CX294041

Overview
NameCX294041
Unique NameCX294041
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length513
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294041 vs. ExPASy Swiss-Prot
Match: CVMT1_OCIBA (Chavicol O-methyltransferase OS=Ocimum basilicum GN=CVOMT1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.772e-12
Identity = 37/104 (35.58%), Postives = 65/104 (62.50%), Query Frame = 3
Query:   24 VFMKWILHDWDDQACVKILKNCRKAIPEKTGKLVLVEIV--VKEDDNDVFGDTAYLFDLCMFAHTRGGKERTEKEWKQILEDGGFLRHNIINLPAVPAIIEAYP 329
            + +K+I+HDWDD+  +KILK C+ A+    GK++++++V  V  D ++V  D  + FD+ M ++    KERT  EW++++   GF  + +     V ++IEAYP
Sbjct:  256 ILLKFIIHDWDDEEGLKILKRCKDAV-GIGGKVIIIDVVVGVNHDVDEVLEDQLH-FDMAMMSYF-NAKERTMNEWEKLISAAGFTSYKLTPAFGVRSLIEAYP 356          
BLAST of CX294041 vs. ExPASy Swiss-Prot
Match: SMT_COPJA ((S)-scoulerine 9-O-methyltransferase OS=Coptis japonica GN=SMT PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.023e-12
Identity = 38/88 (43.18%), Postives = 53/88 (60.23%), Query Frame = 3
Query:   24 VFMKWILHDWDDQACVKILKNCRKAIPEKTGKLVLVEIVVKEDDNDVFGDTAYLF-----DLCMFAHTRGGKERTEKEWKQILEDGGF 272
            + +KW+LHDWDD   +KILKNC KA+PE  G ++++E V+ +    V G+ A  F     DL M A   GGKERT  E+  + +  GF
Sbjct:  277 ILLKWVLHDWDDDRSIKILKNCWKALPE-NGTVIVIEFVLPQ----VLGNNAESFNALTPDLLMMALNPGGKERTTIEFDGLAKAAGF 359          
BLAST of CX294041 vs. ExPASy Swiss-Prot
Match: EOMT1_OCIBA (Eugenol O-methyltransferase OS=Ocimum basilicum GN=EOMT1 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.023e-12
Identity = 38/104 (36.54%), Postives = 63/104 (60.58%), Query Frame = 3
Query:   24 VFMKWILHDWDDQACVKILKNCRKAIPEKTGKLVLVEIV--VKEDDNDVFGDTAYLFDLCMFAHTRGGKERTEKEWKQILEDGGFLRHNIINLPAVPAIIEAYP 329
            + +K I+HDWDD   +KILK C+ A+    GK++++++V  V  D ++V  D  + FD+ M  +    KERT  EW++++ D GF  + +     V ++IEAYP
Sbjct:  257 ILLKSIIHDWDDVEGLKILKKCKDAV-VMGGKVIIIDVVVGVNHDIDEVLEDQLH-FDMAMMCYF-NAKERTMSEWEKLIYDAGFKSYKLTPAFGVRSLIEAYP 357          
BLAST of CX294041 vs. ExPASy Swiss-Prot
Match: IMT1_MESCR (Inositol 4-methyltransferase OS=Mesembryanthemum crystallinum GN=IMT1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.149e-11
Identity = 37/103 (35.92%), Postives = 60/103 (58.25%), Query Frame = 3
Query:   24 VFMKWILHDWDDQACVKILKNCRKAIPEKTGKLVLVE--IVVKEDDNDVFGDTAYLFDLCMFAHTRGGKERTEKEWKQILEDGGFLRHNIINLPAVPAIIEAY 326
            +FMKW+LHDW D+ CVKIL  C +++  K GK++LVE  I V  +DN +     +  D     H +GGKER++++++ +    GF   ++I       ++E Y
Sbjct:  263 IFMKWVLHDWSDEHCVKILNKCYESL-AKGGKIILVESLIPVIPEDN-LESHMVFSLDCHTLVHNQGGKERSKEDFEALASKTGFSTVDVICCAYDTWVMELY 363          
The following BLAST results are available for this feature:
BLAST of CX294041 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
CVMT1_OCIBA1.772e-1235.58Chavicol O-methyltransferase OS=Ocimum basilicum G... [more]
SMT_COPJA3.023e-1243.18(S)-scoulerine 9-O-methyltransferase OS=Coptis jap... [more]
EOMT1_OCIBA3.023e-1236.54Eugenol O-methyltransferase OS=Ocimum basilicum GN... [more]
IMT1_MESCR1.149e-1135.92Inositol 4-methyltransferase OS=Mesembryanthemum c... [more]

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Properties
Property NameValue
Genbank descriptionC05005C01SK FlavRip1 Citrus clementina cDNA clone C05005C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294041 ID=CX294041; Name=CX294041; organism=Citrus clementina; type=EST; length=513bp
CTCGTGCCGAATTCGGCACGAGGGTTTTTATGAAGTGGATATTGCATGAT
TGGGATGACCAAGCCTGTGTCAAGATTCTGAAAAACTGCCGAAAAGCAAT
TCCGGAGAAAACTGGAAAGCTTGTGTTAGTGGAAATCGTTGTAAAAGAAG
ATGATAACGACGTATTTGGCGACACGGCCTACTTATTTGATCTATGTATG
TTTGCTCACACAAGGGGTGGGAAGGAAAGGACTGAAAAAGAATGGAAGCA
AATATTGGAAGATGGAGGATTCCTCCGCCATAACATCATCAACCTACCGG
CTGTACCTGCCATTATTGAGGCCTATCCGCAGTGACATTAATTTGAAGCT
CAAATAAAATTACAAGTTTCACTCCCACCGAATACCAACTCTTCCCCTCC
CCCCCCCAAAAAAAAGCATAAAGTGCGTTTACGGCTAGCTTAATTAATTT
CTATTTGCTCTTGATTAAAAATAAAGTTCTGAAGTTTCACTCTGAACCGA
TCGCAGCATCATC
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