CX294110
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_SHEFN (ATP-dependent Clp protease ATP-binding subunit clpX OS=Shewanella frigidimarina (strain NCIMB 400) GN=clpX PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.918e-11 Identity = 32/59 (54.24%), Postives = 44/59 (74.58%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 177 L KQY LF M +V+L F + AL+ IA+KA ++ TGARGLR+I+ESIL + MY+IP + Sbjct: 334 LTKQYSALFEMEDVELEFRDDALQAIAQKAMSRKTGARGLRSIVESILLDTMYDIPSTQ 392
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_RHOCS (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=clpX PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.918e-11 Identity = 34/59 (57.63%), Postives = 45/59 (76.27%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 177 L KQY+RLF M +VKL E+ALR IA KA + TGARGLR+I+ESIL E M+++P ++ Sbjct: 330 LVKQYQRLFEMEDVKLGIHEEALRSIAVKAIQRKTGARGLRSIMESILLEPMFDLPGLQ 388
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_RHISN (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhizobium sp. (strain NGR234) GN=clpX PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.918e-11 Identity = 32/57 (56.14%), Postives = 44/57 (77.19%), Query Frame = 1 Query: 7 KQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 177 KQY+RLF M +V+L F E ALR IAK+A + TGARGLR+I+E IL + M+E+P ++ Sbjct: 335 KQYQRLFEMEDVELTFHEDALREIAKRAIIRKTGARGLRSIMEKILLDTMFELPTLE 391
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_PSEPK (ATP-dependent Clp protease ATP-binding subunit clpX OS=Pseudomonas putida (strain KT2440) GN=clpX PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.918e-11 Identity = 32/59 (54.24%), Postives = 41/59 (69.49%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 177 L KQY +LF M +V L F AL+ +A+KA + TGARGLR+ILE +L + MYEIP K Sbjct: 349 LTKQYAKLFEMESVDLEFRSDALKAVARKALERKTGARGLRSILEGVLLDTMYEIPSKK 407
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_PSEPG (ATP-dependent Clp protease ATP-binding subunit clpX OS=Pseudomonas putida (strain GB-1) GN=clpX PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.918e-11 Identity = 32/59 (54.24%), Postives = 41/59 (69.49%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 177 L KQY +LF M +V L F AL+ +A+KA + TGARGLR+ILE +L + MYEIP K Sbjct: 334 LTKQYAKLFEMESVDLEFRSDALKAVARKALERKTGARGLRSILEGVLLDTMYEIPSKK 392
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_PSEP1 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=clpX PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.918e-11 Identity = 32/59 (54.24%), Postives = 41/59 (69.49%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 177 L KQY +LF M +V L F AL+ +A+KA + TGARGLR+ILE +L + MYEIP K Sbjct: 334 LTKQYAKLFEMESVDLEFRSDALKAVARKALERKTGARGLRSILEGVLLDTMYEIPSKK 392
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_PSEA6 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=clpX PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.918e-11 Identity = 31/58 (53.45%), Postives = 44/58 (75.86%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 174 L KQY LFS+ + +L F E AL+ IAKKA ++ TGARGLR+I+E++L + MYE+P + Sbjct: 334 LTKQYAALFSLEDTELEFREDALQAIAKKAMSRKTGARGLRSIVEAVLLDTMYELPSM 391
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_OCHA4 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=clpX PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.918e-11 Identity = 32/59 (54.24%), Postives = 44/59 (74.58%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 177 L KQY+RLF M +V+L F + ALR IA KA + TGARGLR+I+E IL + M+E+P ++ Sbjct: 332 LVKQYQRLFDMESVELSFHDDALRAIANKAVERKTGARGLRSIMEKILLDTMFELPTLE 390
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_METFK (ATP-dependent Clp protease ATP-binding subunit clpX OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=clpX PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.918e-11 Identity = 33/58 (56.90%), Postives = 41/58 (70.69%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 174 L KQY +LF M V L F E ALR+IAKKA + TGARGLR+I+E L E MY++P + Sbjct: 331 LTKQYIKLFKMEGVDLEFREAALRMIAKKALERKTGARGLRSIMEHALLEIMYDLPSI 388
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_HYDS0 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=clpX PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.918e-11 Identity = 33/56 (58.93%), Postives = 40/56 (71.43%), Query Frame = 1 Query: 7 KQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 174 KQYK L M + L FTE ALR IAK+A + TGARGLRAI+E I+T+ MYE P + Sbjct: 322 KQYKELLRMEGIGLEFTEGALREIAKEAIKRKTGARGLRAIVEKIMTDIMYEAPSL 377 The following BLAST results are available for this feature:
BLAST of CX294110 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 153
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294110 ID=CX294110; Name=CX294110; organism=Citrus clementina; type=EST; length=538bpback to top |