CX294110
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_HAES2 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Haemophilus somnus (strain 2336) GN=clpX PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.809e-12 Identity = 31/59 (52.54%), Postives = 48/59 (81.36%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 177 L KQY+ LFS+ N++L FT++AL +AKKA A+ TGARGLR+I+E++L + MY++P ++ Sbjct: 332 LTKQYQVLFSLENIELEFTQEALIAMAKKALARKTGARGLRSIVETLLLDTMYDLPSIE 390
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_HAES1 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Haemophilus somnus (strain 129Pt) GN=clpX PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.809e-12 Identity = 31/59 (52.54%), Postives = 48/59 (81.36%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 177 L KQY+ LFS+ N++L FT++AL +AKKA A+ TGARGLR+I+E++L + MY++P ++ Sbjct: 332 LTKQYQVLFSLENIELEFTQEALIAMAKKALARKTGARGLRSIVETLLLDTMYDLPSIE 390
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_ALCBS (ATP-dependent Clp protease ATP-binding subunit clpX OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=clpX PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.809e-12 Identity = 33/60 (55.00%), Postives = 44/60 (73.33%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKT 180 L KQY RLF M V+L F E AL+ IA KA + TGARGLR+ILES+L + MY++P +++ Sbjct: 334 LTKQYARLFEMEGVELDFREDALKAIANKAMVRKTGARGLRSILESVLLDTMYQVPSMES 393
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_ACIF5 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=clpX PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.809e-12 Identity = 34/58 (58.62%), Postives = 44/58 (75.86%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 174 L KQY++LF++ V L F +ALR IAKKA A+ TGARGLR+ILE IL + MYE+P + Sbjct: 331 LVKQYQKLFALEGVTLEFRTEALRAIAKKALARKTGARGLRSILEQILLDTMYELPSM 388
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_ACIF2 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=clpX PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.809e-12 Identity = 34/58 (58.62%), Postives = 44/58 (75.86%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 174 L KQY++LF++ V L F +ALR IAKKA A+ TGARGLR+ILE IL + MYE+P + Sbjct: 331 LVKQYQKLFALEGVTLEFRTEALRAIAKKALARKTGARGLRSILEQILLDTMYELPSM 388
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_THETN (ATP-dependent Clp protease ATP-binding subunit clpX OS=Thermoanaerobacter tengcongensis GN=clpX PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 7.587e-12 Identity = 35/60 (58.33%), Postives = 45/60 (75.00%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVKT 180 L KQY++LF M+ VKL F +KAL +IA+ A + TGARGLRAILE I+ + MYEIP +T Sbjct: 327 LVKQYEKLFEMDGVKLEFEKKALDLIAEMALERGTGARGLRAILEDIMLDVMYEIPSDET 386
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_RHOPT (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhodopseudomonas palustris (strain TIE-1) GN=clpX PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 7.587e-12 Identity = 33/59 (55.93%), Postives = 46/59 (77.97%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 177 L KQY+RLF M NV+L F ++AL +A+KA + TGARGLR+ILESIL E M+++P ++ Sbjct: 330 LVKQYQRLFEMENVELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDLPGLE 388
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_RHOPA (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhodopseudomonas palustris GN=clpX PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 7.587e-12 Identity = 33/59 (55.93%), Postives = 46/59 (77.97%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 177 L KQY+RLF M NV+L F ++AL +A+KA + TGARGLR+ILESIL E M+++P ++ Sbjct: 330 LVKQYQRLFEMENVELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDLPGLE 388
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_OLICO (ATP-dependent Clp protease ATP-binding subunit clpX OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=clpX PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 7.587e-12 Identity = 33/59 (55.93%), Postives = 46/59 (77.97%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 177 L KQY+RLF M NV+L F ++AL +A+KA + TGARGLR+ILESIL E M+++P ++ Sbjct: 330 LVKQYQRLFEMENVELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDLPGLE 388
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_NITHX (ATP-dependent Clp protease ATP-binding subunit clpX OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=clpX PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 7.587e-12 Identity = 33/59 (55.93%), Postives = 46/59 (77.97%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 177 L KQY+RLF M N++L F ++AL IA+KA + TGARGLR+ILESIL E M+++P ++ Sbjct: 330 LVKQYQRLFEMENIELTFADEALGAIARKAIERKTGARGLRSILESILLETMFDLPGLE 388 The following BLAST results are available for this feature:
BLAST of CX294110 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 153
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294110 ID=CX294110; Name=CX294110; organism=Citrus clementina; type=EST; length=538bpback to top |