CX294108
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 1.791e-30 Identity = 62/116 (53.45%), Postives = 77/116 (66.38%), Query Frame = 3 Query: 198 LGKIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC--YRYCPCPLPGQYYGRGP 539 + +IS+ +FE +L HRND C A+GFYTY+AFI A K F AFG +G+ R +EIAAF AQT ETTGGW AP G Y+WGYCY R+ P DYC + PC +Y+GRGP Sbjct: 5 ISSLISKNLFERILVHRNDRACGAKGFYTYEAFITATKTFAAFGTTGDTNTRNKEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQGSP-GDYCASSQQWPCAPGKKYFGRGP 119
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 4.876e-28 Identity = 59/105 (56.19%), Postives = 70/105 (66.67%), Query Frame = 3 Query: 141 GSGVVCGERDTGHGTDGGELGKIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYI 455 G G G G G G L II MF+D+L +RND +CPA GFYTY+AFI AAK FP FGN+G++ MRKREIAAF QT ET G WP A G +Y WGYC++ Sbjct: 66 GGGGGGGGGGGGGGGGDGYLSDIIPESMFDDMLKYRNDPQCPAVGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETNGWWPAAQGDQYDWGYCHM 170
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.128e-27 Identity = 57/125 (45.60%), Postives = 74/125 (59.20%), Query Frame = 3 Query: 174 GHGTDGGELGKIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC---YRYCPCPLPGQYYGRGP 539 G+ + I+S +++ L H++D CPARGFYTY +F+ AA FP F +G RKRE+AAF AQ ETTGGW AP G YAWG CY +++ P S YC + PC Y+GRGP Sbjct: 41 GYSPSPSPVSSIVSEQLYASLFLHKDDAACPARGFYTYASFVRAATRFPRFAATGCADARKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEIN-PQSSYCDATDKQWPCYPGKSYHGRGP 164
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 7.041e-27 Identity = 58/114 (50.88%), Postives = 71/114 (62.28%), Query Frame = 3 Query: 198 LGKIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCPLPGQYYGRGP 539 +G II+R MFE +L HR D C FYTYDAFI+AA FP FG +GN+ R+RE+AAFF QT ETTGGW AP G +AWGYC + +++ P YYGRGP Sbjct: 27 VGSIITRAMFESMLSHRGDQGCQG-AFYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFFGQTSHETTGGWATAPDGPFAWGYCRVNEIT-------------PSDPPYYGRGP 126
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 7.785e-26 Identity = 57/114 (50.00%), Postives = 80/114 (70.18%), Query Frame = 3 Query: 180 GTDGGELGKIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCPLPGQ 521 G+ ++G I++ ++F ++L +RND RCPA+GFYTYDAFI AA +FP FG +G++T RK+EIAAFF QT ETTGG A G +A GYC++R+ ++ S + Y P L GQ Sbjct: 13 GSFAQDVGTIVTSDLFNEMLKNRNDDRCPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGSLSA-DGPFAGGYCFVREGNQMGSGF-YGRGPIQLTGQ 124
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.328e-25 Identity = 59/120 (49.17%), Postives = 76/120 (63.33%), Query Frame = 3 Query: 180 GTDGGELGKIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCPLPGQYYGRGP 539 GT G I++RE+FE +L RN+ CPA+GFYTYDAFI AA +FP FG +G++T RK+EIAAFF QT ET GG G + GYC++RQ+ + SD +YYGRGP Sbjct: 21 GTLAQNAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETKGG----SAGTFTGGYCFVRQIDQ--SD------------RYYGRGP 122
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.265e-25 Identity = 58/120 (48.33%), Postives = 76/120 (63.33%), Query Frame = 3 Query: 180 GTDGGELGKIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCPLPGQYYGRGP 539 GT G I++RE+FE +L RN+ CPA+GFYTYDAFI AA +FP FG +G++T RK+EIAAFF QT ET GG G + GYC+++Q+ + SD +YYGRGP Sbjct: 21 GTLAQNAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFFGQTSHETNGG----SAGTFTGGYCFVKQIEQ--SD------------RYYGRGP 122
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.124e-24 Identity = 57/114 (50.00%), Postives = 77/114 (67.54%), Query Frame = 3 Query: 180 GTDGGELGKIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCPLPGQ 521 GT +G I++ ++F+ +L +RND RC A FYTYDAFI AA +FP FG +G++T RK+EIAAFF QT ETTGG +P G YA GYC++R+ ++ + Y Y P L GQ Sbjct: 20 GTLAQNVGSIVTSDLFDQMLKNRNDARCFAVRFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGG-TLSPDGPYAGGYCFLREGNQMGNGY-YGRGPIQLTGQ 131
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.124e-24 Identity = 57/114 (50.00%), Postives = 74/114 (64.91%), Query Frame = 3 Query: 198 LGKIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCPLPGQYYGRGP 539 +G I++ ++F ++L +RND RCPA GFYTYDAFI AA +FP FG SG++T R++EIAAFF QT ETTGG A + GYC++RQ SD +YYGRGP Sbjct: 27 IGSIVTNDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQ--NDQSD------------RYYGRGP 124
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.271e-24 Identity = 56/114 (49.12%), Postives = 74/114 (64.91%), Query Frame = 3 Query: 198 LGKIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCPLPGQYYGRGP 539 +G I++ ++F ++L +RND RCPA GFYTYDAFI AA +FP FG +G++T R++EIAAFF QT ETTGG A + GYC++RQ SD +YYGRGP Sbjct: 27 IGSIVTSDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQ--NDQSD------------RYYGRGP 124 The following BLAST results are available for this feature:
BLAST of CX294108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294108 ID=CX294108; Name=CX294108; organism=Citrus clementina; type=EST; length=560bpback to top |