CX294121

Overview
NameCX294121
Unique NameCX294121
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length521
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP1A_CANFA (Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Canis familiaris GN=PPP1CA PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 4.395e-38
Identity = 75/87 (86.21%), Postives = 80/87 (91.95%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDK-KSKFG 258
            RGVSFTFGA+ V  FL KHDLDL+CRAHQVVEDGYEFFA RQLVT+FSAPNYCGEFDNAGAMMSVDETLMCSFQILKP+DK K K+G
Sbjct:  221 RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKNKGKYG 307          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP1A_BOVIN (Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Bos taurus GN=PPP1CA PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 4.395e-38
Identity = 75/87 (86.21%), Postives = 80/87 (91.95%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDK-KSKFG 258
            RGVSFTFGA+ V  FL KHDLDL+CRAHQVVEDGYEFFA RQLVT+FSAPNYCGEFDNAGAMMSVDETLMCSFQILKP+DK K K+G
Sbjct:  221 RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKNKGKYG 307          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP13_TOBAC (Serine/threonine-protein phosphatase PP1 isozyme 3 OS=Nicotiana tabacum GN=NPP3 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 5.740e-38
Identity = 72/85 (84.71%), Postives = 80/85 (94.12%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSKF 255
            RGVS+TFG DKV++FL KHDLDLVCRAHQVVEDGYEFFA  +LVTIFSAPNYCGEFDNAGAMMSVDE L+CSFQILKP++KK+KF
Sbjct:  218 RGVSYTFGPDKVSEFLSKHDLDLVCRAHQVVEDGYEFFAESELVTIFSAPNYCGEFDNAGAMMSVDENLLCSFQILKPAEKKNKF 302          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP1_MAIZE (Serine/threonine-protein phosphatase PP1 OS=Zea mays GN=PP1 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 7.497e-38
Identity = 76/95 (80.00%), Postives = 84/95 (88.42%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDK------KSKFGFGS 267
            RGVSFTFG DKV++FL+KHDLDL+CRAHQVVEDGYEFFA+RQLVTIFSAPNYCGEFDNAGAMMSVD+TLMCSFQILKP+ K       +K GF S
Sbjct:  218 RGVSFTFGPDKVSEFLEKHDLDLICRAHQVVEDGYEFFASRQLVTIFSAPNYCGEFDNAGAMMSVDDTLMCSFQILKPARKMMGGSTNNKSGFKS 312          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: GLC7B_CAEEL (Serine/threonine-protein phosphatase PP1-beta OS=Caenorhabditis elegans GN=gsp-2 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 7.497e-38
Identity = 78/115 (67.83%), Postives = 88/115 (76.52%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSKFGFGSTTTAKPSNGGNVFGSTTTAKPGNTPA 345
            RGVSFTFG + V  FL KHDLDL+CRAHQVVEDGYEFFA RQLVT+FSAPNYCGEFDNAG+MM+VDETLMCSFQILKP+DKK K+ +G+         G V  +     P N PA
Sbjct:  220 RGVSFTFGPEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGSMMTVDETLMCSFQILKPADKK-KYPYGA---------GGVGSNRPVTPPRNAPA 324          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: GLC7B_CAEBR (Serine/threonine-protein phosphatase PP1-beta OS=Caenorhabditis briggsae GN=gsp-2 PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 7.497e-38
Identity = 78/115 (67.83%), Postives = 88/115 (76.52%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSKFGFGSTTTAKPSNGGNVFGSTTTAKPGNTPA 345
            RGVSFTFG + V  FL KHDLDL+CRAHQVVEDGYEFFA RQLVT+FSAPNYCGEFDNAG+MM+VDETLMCSFQILKP+DKK K+ +G+         G V  +     P N PA
Sbjct:  220 RGVSFTFGPEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGSMMTVDETLMCSFQILKPADKK-KYPYGA---------GGVGSNRPVTPPRNAPA 324          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP17_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 7 OS=Arabidopsis thaliana GN=TOPP7 PE=2 SV=3)

HSP 1 Score: 155.606 bits (392), Expect = 1.279e-37
Identity = 75/96 (78.12%), Postives = 84/96 (87.50%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSKFGFGSTTTAKPS 288
            RGVS+TFG+D V+ FL++ DLDL+CRAHQVVEDG+EFFAN+QLVTIFSAPNYCGEFDNAGAMMSV E L CSFQILK +DKKSKF FGS   AK S
Sbjct:  217 RGVSYTFGSDIVSGFLKRLDLDLICRAHQVVEDGFEFFANKQLVTIFSAPNYCGEFDNAGAMMSVSEDLTCSFQILKSNDKKSKFSFGSRGGAKTS 312          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP11_SCHPO (Serine/threonine-protein phosphatase PP1-1 OS=Schizosaccharomyces pombe GN=dis2 PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.279e-37
Identity = 70/87 (80.46%), Postives = 81/87 (93.10%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSKFGF 261
            RGVSFTFG D V+ FL KHD+DLVCRAHQVVEDGYEFF+ RQLVT+FSAPNYCGEFDNAGAMMSVDE+L+CSFQILKP++KK ++G+
Sbjct:  220 RGVSFTFGPDVVSRFLHKHDMDLVCRAHQVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGAMMSVDESLLCSFQILKPAEKKQRYGY 306          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP12_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 2 OS=Arabidopsis thaliana GN=TOPP2 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 1.670e-37
Identity = 71/85 (83.53%), Postives = 81/85 (95.29%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSKF 255
            RGVS+TFG DKV +FL K+D+DL+CRAHQVVEDGYEFFA+RQLVTIFSAPNYCGEFDNAGAMMSVDE+LMCSFQILKP+D+K +F
Sbjct:  227 RGVSYTFGPDKVAEFLIKNDMDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDESLMCSFQILKPADRKPRF 311          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PPIG_XENTR (Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Xenopus tropicalis GN=ppp1cc PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 2.181e-37
Identity = 72/82 (87.80%), Postives = 77/82 (93.90%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKK 246
            RGVSFTFGA+ V  FL KHDLDL+CRAHQVVEDGYEFFA RQLVT+FSAPNYCGEFDNAGAMMSVDETLMCSFQILKP++KK
Sbjct:  221 RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKK 302          
The following BLAST results are available for this feature:
BLAST of CX294121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 134
Match NameE-valueIdentityDescription
PP1A_CANFA4.395e-3886.21Serine/threonine-protein phosphatase PP1-alpha cat... [more]
PP1A_BOVIN4.395e-3886.21Serine/threonine-protein phosphatase PP1-alpha cat... [more]
PP13_TOBAC5.740e-3884.71Serine/threonine-protein phosphatase PP1 isozyme 3... [more]
PP1_MAIZE7.497e-3880.00Serine/threonine-protein phosphatase PP1 OS=Zea ma... [more]
GLC7B_CAEEL7.497e-3867.83Serine/threonine-protein phosphatase PP1-beta OS=C... [more]
GLC7B_CAEBR7.497e-3867.83Serine/threonine-protein phosphatase PP1-beta OS=C... [more]
PP17_ARATH1.279e-3778.13Serine/threonine-protein phosphatase PP1 isozyme 7... [more]
PP11_SCHPO1.279e-3780.46Serine/threonine-protein phosphatase PP1-1 OS=Schi... [more]
PP12_ARATH1.670e-3783.53Serine/threonine-protein phosphatase PP1 isozyme 2... [more]
PPIG_XENTR2.181e-3787.80Serine/threonine-protein phosphatase PP1-gamma cat... [more]

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Properties
Property NameValue
Genbank descriptionC05011D02SK AbsAOv1 Citrus clementina cDNA clone C05011D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294121 ID=CX294121; Name=CX294121; organism=Citrus clementina; type=EST; length=521bp
AGGGGAGTTTCATTTACTTTTGGTGCTGACAAAGTGACAGACTTTCTGCA
GAAGCATGATCTGGATCTCGTTTGTCGTGCTCACCAGGTCGTAGAGGATG
GATATGAGTTCTTTGCCAACCGACAGCTTGTTACTATTTTTTCAGCACCT
AATTATTGCGGGGAGTTTGATAATGCTGGTGCAATGATGTCTGTTGATGA
GACACTAATGTGCTCTTTCCAAATATTAAAGCCCTCAGACAAGAAGTCGA
AGTTCGGTTTTGGGAGCACAACTACTGCAAAGCCTTCCAACGGTGGCAAT
GTCTTTGGAAGCACAACTACAGCCAAGCCTGGAAACACACCTGCAGGAGT
CAAGTCTTTCCTTGGTAAGGTATGACAAATTGGTTTGCTGGATAGAGGCC
AACTTCCAGTGGGTTAATGCACATGCGGGGGACTGCAATTAAAGTAATAT
TCTCAGGTCTTTTTGATTTTTCTATAATATTTTGAATTGTATAAAATTGC
GACAGCAAGAGAAAAGAAGTC
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