CX294030
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM_LISMO (Superoxide dismutase [Mn] OS=Listeria monocytogenes GN=sodA PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.108e-22 Identity = 51/119 (42.86%), Postives = 78/119 (65.55%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 357 +FW L+P GG P +L AI++ FG+ + +K +A AA GSGW WL ++ +LE+ +TANQD ++ T P+LG+DVWEHAYYL+++N +P+Y++ WNV+NW A+ Sbjct: 84 LFWSILSP---NGGGAPTGNLKAAIESEFGTFDEFKEKFNAAAAARFGSGWAWLVVNDG--KLEIVSTANQDSPLSDGKT--PVLGLDVWEHAYYLKFQNRRPEYIETFWNVINWDEAN 195
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM_MYCPA (Superoxide dismutase [Mn] OS=Mycobacterium paratuberculosis GN=sodA PE=1 SV=3) HSP 1 Score: 105.531 bits (262), Expect = 1.889e-22 Identity = 55/115 (47.83%), Postives = 68/115 (59.13%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 345 I+WKNL+P GG+ P L AID FGS + + SA L GSGW LG DT RL +Q V ++PLL +D+WEHA+YLQYKNVK DY+K WNV+NW Sbjct: 78 IWWKNLSP---DGGDKPTGELAAAIDDAFGSFDKFRAQFSAAANGLQGSGWAVLGYDTVGSRLLTFQLYDQQANVPLG--IIPLLQVDMWEHAFYLQYKNVKADYVKAFWNVVNW 187
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM_BACSU (Superoxide dismutase [Mn] OS=Bacillus subtilis GN=sodA PE=1 SV=5) HSP 1 Score: 105.531 bits (262), Expect = 1.889e-22 Identity = 52/124 (41.94%), Postives = 78/124 (62.90%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 372 +FW L+P GGGEP +L I++ FGS + ++ +A A GSGW WL ++ +LE+ +T NQD +++ T P+LG+DVWEHAYYL Y+N +PDY+ WNV+NW + +Y + Sbjct: 84 LFWTLLSP--NGGGEPT-GALAEEINSVFGSFDKFKEQFAAAAAGRFGSGWAWLVVNNG--KLEITSTPNQDSPLSEGKT--PILGLDVWEHAYYLNYQNRRPDYISAFWNVVNWDEVARLYSE 200
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM_ASPFU (Superoxide dismutase [Mn], mitochondrial OS=Aspergillus fumigatus GN=sodB PE=1 SV=3) HSP 1 Score: 105.531 bits (262), Expect = 1.889e-22 Identity = 53/123 (43.09%), Postives = 71/123 (57.72%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSS-LGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 366 +FWKNLAP GGG+ + L AI+ +GS + + + GSGW WL D +L++ TT +QDP+ AP + G+D+WEHAYYLQY N K Y K IWNV+NW A + Y Sbjct: 79 LFWKNLAPEKSGGGKIDQAPVLKAAIEQRWGSFDKFKDAFNTTLLGIQGSGWGWLVTDGPKGKLDITTTHDQDPVTGAAP----VFGVDMWEHAYYLQYLNDKASYAKGIWNVINWAEAENRY 197
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM_MYCSC (Superoxide dismutase [Mn] (Fragment) OS=Mycobacterium scrofulaceum GN=sodA PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.467e-22 Identity = 55/115 (47.83%), Postives = 68/115 (59.13%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 345 I+WKNL+P GG+ P L AID FGS + + SA L GSGW LG DT RL +Q V ++PLL +D+WEHA+YLQYKNVK DY+K WNV+NW Sbjct: 52 IWWKNLSP---DGGDKPTGELAAAIDDAFGSFDKFRAQFSAAANGLQGSGWAVLGYDTLGSRLLTFQLYDQQANVPLG--IIPLLQVDMWEHAFYLQYKNVKADYVKAFWNVVNW 161
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM_MYCIT (Superoxide dismutase [Mn] (Fragment) OS=Mycobacterium intracellulare GN=sodA PE=3 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 2.467e-22 Identity = 55/115 (47.83%), Postives = 68/115 (59.13%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 345 I+WKNL+P GG+ P L AID FGS + + SA L GSGW LG DT RL +Q V ++PLL +D+WEHA+YLQYKNVK DY+K WNV+NW Sbjct: 52 IWWKNLSP---DGGDKPTGELAAAIDDAFGSFDRFRAQFSAAANGLQGSGWAVLGYDTLGNRLLTFQLYDQQANVPLG--IIPLLQVDMWEHAFYLQYKNVKADYVKAFWNVVNW 161
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM_MYCAV (Superoxide dismutase [Mn] OS=Mycobacterium avium GN=sodA PE=3 SV=3) HSP 1 Score: 105.145 bits (261), Expect = 2.467e-22 Identity = 55/115 (47.83%), Postives = 68/115 (59.13%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNW 345 I+WKNL+P GG+ P L AID FGS + + SA L GSGW LG DT RL +Q V ++PLL +D+WEHA+YLQYKNVK DY+K WNV+NW Sbjct: 78 IWWKNLSP---DGGDKPTGELAAAIDDAFGSFDKFRAQFSAAANGLQGSGWAVLGYDTLGSRLLTFQLYDQQANVPLG--IIPLLQVDMWEHAFYLQYKNVKADYVKAFWNVVNW 187
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM_LISIN (Superoxide dismutase [Mn] OS=Listeria innocua GN=sodA PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.467e-22 Identity = 51/119 (42.86%), Postives = 76/119 (63.87%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYAS 357 +FW L+P GG P L AI++ FG+ + +K +A AA GSGW WL ++ +LE+ +TANQD ++ T P+LG+DVWEHAYYL+++N +P+Y+ WNV+NW A+ Sbjct: 84 LFWSILSP---NGGGAPTGDLKSAIESEFGTFDDFKEKFNAAAAARFGSGWAWLVVNNG--KLEIVSTANQDSPLSDGKT--PVLGLDVWEHAYYLKFQNRRPEYIDTFWNVVNWDEAN 195
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM_LACLM (Superoxide dismutase [Mn] OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=sodA PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.467e-22 Identity = 52/123 (42.28%), Postives = 74/123 (60.16%), Query Frame = 1 Query: 4 FWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 372 FW L P +G +G AI FGS E + A GSGW WL +D E +L+V +TANQD +++ L P+LG+DVWEHAYYL+Y NV+PDY++ +N++NW +++Y K Sbjct: 85 FWLWLRPNTDGSENHADGEIGDAIAKEFGSFETFKTEFKAAATGRFGSGWAWLVVD-EAGKLKVVSTANQDNPISEG--LTPVLGLDVWEHAYYLKYHNVRPDYIEAFFNLVNWDKVNELYAK 204
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM_LACLA (Superoxide dismutase [Mn] OS=Lactococcus lactis subsp. lactis GN=sodA PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.467e-22 Identity = 52/123 (42.28%), Postives = 74/123 (60.16%), Query Frame = 1 Query: 4 FWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 372 FW L P +G +G AI FGS E + A GSGW WL +D E +L+V +TANQD +++ L P+LG+DVWEHAYYL+Y NV+PDY++ +N++NW +++Y K Sbjct: 85 FWLWLRPNTDGSENHADGEIGDAIAKEFGSFETFKTEFKAAATGRFGSGWAWLVVD-EAGKLKVVSTANQDNPISEG--LTPVLGLDVWEHAYYLKYHNVRPDYIEAFFNLVNWDKVNELYAK 204 The following BLAST results are available for this feature:
BLAST of CX294030 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 202
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294030 ID=CX294030; Name=CX294030; organism=Citrus clementina; type=EST; length=570bpback to top |