CX294108
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.122e-32 Identity = 70/137 (51.09%), Postives = 87/137 (63.50%), Query Frame = 3 Query: 138 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPHRNDVRCPARG-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC--YRYCPCPLPGQYYGRGP 539 CG G C + G G+LG +IS MF+ +L HRND C + FY+Y+AF+ AA +FP FG +G+ T RKREIAAF AQT ETTGGWP AP G YAWGYC++R+ P DYC PC +Y+GRGP Sbjct: 53 CGPGN-CQSQCPGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFVTAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFLREQGSP-GDYCTPSSQWPCAPGRKYFGRGP 187
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 1.122e-32 Identity = 73/127 (57.48%), Postives = 85/127 (66.93%), Query Frame = 3 Query: 171 TGHGTDGGELGKIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTG--GWPDAPGGEYAWGYCYIRQVSRPASDYCYR--YCPCPLPGQYYGRGP 539 +G G L +ISRE F +L HRND CPARGFYTYDAFI AA++FPAF +G++ RKREIAAF AQT ETTG GW AP G YAWGYCY R+++ P S YC PC QY+GRGP Sbjct: 43 SGPAPGPGGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELN-PPSSYCASDPNYPCAPGKQYFGRGP 167
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.122e-32 Identity = 73/127 (57.48%), Postives = 85/127 (66.93%), Query Frame = 3 Query: 171 TGHGTDGGELGKIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTG--GWPDAPGGEYAWGYCYIRQVSRPASDYCYR--YCPCPLPGQYYGRGP 539 +G G L +ISRE F +L HRND CPARGFYTYDAFI AA++FPAF +G++ RKREIAAF AQT ETTG GW AP G YAWGYCY R+++ P S YC PC QY+GRGP Sbjct: 65 SGPAPGPGGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELN-PPSSYCASDPNYPCAPGKQYFGRGP 189
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 2.499e-32 Identity = 66/122 (54.10%), Postives = 81/122 (66.39%), Query Frame = 3 Query: 180 GTDGGELGKIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC--YRYCPCPLPGQYYGRGP 539 GT G + I+SR F+ +L HRND C A+GFYTYDAF+ AA AFP FG +G+ +KRE+AAF AQT ETTGGW AP G +AWGYC+ +Q +SDYC PC +YYGRGP Sbjct: 19 GTARGSVSSIVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAFLAQTSHETTGGWATAPDGAFAWGYCF-KQERGASSDYCTPSAQWPCAPGKRYYGRGP 139
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 7.270e-32 Identity = 66/122 (54.10%), Postives = 80/122 (65.57%), Query Frame = 3 Query: 180 GTDGGELGKIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC--YRYCPCPLPGQYYGRGP 539 GT G + IIS F+ +L HRND C A+GFYTYDAF+ AA AFP FG +G+ RKR++AAF AQT ETTGGW AP G +AWGYC+ +Q A+DYC PC +YYGRGP Sbjct: 19 GTAHGSVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFLAQTSHETTGGWATAPDGAFAWGYCF-KQERGAAADYCTPSAQWPCAPGKRYYGRGP 139
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4) HSP 1 Score: 136.732 bits (343), Expect = 7.270e-32 Identity = 72/151 (47.68%), Postives = 88/151 (58.28%), Query Frame = 3 Query: 123 GSAQNCGSGVVCGERDTGHG----------TDGGELGKIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC--YRYCPCPLPGQYYGRGP 539 GS CG G C + +G G + GG + I+SR +F+ +L HRND C A+GFYTYDAF+ AA AF FG +G RKRE+AAF AQT ETTGGW AP G +AWGYC+ +Q S+YC PC YYGRGP Sbjct: 44 GSTPYCGDG--CQSQCSGCGGGSTPVTPTPSGGGGVSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAASAFRGFGTTGGTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCF-KQERGATSNYCTPSAQWPCAPGKSYYGRGP 191
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 9.495e-32 Identity = 58/119 (48.74%), Postives = 81/119 (68.07%), Query Frame = 3 Query: 183 TDGGELGKIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCPLPGQYYGRGP 539 T GG++G+++ +F+ +L +RND RC GFYTYDAFI AA++F FG +G++ +K+E+AAF AQT ETTGGWP AP G YAWGYC++ + + + PC +YYGRGP Sbjct: 75 TGGGDVGRLVPSSLFDQMLKYRNDGRCAGHGFYTYDAFIAAARSFNGFGTTGDDNTKKKELAAFLAQTSHETTGGWPTAPDGPYAWGYCFVSEQNTQEVYCSPKDWPCAPGKKYYGRGP 193
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 9.495e-32 Identity = 65/119 (54.62%), Postives = 79/119 (66.39%), Query Frame = 3 Query: 189 GGELGKIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC--YRYCPCPLPGQYYGRGP 539 GG + I+SR +F+ +L HRND C A+GFYTYDAF+ AA AFP FG +G+ RKRE+AAF AQT ETTGGW AP G +AWGYC+ +Q S+YC PC YYGRGP Sbjct: 77 GGGVSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAAGAFPGFGTTGSTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCF-KQERGATSNYCTPSAQWPCAPGKSYYGRGP 194
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2) HSP 1 Score: 135.961 bits (341), Expect = 1.240e-31 Identity = 68/142 (47.89%), Postives = 84/142 (59.15%), Query Frame = 3 Query: 123 GSAQNCGSGVVCGERDTGHGTDGGE-LGKIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC--YRYCPCPLPGQYYGRGP 539 G C G CG T + GG + IIS +F+ +L HRND C A+GFYTYDAF+ AA A+P F +G+ KRE+AAF AQT ETTGGWP AP G Y+WGYC+ + + A YC PC +YYGRGP Sbjct: 52 GCQSQCSGG--CGGGPTPPSSGGGSGVASIISPSLFDQMLLHRNDQACAAKGFYTYDAFVAAANAYPDFATTGDADTCKREVAAFLAQTSHETTGGWPTAPDGPYSWGYCFKEENNGNAPTYCEPKPEWPCAAGKKYYGRGP 191
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 2.115e-31 Identity = 69/142 (48.59%), Postives = 83/142 (58.45%), Query Frame = 3 Query: 126 SAQNCGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNET-MRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPAS-DYCYRYC--PCPLPGQYYGRGP 539 SA CG G G+ G + I+SR +F+ +L HRND CPA FYTYDAF+ AA AFP F +G + KRE+AAF AQT ETTGGW AP G YAWGYC+ + A DYC + PC +YYGRGP Sbjct: 61 SAAGCGGG----GPTPPSGSGGSGVASIVSRSLFDQMLLHRNDAACPASNFYTYDAFVAAASAFPGFAAAGGDADTNKREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQSAQWPCAAGKKYYGRGP 198 The following BLAST results are available for this feature:
BLAST of CX294108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294108 ID=CX294108; Name=CX294108; organism=Citrus clementina; type=EST; length=560bpback to top |