CX294041

Overview
NameCX294041
Unique NameCX294041
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length513
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294041 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.219e-14
Identity = 38/87 (43.68%), Postives = 51/87 (58.62%), Query Frame = 3
Query:   15 GTRVFMKWILHDWDDQACVKILKNCRKAIPEKTGKLVLVEIVVK-EDDNDVFGDTAYLFDLCMFAHTRGGKERTEKEWKQILEDGGF 272
            G  +FMKWI HDW D+ C+K LKNC  A+PE  GK+++ E ++    D  +        D  M AH  GGKERTEKE++ +    GF
Sbjct:  264 GDAIFMKWICHDWSDEHCLKFLKNCYAALPEH-GKVIVAECILPLSPDPSLATKGVIHIDAIMLAHNPGGKERTEKEFEALAIGAGF 349          
BLAST of CX294041 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 5.510e-14
Identity = 37/84 (44.05%), Postives = 51/84 (60.71%), Query Frame = 3
Query:   24 VFMKWILHDWDDQACVKILKNCRKAIPEKTGKLVLVEIVVK-EDDNDVFGDTAYLFDLCMFAHTRGGKERTEKEWKQILEDGGF 272
            VFMKWI HDW D+ C+  LKNC  A+PE  GK++LVE ++    D  +        D+ M AH  GGKERT++E++ +    GF
Sbjct:  261 VFMKWICHDWSDEHCLTFLKNCYDALPE-NGKVILVECILPVAPDTSLATKGVMHVDVIMLAHNPGGKERTDREFESLARGAGF 343          
BLAST of CX294041 vs. ExPASy Swiss-Prot
Match: COOMT_COPJA (Columbamine O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 9.398e-14
Identity = 38/101 (37.62%), Postives = 61/101 (60.40%), Query Frame = 3
Query:   24 VFMKWILHDWDDQACVKILKNCRKAIPEKTGKLVLVEIVVKEDDNDVFGDTAYLFDLCMFAHTRGGKERTEKEWKQILEDGGFLRHNIINLPAVPAIIEAY 326
            + +K  LH+++D  C+KIL   ++A+P   GK++LVEIVV  ++  +F  T+    + M      GKERT+KEW+ +L    F  H +I + A+ +II AY
Sbjct:  252 ILLKSTLHNYEDDDCIKILNIAKEALPSTGGKVILVEIVVDTENLPLF--TSARLSMGMDMMLMSGKERTKKEWEDLLRKANFTSHQVIPIMAIESIIVAY 350          
BLAST of CX294041 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGU (Caffeic acid 3-O-methyltransferase OS=Eucalyptus gunnii GN=OMT PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.227e-13
Identity = 37/87 (42.53%), Postives = 49/87 (56.32%), Query Frame = 3
Query:   15 GTRVFMKWILHDWDDQACVKILKNCRKAIPEKTGKLVLVEIVVK-EDDNDVFGDTAYLFDLCMFAHTRGGKERTEKEWKQILEDGGF 272
            G  +FMKWI HDW D  C K LKNC  A+P   GK+++ E V+    D  +        D  M AH  GGKERT+KE++ + +  GF
Sbjct:  260 GDAIFMKWICHDWSDDHCAKFLKNCYDALP-NIGKVIVAECVLPVYPDTSLATKNVIHIDCIMLAHNPGGKERTQKEFETLAKGAGF 345          
BLAST of CX294041 vs. ExPASy Swiss-Prot
Match: COMT1_MAIZE (Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.603e-13
Identity = 36/87 (41.38%), Postives = 52/87 (59.77%), Query Frame = 3
Query:   15 GTRVFMKWILHDWDDQACVKILKNCRKAIPEKTGKLVLVEIVVK-EDDNDVFGDTAYLFDLCMFAHTRGGKERTEKEWKQILEDGGF 272
            G  + MKWILHDW D  C  +LKNC  A+PE  GK+++VE V+    +        +  D+ M AH  GGKER E+E++++ +  GF
Sbjct:  260 GDAILMKWILHDWSDAHCATLLKNCYDALPE-NGKVIVVECVLPVNTEATPKAQGVFHVDMIMLAHNPGGKERYEREFRELAKGAGF 345          
BLAST of CX294041 vs. ExPASy Swiss-Prot
Match: 7OMT9_MEDSA (Isoflavone-7-O-methyltransferase 9 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.734e-13
Identity = 40/106 (37.74%), Postives = 65/106 (61.32%), Query Frame = 3
Query:   24 VFMKWILHDWDDQACVKILKNCRKAIPE--KTGKLVLVEIVV--KEDDNDVFGDTAYLFDLCMFAHTRGGKERTEKEWKQILEDGGFLRHNIINLPAVPAIIEAYP 329
            V +K+ILH+W D+ C++ILK C++A+    K GK+ ++++V+  K+D+N V      L D+ M      GKER E+EWK++  + GF  + I  L    ++IE YP
Sbjct:  250 VLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVINEKKDENQV-TQIKLLMDVNMAC--LNGKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIYP 352          
BLAST of CX294041 vs. ExPASy Swiss-Prot
Match: 7OMT8_MEDSA (Isoflavone-7-O-methyltransferase 8 OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.734e-13
Identity = 40/106 (37.74%), Postives = 65/106 (61.32%), Query Frame = 3
Query:   24 VFMKWILHDWDDQACVKILKNCRKAIPE--KTGKLVLVEIVV--KEDDNDVFGDTAYLFDLCMFAHTRGGKERTEKEWKQILEDGGFLRHNIINLPAVPAIIEAYP 329
            V +K+ILH+W D+ C++ILK C++A+    K GK+ ++++V+  K+D+N V      L D+ M      GKER E+EWK++  + GF  + I  L    ++IE YP
Sbjct:  250 VLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQV-TQIKLLMDVNMAC--LNGKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIYP 352          
BLAST of CX294041 vs. ExPASy Swiss-Prot
Match: 7OMT6_MEDSA (Isoflavone-7-O-methyltransferase 6 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.734e-13
Identity = 40/106 (37.74%), Postives = 65/106 (61.32%), Query Frame = 3
Query:   24 VFMKWILHDWDDQACVKILKNCRKAIPE--KTGKLVLVEIVV--KEDDNDVFGDTAYLFDLCMFAHTRGGKERTEKEWKQILEDGGFLRHNIINLPAVPAIIEAYP 329
            V +K+ILH+W D+ C++ILK C++A+    K GK+ ++++V+  K+D+N V      L D+ M      GKER E+EWK++  + GF  + I  L    ++IE YP
Sbjct:  250 VLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDEKKDENQV-TQIKLLMDVNMAC--LNGKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIYP 352          
BLAST of CX294041 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.571e-13
Identity = 36/87 (41.38%), Postives = 51/87 (58.62%), Query Frame = 3
Query:   15 GTRVFMKWILHDWDDQACVKILKNCRKAIPEKTGKLVLVEIVVKEDDNDV-FGDTAYLFDLCMFAHTRGGKERTEKEWKQILEDGGF 272
            G  + MKWILHDW D  C  +LKNC  A+PE  GK+++VE V+  +   V      +  D+ M AH  GG+ER E+E+  + +  GF
Sbjct:  258 GDAILMKWILHDWSDAHCATLLKNCYDALPE-NGKVIIVECVLPVNTEAVPKAQGVFHVDMIMLAHNPGGRERYEREFHDLAKGAGF 343          
BLAST of CX294041 vs. ExPASy Swiss-Prot
Match: IEMT_CLABR ((Iso)eugenol O-methyltransferase OS=Clarkia breweri GN=IEMT1 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 4.664e-13
Identity = 36/87 (41.38%), Postives = 52/87 (59.77%), Query Frame = 3
Query:   15 GTRVFMKWILHDWDDQACVKILKNCRKAIPEKTGKLVLVE-IVVKEDDNDVFGDTAYLFDLCMFAHTRGGKERTEKEWKQILEDGGF 272
            G  +F+KWI HDW D+ C+K+LKNC  A+P+  GK+++ E I+    D  +        D  M A+  GGKERTEKE++ +    GF
Sbjct:  262 GDAIFIKWICHDWSDEHCLKLLKNCYAALPDH-GKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGF 347          
The following BLAST results are available for this feature:
BLAST of CX294041 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
COMT1_CLABR4.219e-1443.68Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
COMT2_POPTM5.510e-1444.05Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]
COOMT_COPJA9.398e-1437.62Columbamine O-methyltransferase OS=Coptis japonica... [more]
COMT1_EUCGU1.227e-1342.53Caffeic acid 3-O-methyltransferase OS=Eucalyptus g... [more]
COMT1_MAIZE1.603e-1341.38Caffeic acid 3-O-methyltransferase OS=Zea mays PE=... [more]
7OMT9_MEDSA2.734e-1337.74Isoflavone-7-O-methyltransferase 9 OS=Medicago sat... [more]
7OMT8_MEDSA2.734e-1337.74Isoflavone-7-O-methyltransferase 8 OS=Medicago sat... [more]
7OMT6_MEDSA2.734e-1337.74Isoflavone-7-O-methyltransferase 6 OS=Medicago sat... [more]
COMT1_SACOF3.571e-1341.38Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]
IEMT_CLABR4.664e-1341.38(Iso)eugenol O-methyltransferase OS=Clarkia brewer... [more]

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Properties
Property NameValue
Genbank descriptionC05005C01SK FlavRip1 Citrus clementina cDNA clone C05005C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294041 ID=CX294041; Name=CX294041; organism=Citrus clementina; type=EST; length=513bp
CTCGTGCCGAATTCGGCACGAGGGTTTTTATGAAGTGGATATTGCATGAT
TGGGATGACCAAGCCTGTGTCAAGATTCTGAAAAACTGCCGAAAAGCAAT
TCCGGAGAAAACTGGAAAGCTTGTGTTAGTGGAAATCGTTGTAAAAGAAG
ATGATAACGACGTATTTGGCGACACGGCCTACTTATTTGATCTATGTATG
TTTGCTCACACAAGGGGTGGGAAGGAAAGGACTGAAAAAGAATGGAAGCA
AATATTGGAAGATGGAGGATTCCTCCGCCATAACATCATCAACCTACCGG
CTGTACCTGCCATTATTGAGGCCTATCCGCAGTGACATTAATTTGAAGCT
CAAATAAAATTACAAGTTTCACTCCCACCGAATACCAACTCTTCCCCTCC
CCCCCCCAAAAAAAAGCATAAAGTGCGTTTACGGCTAGCTTAATTAATTT
CTATTTGCTCTTGATTAAAAATAAAGTTCTGAAGTTTCACTCTGAACCGA
TCGCAGCATCATC
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