CX294121
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP14_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 4 OS=Arabidopsis thaliana GN=TOPP4 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 3.044e-39 Identity = 74/85 (87.06%), Postives = 82/85 (96.47%), Query Frame = 1 Query: 1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSKF 255 RGVS+TFG DKV++FL KHDLDLVCRAHQVVEDGYEFFA+RQLVT+FSAPNYCGEFDNAGAMMSVDE LMCSFQILKP++KK+KF Sbjct: 231 RGVSYTFGPDKVSEFLTKHDLDLVCRAHQVVEDGYEFFADRQLVTVFSAPNYCGEFDNAGAMMSVDENLMCSFQILKPAEKKTKF 315
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP16_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 6 OS=Arabidopsis thaliana GN=TOPP6 PE=2 SV=2) HSP 1 Score: 160.229 bits (404), Expect = 5.192e-39 Identity = 76/102 (74.51%), Postives = 85/102 (83.33%), Query Frame = 1 Query: 1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSKFGFGSTTT---AKPSNGG 297 RGVS+TFGADKV +FLQ HDLDL+CRAHQVVEDGYEFFA RQLVTIFSAPNYCGEFDNAGA+MSVD++L CSFQILK S+KK +FGF + P GG Sbjct: 218 RGVSYTFGADKVAEFLQTHDLDLICRAHQVVEDGYEFFAKRQLVTIFSAPNYCGEFDNAGALMSVDDSLTCSFQILKASEKKGRFGFNNNVPRPGTPPHKGG 319
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP1_NEUCR (Serine/threonine-protein phosphatase PP1 OS=Neurospora crassa GN=ppp-1 PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 1.973e-38 Identity = 72/86 (83.72%), Postives = 81/86 (94.19%), Query Frame = 1 Query: 1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSKFG 258 RGVSFTFG D V+ FLQKHD+DL+CRAHQVVEDGYEFF+ RQLVT+FSAPNYCGEFDNAGAMMSVDE+L+CSFQILKP++KK KFG Sbjct: 221 RGVSFTFGPDVVSRFLQKHDMDLICRAHQVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGAMMSVDESLLCSFQILKPAEKKQKFG 306
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP12_TOBAC (Serine/threonine-protein phosphatase PP1 isozyme 2 OS=Nicotiana tabacum GN=NPP2 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 2.577e-38 Identity = 72/85 (84.71%), Postives = 80/85 (94.12%), Query Frame = 1 Query: 1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSKF 255 RGVS+TFG+DKV +FL +HD+DLVCRAHQVVEDGYEFFA RQLVTIFSAPNYCGEFDNAGAMMSVDE LMCSFQILKP+D+K +F Sbjct: 225 RGVSYTFGSDKVAEFLMQHDMDLVCRAHQVVEDGYEFFAERQLVTIFSAPNYCGEFDNAGAMMSVDENLMCSFQILKPTDRKPRF 309
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP11_TOBAC (Serine/threonine-protein phosphatase PP1 isozyme 1 OS=Nicotiana tabacum GN=NPP1 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 3.365e-38 Identity = 72/85 (84.71%), Postives = 80/85 (94.12%), Query Frame = 1 Query: 1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSKF 255 RGVS+TFG DKV +FL +HD+DLVCRAHQVVEDGYEFFA RQLVTIFSAPNYCGEFDNAGAMMSVDE+LMCSFQILKP+D+K +F Sbjct: 232 RGVSYTFGPDKVAEFLMQHDMDLVCRAHQVVEDGYEFFAERQLVTIFSAPNYCGEFDNAGAMMSVDESLMCSFQILKPTDRKPRF 316
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP1B_DROME (Serine/threonine-protein phosphatase beta isoform OS=Drosophila melanogaster GN=flw PE=1 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 4.395e-38 Identity = 70/96 (72.92%), Postives = 85/96 (88.54%), Query Frame = 1 Query: 1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSKFGFGSTTTAKPS 288 RGVSFTFG D V+ FL +H+LDL+CRAHQVVEDGYEFFA RQLVT+FSAPNYCGEFDNAG MM+VD+TLMCSFQILKPS+KK+K+ + +++P+ Sbjct: 220 RGVSFTFGVDVVSKFLNRHELDLICRAHQVVEDGYEFFARRQLVTLFSAPNYCGEFDNAGGMMTVDDTLMCSFQILKPSEKKAKYLYSGMNSSRPT 315
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP1A_RAT (Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Rattus norvegicus GN=Ppp1ca PE=1 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 4.395e-38 Identity = 75/87 (86.21%), Postives = 80/87 (91.95%), Query Frame = 1 Query: 1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDK-KSKFG 258 RGVSFTFGA+ V FL KHDLDL+CRAHQVVEDGYEFFA RQLVT+FSAPNYCGEFDNAGAMMSVDETLMCSFQILKP+DK K K+G Sbjct: 221 RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKNKGKYG 307
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP1A_RABIT (Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Oryctolagus cuniculus GN=PPP1CA PE=1 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 4.395e-38 Identity = 75/87 (86.21%), Postives = 80/87 (91.95%), Query Frame = 1 Query: 1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDK-KSKFG 258 RGVSFTFGA+ V FL KHDLDL+CRAHQVVEDGYEFFA RQLVT+FSAPNYCGEFDNAGAMMSVDETLMCSFQILKP+DK K K+G Sbjct: 221 RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKNKGKYG 307
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP1A_MOUSE (Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Mus musculus GN=Ppp1ca PE=1 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 4.395e-38 Identity = 75/87 (86.21%), Postives = 80/87 (91.95%), Query Frame = 1 Query: 1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDK-KSKFG 258 RGVSFTFGA+ V FL KHDLDL+CRAHQVVEDGYEFFA RQLVT+FSAPNYCGEFDNAGAMMSVDETLMCSFQILKP+DK K K+G Sbjct: 221 RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKNKGKYG 307
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP1A_HUMAN (Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Homo sapiens GN=PPP1CA PE=1 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 4.395e-38 Identity = 75/87 (86.21%), Postives = 80/87 (91.95%), Query Frame = 1 Query: 1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDK-KSKFG 258 RGVSFTFGA+ V FL KHDLDL+CRAHQVVEDGYEFFA RQLVT+FSAPNYCGEFDNAGAMMSVDETLMCSFQILKP+DK K K+G Sbjct: 221 RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKNKGKYG 307 The following BLAST results are available for this feature:
BLAST of CX294121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 134
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294121 ID=CX294121; Name=CX294121; organism=Citrus clementina; type=EST; length=521bpback to top |