62/164 (37.80%), Postives = 96/164 (58.54%), Query Frame = 1
Query:   61 MGVLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGE--GDANIPTIDHVSYETKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANPMPYS 546
            MGV +   E T+ + P +LFK  V+  D L+PK++PQV KN+E      G GSIKK NFVEG+  KY KH++  +D +N +  Y+ IEG+  GD     ++ +SY+ K     +GG     + +++ K    +K+E+   G ++   +FK +EAY LANP  Y+
Sbjct:    1 MGVTSYTHETTTPIAPTRLFKALVVDSDNLIPKLMPQV-KNIEA----EGDGSIKKMNFVEGSPIKYLKHKIHVVDDKNLVTKYSMIEGDVLGD----KLESISYDLKFEAHGNGGCVCKSITEYHTKGDYVLKDEEHNEGQKQGMELFKIVEAYLLANPSVYA 155          
BLAST of CX294026 vs. ExPASy Swiss-Prot
Match: RNS1_PANGI (Ribonuclease 1 OS=Panax ginseng PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.893e-23
Identity = 64/158 (40.51%), Postives = 89/158 (56.33%), Query Frame = 1
Query:   64 GVLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYETKVVGTPDGGS--KSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALAN 531
            GV     E TST+P +KL+   +L  D +LPK  PQ +K+ E+I GDGG G++K     E + +   K R+DA+DK+   Y Y+ I   GD  +  I+ +     +V TPDGGS  K+T +  +     A I EE +K   EK   IFKA+EAY LAN
Sbjct:    1 GVQKTEVEATSTVPAQKLYAGLLLDIDDILPKAFPQAIKSSEIIEGDGGVGTVKLVTLGEASQFNTMKQRIDAIDKDALTYTYSII--GGDILLDIIESIVNHFTIVPTPDGGSIVKNTTI--YNTIGDAVIPEENIKDATEKAGLIFKAVEAYLLAN 154          
BLAST of CX294026 vs. ExPASy Swiss-Prot
Match: L18B_LUPLU (Protein LlR18B OS=Lupinus luteus GN=LLR18B PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.229e-23
Identity = 57/160 (35.62%), Postives = 94/160 (58.75%), Query Frame = 1
Query:   61 MGVLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYETKVVGTPDGGSKSTVVIKFYPKPG--AEIKEEQVKAGLEKEKGIFKALEAYALANP 534
            MGV     E  S +   KLFK      D ++PKV+ Q+ ++VE++ G+GGPG++KK     G    Y  H++DA+D+ +  YNY+ + G G     +++ +++E+K++  PDGGS   + +KF+ K    ++   E+ KA   +  G+FKA+E Y LANP
Sbjct:    1 MGVFAFEDEHPSAVAQAKLFKALTKDSDDIIPKVIEQI-QSVEIVEGNGGPGTVKKITASHGGHTSYVLHKIDAIDEASFEYNYSIVGGTGLDE--SLEKITFESKLLSGPDGGSIGKIKVKFHTKGDVLSDAVREEAKA---RGTGLFKAVEGYVLANP 154          
BLAST of CX294026 vs. ExPASy Swiss-Prot
Match: ABR17_PEA (ABA-responsive protein ABR17 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 5.508e-23
Identity = 57/158 (36.08%), Postives = 91/158 (57.59%), Query Frame = 1
Query:   61 MGVLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYETKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANP 534
            MGV   + E  ST+ P KL+K      D ++PKV+ +  + VE+I G+GGPG+IKK + +E     Y  H++DA+D+ N  YNY+ + G G     +++ V++ET ++   DGGS   + +K++ K  A + +        K  G+ KA+E Y LANP
Sbjct:    1 MGVFVFDDEYVSTVAPPKLYKALAKDADEIVPKVIKEA-QGVEIIEGNGGPGTIKKLSILEDGKTNYVLHKLDAVDEANFGYNYSLVGGPGLHE--SLEKVAFETIILAGSDGGSIVKISVKYHTKGDAALSDAVRDETKAKGTGLIKAIEGYVLANP 155          
BLAST of CX294026 vs. ExPASy Swiss-Prot
Match: PR13_PETCR (Pathogenesis-related protein B OS=Petroselinum crispum GN=PCPR1-3 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 7.194e-23
Identity = 61/157 (38.85%), Postives = 88/157 (56.05%), Query Frame = 1
Query:   61 MGVLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYETKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALAN 531
            MGV     E TS++  EKLFK   L  DTLLP+VLP  +K+ E + GDGG G++K  +  + + +K  K +VDA+DK    Y+Y+ I  +GD  +  I+ ++     V   DGG      I F  K  A + EE +K   ++   IFKA+EAY +AN
Sbjct:    1 MGVQKSEVEATSSVSAEKLFKGLCLDIDTLLPRVLPGAIKSSETLEGDGGVGTVKLVHLGDASPFKTMKQKVDAIDKATFTYSYSII--DGDILLGFIESINNHFTAVPNADGGCTVKSTIIFNTKGDAVVPEENIKFANDQNLTIFKAVEAYLIAN 155          
BLAST of CX294026 vs. ExPASy Swiss-Prot
Match: ALL2_APIGR (Major allergen Api g 2 OS=Apium graveolens PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 7.194e-23
Identity = 64/159 (40.25%), Postives = 93/159 (58.49%), Query Frame = 1
Query:   61 MGVLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYETKVVGTPDGGS--KSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALAN 531
            MGV     E  ST+  EK+++ F+L  DT+ PKVLPQ++K+VE++ GDGG G++K  +  E  ++   K +VD +DK    Y YT I   GD  +  ++ V  E  VV T DGG   K+T +  +  K  A + E+++K   EK    FKA+EAY LAN
Sbjct:    1 MGVQKTVVEAPSTVSAEKMYQGFLLDMDTVFPKVLPQLIKSVEILEGDGGVGTVKLVHLGEATEYTTMKQKVDVIDKAGLAYTYTTI--GGDILVDVLESVVNEFVVVPT-DGGCIVKNTTI--YNTKGDAVLPEDKIKEATEKSALAFKAVEAYLLAN 154          
BLAST of CX294026 vs. ExPASy Swiss-Prot
Match: PRS1_SOLTU (Pathogenesis-related protein STH-21 OS=Solanum tuberosum GN=STH-21 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 9.396e-23
Identity = 61/164 (37.20%), Postives = 94/164 (57.32%), Query Frame = 1
Query:   61 MGVLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGE--GDANIPTIDHVSYETKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANPMPYS 546
            MGV +   E T+ + P +LFK  V+  D L+PK++PQV KN+E      G GSIKK  FVEG+  KY KH++  +D +N +  Y+ IEG+  GD     ++ +SY+ K     +GG     + +++ K    +K+E    G ++   +FK +EAY LANP  Y+
Sbjct:    1 MGVTSYTLETTTPVAPTRLFKALVVDSDNLIPKLMPQV-KNIEA----EGDGSIKKMTFVEGSPIKYLKHKIHVVDDKNLVTKYSMIEGDVLGD----KLESISYDLKFEAHGNGGCVCKSIAEYHTKGDYVLKDEDHNEGKKQGMELFKIVEAYLLANPSVYA 155          
BLAST of CX294026 vs. ExPASy Swiss-Prot
Match: PR11_PETCR (Pathogenesis-related protein A OS=Petroselinum crispum GN=PCPR1-1 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 9.396e-23
Identity = 61/157 (38.85%), Postives = 88/157 (56.05%), Query Frame = 1
Query:   61 MGVLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYETKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALAN 531
            MGV     E TS++  EKLFK   L  DTLLP+VLP  +K+ E + GDGG G++K  +  + + +K  K +VDA+DK    Y+Y+ I  +GD  +  I+ ++     V   DGG      I F  K  A + EE +K   ++   IFKA+EAY +AN
Sbjct:    1 MGVQKSEVETTSSVSAEKLFKGLCLDIDTLLPQVLPGAIKSSETLEGDGGVGTVKLVHLGDASPFKTMKQKVDAIDKATFTYSYSII--DGDILLGFIESINNHFTAVPNADGGCTVKSTIIFNTKGDAVVPEENIKFANDQNLTIFKAVEAYLIAN 155          
BLAST of CX294026 vs. ExPASy Swiss-Prot
Match: RAP_TAROF (Root allergen protein OS=Taraxacum officinale PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 7.954e-22
Identity = 56/150 (37.33%), Postives = 85/150 (56.67%), Query Frame = 1
Query:   85 EETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYETKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANP 534
            E TS+L P  +FK FV+ FDT+ PK  P+  K+++ I GDGG G+IK   + +G  +   KH+VDA+D  N   +YT    EGD  +  I+  ++  K + + DGGS     + F  K  A++ +E V    E  K  FKA+E Y +++P
Sbjct:    7 EITSSLSPSNIFKAFVIDFDTIAPKAEPETYKSIKTIEGDGGVGTIKSITYSDGVPFTSSKHKVDAIDSNNFSISYTIF--EGDVLMGIIESGTHHLKFLPSADGGSVYKHSMVFKCKGDAKLTDENVSLMKEGLKKTFKAIETYVISHP 154          
The following BLAST results are available for this feature:
BLAST of CX294026 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
L18A_LUPLU5.885e-2537.34Protein LlR18A OS=Lupinus luteus GN=LLR18A PE=1 SV... [more]
PRS2_SOLTU1.110e-2337.80Pathogenesis-related protein STH-2 OS=Solanum tube... [more]
RNS1_PANGI1.893e-2340.51Ribonuclease 1 OS=Panax ginseng PE=1 SV=1[more]
L18B_LUPLU3.229e-2335.63Protein LlR18B OS=Lupinus luteus GN=LLR18B PE=1 SV... [more]
ABR17_PEA5.508e-2336.08ABA-responsive protein ABR17 OS=Pisum sativum PE=2... [more]
PR13_PETCR7.194e-2338.85Pathogenesis-related protein B OS=Petroselinum cri... [more]
ALL2_APIGR7.194e-2340.25Major allergen Api g 2 OS=Apium graveolens PE=1 SV... [more]
PRS1_SOLTU9.396e-2337.20Pathogenesis-related protein STH-21 OS=Solanum tub... [more]
PR11_PETCR9.396e-2338.85Pathogenesis-related protein A OS=Petroselinum cri... [more]
RAP_TAROF7.954e-2237.33Root allergen protein OS=Taraxacum officinale PE=1... [more]

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Properties
Property NameValue
Genbank descriptionC05005A02SK FlavRip1 Citrus clementina cDNA clone C05005A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294026 ID=CX294026; Name=CX294026; organism=Citrus clementina; type=EST; length=602bp
TCCCAATTTCAGTTGATCGATAGTTTTCATATTCTTTCTTTGTTTAACTC
TTAGACAATCATGGGTGTTCTCACGTTGAATGCAGAGGAAACAAGCACTC
TCCCCCCTGAAAAGTTGTTCAAACTTTTTGTCCTTCATTTCGACACCCTT
CTGCCCAAAGTCCTGCCTCAGGTTGTAAAGAACGTTGAATTGATTTCAGG
GGATGGAGGCCCTGGAAGCATCAAGAAGTTTAACTTTGTTGAAGGTGCTG
ATTGGAAGTACTTTAAGCATAGGGTTGATGCATTGGACAAAGAGAACAAG
ATATACAATTACACGGCAATTGAAGGTGAGGGTGATGCTAACATCCCTAC
TATTGATCATGTTTCTTATGAGACTAAGGTTGTGGGCACCCCTGACGGAG
GAAGCAAGAGCACCGTTGTTATCAAGTTCTATCCCAAACCAGGTGCCGAG
ATTAAGGAAGAGCAGGTTAAGGCAGGCTTGGAAAAGGAGAAGGGAATTTT
TAAGGCTCTGGAAGCCTATGCCTTGGCAAACCCGATGCCGTATAGCTCTA
CATCAACCTTCACCGATTGCGTCGCCTTGTTGCACATTATGATATATGTT
AT
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