CX294108
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.565e-34 Identity = 73/139 (52.52%), Postives = 89/139 (64.03%), Query Frame = 3 Query: 138 CGSGVVCGERDTGHGTD---GGELGKIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC--YRYCPCPLPGQYYGRGP 539 CGSG C + G G GG+LG IS MF+ +L HRN+ C + FY+Y+AFI AA++FP FG SG+ RKREIAAFFAQT ETTGGW AP G YAWGYC++R+ P DYC PC +Y+GRGP Sbjct: 57 CGSGN-CQSQCPGGGPGPGPGGDLGSAISNSMFDQMLKHRNENSCQGKNFYSYNAFINAARSFPGFGTSGDINARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLRERGNP-GDYCPPSSQWPCAPGRKYFGRGP 193
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHI4_SOLTU (Endochitinase 4 (Fragment) OS=Solanum tuberosum GN=CHTB4 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.044e-34 Identity = 71/137 (51.82%), Postives = 88/137 (64.23%), Query Frame = 3 Query: 138 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPHRNDVRCPARG-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC--YRYCPCPLPGQYYGRGP 539 C SG G G GG++G +IS MF+ +L HRND C + FY+Y+AFI AA++F FG +G+ T RKREIAAFFAQT ETTGGWP AP G YAWGYC++R+ P DYC PC +Y+GRGP Sbjct: 58 CPSGPSPKPPTPGPGPSGGDIGSVISNSMFDQMLKHRNDNACQGKNNFYSYNAFINAARSFGGFGTTGDTTARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSP-GDYCTPSGQWPCAPGRKYFGRGP 193
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.670e-34 Identity = 73/137 (53.28%), Postives = 89/137 (64.96%), Query Frame = 3 Query: 138 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPHRNDVRCPARG-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC--YRYCPCPLPGQYYGRGP 539 CG G C + G G+LG +IS MF+ +L HRND C +G FY+Y+AFI AA +FP FG +G+ T RKREIAAFFAQT ETTGGWP AP G YAWGYC++R+ P DYC PC +Y+GRGP Sbjct: 49 CGPGN-CQSQCPGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSP-GDYCTPSSQWPCAPGRKYFGRGP 183
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 4.554e-34 Identity = 69/122 (56.56%), Postives = 83/122 (68.03%), Query Frame = 3 Query: 180 GTDGGELGKIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCP-LPGQ-YYGRGP 539 G G++ IIS MF+ +L HRND C + FYTY+AFI AA++F FG +G+ T RKRE+AAFFAQT ETTGGW AP G YAWGYCY+R+ P S YC + P PGQ YYGRGP Sbjct: 79 GPSTGDISNIISSSMFDQMLKHRNDNTCQGKSFYTYNAFITAARSFRGFGTTGDTTRRKREVAAFFAQTSHETTGGWDTAPDGRYAWGYCYLREQGNPPS-YCVQSSQWPCAPGQKYYGRGP 199
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2) HSP 1 Score: 143.28 bits (360), Expect = 7.767e-34 Identity = 71/140 (50.71%), Postives = 89/140 (63.57%), Query Frame = 3 Query: 126 SAQNCGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYC--PCPLPGQYYGRGP 539 +++ CG G C + +G + GG L +IS + F ++L HRND C + FYTYDAF+ AAKAFP F N G+ +KREIAAF QT ETTGGWP AP G YAWGYC++R+ + S YC PC QYYGRGP Sbjct: 47 TSEYCGDG--CQSQCSG-SSGGGTLSSLISGDTFNNMLKHRNDNACQGKPFYTYDAFLSAAKAFPNFANKGDTATKKREIAAFLGQTSHETTGGWPTAPDGPYAWGYCFLRE--QNPSTYCQASSEFPCASGKQYYGRGP 181
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 7.767e-34 Identity = 73/132 (55.30%), Postives = 89/132 (67.42%), Query Frame = 3 Query: 156 CGERDTGHGTDGGELGKIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTG--GWPDAPGGEYAWGYCYIRQVSRPASDYCY--RYCPCPLPGQYYGRGP 539 C + +G G D G L +I+RE F+ +L HRND CPARGFYTYDAFI AAK+FPAF +G++ RKRE+AAF AQT ETTG GW AP G Y WGYCY R+++ +DYC PC QY+GRGP Sbjct: 58 CQSQCSGSGGDTGGLDSLITRERFDQMLLHRNDGGCPARGFYTYDAFIAAAKSFPAFATTGDDATRKREVAAFLAQTSHETTGGAGWA-APDGPYTWGYCYNRELN--PADYCQWDPNYPCAPGKQYFGRGP 186
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.325e-33 Identity = 69/135 (51.11%), Postives = 85/135 (62.96%), Query Frame = 3 Query: 141 GSGVVCGERDTGHGTDGGELGKIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYC--PCPLPGQYYGRGP 539 G G G G G GG + ++S+E+FE LL HRND CPARGFYTYDA + AA AFP F +G++ RKRE+AAF QT ETTGGW AP G Y+WGYC+ ++ AS YC PC +Y+GRGP Sbjct: 67 GGGGGGGGGGGGGGGGGGAVEAVVSKELFEQLLLHRNDAACPARGFYTYDALVTAAAAFPDFAATGDDEARKREVAAFLGQTSHETTGGWATAPDGPYSWGYCFKEEIGATAS-YCVPSAEWPCAPDKKYFGRGP 200
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 3.855e-33 Identity = 67/142 (47.18%), Postives = 84/142 (59.15%), Query Frame = 3 Query: 123 GSAQNCGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVS-RPASDYCYR--YCPCPLPGQYYGRGP 539 G C G G G + I+SR +F+ +L HRND CPA+ FYTYDAF+ AA AFP+F +G+ RKRE+AAF AQT ETTGGW AP G Y+WGYC+ + + SDYC + PC +YYGRGP Sbjct: 54 GCQSQCSGSCGGGGPTPPSGGGGSGVASIVSRSLFDQMLLHRNDAACPAKNFYTYDAFVAAANAFPSFATTGDAATRKREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYCVQSSQWPCAAGKKYYGRGP 195
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 5.035e-33 Identity = 71/137 (51.82%), Postives = 87/137 (63.50%), Query Frame = 3 Query: 138 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPHRNDVRCPARG-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC--YRYCPCPLPGQYYGRGP 539 CG G C + G G+LG +IS MF+ +L HRND C + FY+Y+AFI AA +FP FG +G+ T RKREIAAF AQT ETTGGWP AP G YAWGYC++R+ P DYC PC +Y+GRGP Sbjct: 49 CGPGN-CQSQCPGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPSAPDGPYAWGYCFLREQGSP-GDYCTPSSQWPCAPGRKYFGRGP 183
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 6.575e-33 Identity = 68/123 (55.28%), Postives = 83/123 (67.48%), Query Frame = 3 Query: 180 GTDGGELGKIISREMFEDLLPHRNDVRCPARG-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC--YRYCPCPLPGQYYGRGP 539 G G+LG +IS MF+ +L HRND C +G FY+Y+AFI AA +FP FG +G+ T RKREIAAFFAQT ETTGGW AP G YAWGYC++R+ P DYC PC +Y+GRGP Sbjct: 60 GGSPGDLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLREQGSP-GDYCTPSNQWPCAPGRKYFGRGP 181 The following BLAST results are available for this feature:
BLAST of CX294108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294108 ID=CX294108; Name=CX294108; organism=Citrus clementina; type=EST; length=560bpback to top |