CX294108
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.271e-24 Identity = 57/121 (47.11%), Postives = 73/121 (60.33%), Query Frame = 3 Query: 189 GGELG--KIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYC--PCPLPGQYYGRGP 539 GG G +++ + FE +LPHR+D CPARGFY Y AF+ AA AFPAF +G+ RKRE+AAF AQT T+ GG Y+WGYCY ++V SD+C PC Y+ RGP Sbjct: 92 GGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCY-KEVKGATSDFCVPNARWPCAPGKAYHARGP 204
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.271e-24 Identity = 57/121 (47.11%), Postives = 73/121 (60.33%), Query Frame = 3 Query: 189 GGELG--KIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYC--PCPLPGQYYGRGP 539 GG G +++ + FE +LPHR+D CPARGFY Y AF+ AA AFPAF +G+ RKRE+AAF AQT T+ GG Y+WGYCY ++V SD+C PC Y+ RGP Sbjct: 92 GGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCY-KEVKGATSDFCVPNARWPCAPGKAYHARGP 204
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.120e-23 Identity = 51/111 (45.95%), Postives = 69/111 (62.16%), Query Frame = 3 Query: 213 SREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC--YRYCPCPLPGQYYGRGP 539 + MFE +LP+RN+ CP +GFYTYDA+ A + +P FG +G++ RKRE+AAFFAQT ET+G + WGYC + +++ P SDYC P YYGRGP Sbjct: 68 TESMFEQMLPNRNNDSCPGKGFYTYDAYFVATEFYPGFGMTGDDDTRKRELAAFFAQTSQETSGRSIIGEDAPFTWGYCLVNELN-PNSDYCDPKTKSSYPCVADYYGRGP 177
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.120e-23 Identity = 58/144 (40.28%), Postives = 83/144 (57.64%), Query Frame = 3 Query: 138 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNET-MRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCPLPGQ--YYGRGPFTHLDCI 560 C + + +G G +G +I++ +F +LP+R++ +CPARGFYTYDAFI AA +FPAFG SG + +RE+AAFF QT ETTGG ++ WGYC+ ++++ S Y P L GQ Y G LD + Sbjct: 14 CAAASLLAVAASGAAAQG--VGSVITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQTSHETTGG-TRGSSDQFQWGYCFKEEINKATSPPYYGRGPIQLTGQSNYQAAGNALGLDLV 154
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.138e-19 Identity = 46/82 (56.10%), Postives = 55/82 (67.07%), Query Frame = 3 Query: 198 LGKIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWG 443 + +IS +FE +L HR GFYTYDAFI AAK+FPAF +G+ +RKRE+AAF AQT ETTGGWP AP G Y G Sbjct: 1 VSSVISSSLFEKMLLHR--------GFYTYDAFIAAAKSFPAFATTGSTDVRKREVAAFLAQTSHETTGGWPTAPDGPYELG 74
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 88.5817 bits (218), Expect = 2.270e-17 Identity = 45/124 (36.29%), Postives = 69/124 (55.65%), Query Frame = 3 Query: 171 TGHGTDGGELGKIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRY-CPCPLPGQYYGRGP 539 +G+ T +++ +F+ + HR D CP++GFY+Y +F+ AA++FPAFG G+ RKRE+AAF A T+G D +AWG C+I + +D+C PC +Y RGP Sbjct: 121 SGNSTANSIGNVVVTEPLFDQMFSHRKD--CPSQGFYSYHSFLVAAESFPAFGTIGDVATRKREVAAFLAHISQATSGERSDVE-NPHAWGLCHINTTTVTENDFCTSSDWPCAAGKKYSPRGP 241
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.922e-16 Identity = 51/137 (37.23%), Postives = 69/137 (50.36%), Query Frame = 3 Query: 138 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC---YRYCPCPLPGQYYGRGP 539 CG+G G D T+ + I++ E F L+ +D C A+GFYT DAF+ AA +P+FG +G+ KREIAAFFA ET +CYI ++ P+ +YC PC YYGRGP Sbjct: 49 CGTGCQAGPCDVP-ATNDVSVASIVTPEFFAALVAQADD-GCAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAHANHETI-------------KFCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGP 170
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.199e-12 Identity = 44/142 (30.99%), Postives = 66/142 (46.48%), Query Frame = 3 Query: 138 CGSGVVCGERDTGHGTDGG-----ELGKIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC---YRYCPCPLPGQYYGRGP 539 CG G G +G G G + +++ F + ++ C + FYT AF+ A K +P F + G++ KREIAAFFA ET +CYI ++++ ++ YC R PC +YYGRGP Sbjct: 44 CGDGCQSGPCRSGRGGGGSGGGGANVASVVTSSFFNGI-KNQAGSGCEGKNFYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAFFAHATHET-------------GHFCYISEINK-SNAYCDPTKRQWPCAAGQKYYGRGP 170
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.751e-12 Identity = 44/136 (32.35%), Postives = 64/136 (47.06%), Query Frame = 3 Query: 141 GSGVVCGERDTGHGTDGGELGKIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC---YRYCPCPLPGQYYGRGP 539 G G G G G+ G + +++ F + ++ C + FYT AF+ A A+P F + G E KREIAAFFA ET +CYI ++++ ++ YC R PC +YYGRGP Sbjct: 61 GGGGGGGGGGGGGGSGGANVANVVTDAFFNGI-KNQAGSGCEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFFAHVTHET-------------GHFCYISEINK-SNAYCDASNRQWPCAAGQKYYGRGP 181
BLAST of CX294108 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 6.398e-12 Identity = 47/141 (33.33%), Postives = 65/141 (46.10%), Query Frame = 3 Query: 138 CGSGVVCGERDTGHGTD----GGELGKIISREMFEDLLPHRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC---YRYCPCPLPGQYYGRGP 539 CG+G G + GT GG +G I+++ F ++ C + FYT D+FI AA FP F NS + +REIA FA ET +CYI +++ + DYC R PC Y+GRGP Sbjct: 48 CGTGCRSGPCRSPGGTPSPPGGGSVGSIVTQAFFNGIINQAGG-GCAGKNFYTRDSFINAANTFPNFANS----VTRREIATMFAHFTHET-------------GHFCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGP 170 The following BLAST results are available for this feature:
BLAST of CX294108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294108 ID=CX294108; Name=CX294108; organism=Citrus clementina; type=EST; length=560bpback to top |