CX294030
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM_STRP8 (Superoxide dismutase [Mn] OS=Streptococcus pyogenes serotype M18 GN=sodA PE=3 SV=3) HSP 1 Score: 101.679 bits (252), Expect = 2.728e-21 Identity = 49/123 (39.84%), Postives = 77/123 (62.60%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 369 +FW+ L+P + + AID FGS +A ++ +A GSGW WL ++ E +LE+ +TANQD +++ P+L +DVWEHAYYL Y+NV+P+Y+K + ++NWK S++YQ Sbjct: 83 LFWELLSPEKQD----VTPDVAQAIDDAFGSFDAFKEQFTAAATGRFGSGWAWLVVNKE-GQLEITSTANQDTPISEGKK--PILALDVWEHAYYLNYRNVRPNYIKAFFEIINWKKVSELYQ 198
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM_STRP1 (Superoxide dismutase [Mn] OS=Streptococcus pyogenes serotype M1 GN=sodA PE=3 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 2.728e-21 Identity = 49/123 (39.84%), Postives = 77/123 (62.60%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 369 +FW+ L+P + + AID FGS +A ++ +A GSGW WL ++ E +LE+ +TANQD +++ P+L +DVWEHAYYL Y+NV+P+Y+K + ++NWK S++YQ Sbjct: 83 LFWELLSPEKQD----VTPDVAQAIDDAFGSFDAFKEQFTAAATGRFGSGWAWLVVNKE-GQLEITSTANQDTPISEGKK--PILALDVWEHAYYLNYRNVRPNYIKAFFEIVNWKKVSELYQ 198
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM_STAS1 (Superoxide dismutase [Mn/Fe] OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=sodA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.728e-21 Identity = 51/122 (41.80%), Postives = 74/122 (60.66%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 366 +FW+ L P E G I +GSL+A ++ + + AA GSGW WL ++ LE+ TT NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW+ ++Y Sbjct: 83 LFWELLTPNSEEKGTVVDK-----IKEQWGSLDAFKEEFADKAAARFGSGWAWLVVNNG--NLEIVTTPNQDNPLTEGKT--PILGLDVWEHAYYLKYQNKRPDYISAFWNVVNWEKVDELY 195
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM_HAEIN (Superoxide dismutase [Mn] OS=Haemophilus influenzae GN=sodA PE=1 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 2.728e-21 Identity = 55/129 (42.64%), Postives = 78/129 (60.47%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQD-PLVTKAPTLV---PLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQKE 375 +FWK+L G +L AI+ FGS++A + A GSGW WL L E K L V +TANQD PL+ K PLLG+DVWEHAYYL+++N +PDY+K WNV+NW + ++ ++++ Sbjct: 85 LFWKSLKK-----GTTLQGALKDAIERDFGSVDAFKAEFEKAAATRFGSGWAWLVLTAEGK-LAVVSTANQDNPLMGKEVAGCEGFPLLGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDFVAERFEQK 207
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM_STRP6 (Superoxide dismutase [Mn] OS=Streptococcus pyogenes serotype M6 GN=sodA PE=3 SV=3) HSP 1 Score: 101.293 bits (251), Expect = 3.563e-21 Identity = 49/123 (39.84%), Postives = 77/123 (62.60%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 369 +FW+ L+P + + AID FGS +A ++ +A GSGW WL ++ E +LE+ +TANQD +++ P+L +DVWEHAYYL Y+NV+P+Y+K + ++NWK S++YQ Sbjct: 83 LFWELLSPEKQD----ITPDVAQAIDDAFGSFDAFKEQFTAAATGRFGSGWAWLVVNKE-GQLEITSTANQDTPISEGKK--PILALDVWEHAYYLNYRNVRPNYIKAFFEIINWKKVSELYQ 198
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM_ASPOR (Superoxide dismutase [Mn], mitochondrial OS=Aspergillus oryzae GN=sodB PE=3 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 3.563e-21 Identity = 52/125 (41.60%), Postives = 73/125 (58.40%), Query Frame = 1 Query: 1 IFWKNLAP--VHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 369 +FWKNLAP E + L AI+ +GS+E + A L GSGW WL + +LE+ +T +QDP+ K VP+ G+D+WEHAYYLQY N K Y++ IW V+NW+ A D ++ Sbjct: 79 LFWKNLAPHASPETNIDQAAPVLKAAIEAQYGSVEKFKEAFGATLLGLQGSGWGWLVANGPGGKLEIVSTKDQDPVTDK----VPVFGVDMWEHAYYLQYFNNKASYVEGIWKVLNWRTAEDRFK 199
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM_STACA (Superoxide dismutase [Mn/Fe] OS=Staphylococcus carnosus GN=sodA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.653e-21 Identity = 50/123 (40.65%), Postives = 73/123 (59.35%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 369 +FW+ L P E G I +GSL+ + + + A GSGW WL +D + K LE+ +T NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW ++Y+ Sbjct: 83 LFWQLLTPNSEEKGTVIDK-----IKEEWGSLDKFKDEFAKKAAGQFGSGWAWLVVDKDGK-LEIVSTPNQDNPITEGKT--PILGLDVWEHAYYLKYQNKRPDYIDAFWNVVNWNKVDELYE 197
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM1_STAAW (Superoxide dismutase [Mn/Fe] 1 OS=Staphylococcus aureus (strain MW2) GN=sodA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.653e-21 Identity = 51/122 (41.80%), Postives = 75/122 (61.48%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 366 +FW+ L+P E G I +GSLE ++ + + AA GSGW WL ++ +LE+ TT NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW+ ++Y Sbjct: 83 LFWELLSPNSEEKGTVVEK-----IKEQWGSLEEFKKEFADKAAARFGSGWAWLVVNNG--QLEIVTTPNQDNPLTEGKT--PILGLDVWEHAYYLKYQNKRPDYIGAFWNVVNWEKVDELY 195
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM1_STAAS (Superoxide dismutase [Mn/Fe] 1 OS=Staphylococcus aureus (strain MSSA476) GN=sodA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.653e-21 Identity = 51/122 (41.80%), Postives = 75/122 (61.48%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 366 +FW+ L+P E G I +GSLE ++ + + AA GSGW WL ++ +LE+ TT NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW+ ++Y Sbjct: 83 LFWELLSPNSEEKGTVVEK-----IKEQWGSLEEFKKEFADKAAARFGSGWAWLVVNNG--QLEIVTTPNQDNPLTEGKT--PILGLDVWEHAYYLKYQNKRPDYIGAFWNVVNWEKVDELY 195
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM1_STAAR (Superoxide dismutase [Mn/Fe] 1 OS=Staphylococcus aureus (strain MRSA252) GN=sodA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.653e-21 Identity = 51/122 (41.80%), Postives = 75/122 (61.48%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 366 +FW+ L+P E G I +GSLE ++ + + AA GSGW WL ++ +LE+ TT NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW+ ++Y Sbjct: 83 LFWELLSPNSEEKGTVVEK-----IKEQWGSLEEFKKEFADKAAARFGSGWAWLVVNNG--QLEIVTTPNQDNPLTEGKT--PILGLDVWEHAYYLKYQNKRPDYIGAFWNVVNWEKVDELY 195 The following BLAST results are available for this feature:
BLAST of CX294030 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 202
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294030 ID=CX294030; Name=CX294030; organism=Citrus clementina; type=EST; length=570bpback to top |