CX294030
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM1_STAAN (Superoxide dismutase [Mn/Fe] 1 OS=Staphylococcus aureus (strain N315) GN=sodA PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.653e-21 Identity = 51/122 (41.80%), Postives = 75/122 (61.48%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 366 +FW+ L+P E G I +GSLE ++ + + AA GSGW WL ++ +LE+ TT NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW+ ++Y Sbjct: 83 LFWELLSPNSEEKGTVVEK-----IKEQWGSLEEFKKEFADKAAARFGSGWAWLVVNNG--QLEIVTTPNQDNPLTEGKT--PILGLDVWEHAYYLKYQNKRPDYIGAFWNVVNWEKVDELY 195
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM1_STAAM (Superoxide dismutase [Mn/Fe] 1 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=sodA PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.653e-21 Identity = 51/122 (41.80%), Postives = 75/122 (61.48%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 366 +FW+ L+P E G I +GSLE ++ + + AA GSGW WL ++ +LE+ TT NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW+ ++Y Sbjct: 83 LFWELLSPNSEEKGTVVEK-----IKEQWGSLEEFKKEFADKAAARFGSGWAWLVVNNG--QLEIVTTPNQDNPLTEGKT--PILGLDVWEHAYYLKYQNKRPDYIGAFWNVVNWEKVDELY 195
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM1_STAAC (Superoxide dismutase [Mn/Fe] 1 OS=Staphylococcus aureus (strain COL) GN=sodA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.653e-21 Identity = 51/122 (41.80%), Postives = 75/122 (61.48%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 366 +FW+ L+P E G I +GSLE ++ + + AA GSGW WL ++ +LE+ TT NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW+ ++Y Sbjct: 83 LFWELLSPNSEEKGTVVEK-----IKEQWGSLEEFKKEFADKAAARFGSGWAWLVVNNG--QLEIVTTPNQDNPLTEGKT--PILGLDVWEHAYYLKYQNKRPDYIGAFWNVVNWEKVDELY 195
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM1_STAAB (Superoxide dismutase [Mn/Fe] 1 OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=sodA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.653e-21 Identity = 51/122 (41.80%), Postives = 75/122 (61.48%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 366 +FW+ L+P E G I +GSLE ++ + + AA GSGW WL ++ +LE+ TT NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW+ ++Y Sbjct: 83 LFWELLSPNSEEKGTVVEK-----IKEQWGSLEEFKKEFADKAAARFGSGWAWLVVNNG--QLEIVTTPNQDNPLTEGKT--PILGLDVWEHAYYLKYQNKRPDYIGAFWNVVNWEKVDELY 195
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM1_STAA8 (Superoxide dismutase [Mn] 1 OS=Staphylococcus aureus (strain NCTC 8325) GN=sodA PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.653e-21 Identity = 51/122 (41.80%), Postives = 75/122 (61.48%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 366 +FW+ L+P E G I +GSLE ++ + + AA GSGW WL ++ +LE+ TT NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW+ ++Y Sbjct: 83 LFWELLSPNSEEKGTVVEK-----IKEQWGSLEEFKKEFADKAAARFGSGWAWLVVNNG--QLEIVTTPNQDNPLTEGKT--PILGLDVWEHAYYLKYQNKRPDYIGAFWNVVNWEKVDELY 195
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM1_STAA3 (Superoxide dismutase [Mn/Fe] 1 OS=Staphylococcus aureus (strain USA300) GN=sodA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.653e-21 Identity = 51/122 (41.80%), Postives = 75/122 (61.48%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 366 +FW+ L+P E G I +GSLE ++ + + AA GSGW WL ++ +LE+ TT NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW+ ++Y Sbjct: 83 LFWELLSPNSEEKGTVVEK-----IKEQWGSLEEFKKEFADKAAARFGSGWAWLVVNNG--QLEIVTTPNQDNPLTEGKT--PILGLDVWEHAYYLKYQNKRPDYIGAFWNVVNWEKVDELY 195
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM_NEUCR (Superoxide dismutase [Mn], mitochondrial OS=Neurospora crassa GN=sod-2 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.078e-21 Identity = 55/127 (43.31%), Postives = 74/127 (58.27%), Query Frame = 1 Query: 1 IFWKNLAPVH--EGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDT--EFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 369 +FWKNLAP E SL I+ +GS + + SA + GSGW WL ++ E RL + TT +QDP+V VP+ G+D+WEHAYYLQY N K Y++NIW V+NWK A + +Q Sbjct: 108 LFWKNLAPAETPETNYSKAAPSLAAEIEKTWGSFDEFKKAFSAALLGIQGSGWGWLVKESTAEKGRLRIITTKDQDPVVGGE---VPVFGVDMWEHAYYLQYLNGKAAYVENIWKVINWKTAEERFQ 231
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM_STRPY (Superoxide dismutase [Mn] OS=Streptococcus pyogenes GN=sodA PE=1 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 7.938e-21 Identity = 49/123 (39.84%), Postives = 76/123 (61.79%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQ 369 +FW+ L+P + + AID FGS +A ++ +A GSGW WL ++ E +LE+ +TANQD +++ P+L +DVWEHAYYL Y+NV+P+Y+K + ++NWK S +YQ Sbjct: 83 LFWELLSPEKQD----VTPDVAQAIDDAFGSFDAFKEQFTAAATGRFGSGWAWLVVNKE-GQLEITSTANQDTPISEGKK--PILALDVWEHAYYLNYRNVRPNYIKAFFEIINWKKVSALYQ 198
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM_ACIAD (Superoxide dismutase [Mn] OS=Acinetobacter sp. (strain ADP1) GN=sodA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 7.938e-21 Identity = 54/125 (43.20%), Postives = 77/125 (61.60%), Query Frame = 1 Query: 4 FWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQD-PLVTKAPTL-VPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVYQK 372 FW++LA ++ G P +L I FGSL+A QK + + GSGW WL + T +L V +T NQD PL+ + T PLLG+DVWEHAYYL+Y+N + DY+K W+V+NW ++ Y + Sbjct: 103 FWESLAATNKTG--QPSPALVKQITQDFGSLDAFKQKFNEAASGRFGSGWAWL-IVTPNGKLAVTSTPNQDNPLMDLSETKGTPLLGLDVWEHAYYLKYQNRRADYIKAFWSVVNWNKVNERYNE 224
BLAST of CX294030 vs. ExPASy Swiss-Prot
Match: SODM_STAHJ (Superoxide dismutase [Mn/Fe] OS=Staphylococcus haemolyticus (strain JCSC1435) GN=sodA PE=3 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.037e-20 Identity = 50/122 (40.98%), Postives = 74/122 (60.66%), Query Frame = 1 Query: 1 IFWKNLAPVHEGGGEPPHSSLGWAIDTHFGSLEALIQKMSAEGAALHGSGWVWLGLDTEFKRLEVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNIWNVMNWKYASDVY 366 +FW+ L P E G I +GSL+ ++ + + AA GSGW WL ++ +LE+ TT NQD +T+ T P+LG+DVWEHAYYL+Y+N +PDY+ WNV+NW+ ++Y Sbjct: 83 LFWELLTPNSEEKGTVVDK-----IKEQWGSLDEFKKEFADKAAARFGSGWAWLVVNNG--QLEIVTTPNQDNPLTEGKT--PILGLDVWEHAYYLKYQNKRPDYISAFWNVVNWEKVDELY 195 The following BLAST results are available for this feature:
BLAST of CX294030 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 202
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294030 ID=CX294030; Name=CX294030; organism=Citrus clementina; type=EST; length=570bpback to top |