CX294121

Overview
NameCX294121
Unique NameCX294121
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length521
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP12_DROME (Serine/threonine-protein phosphatase alpha-2 isoform OS=Drosophila melanogaster GN=Pp1-87B PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 8.289e-37
Identity = 70/84 (83.33%), Postives = 77/84 (91.67%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSK 252
            RGVSFTFGA+ V  FLQKH+ DL+CRAHQVVEDGYEFFA R LVT+FSAPNYCGEFDNAGAMMSVD+TLMCSFQILKP+DK+ K
Sbjct:  219 RGVSFTFGAEVVAKFLQKHEFDLICRAHQVVEDGYEFFAKRMLVTLFSAPNYCGEFDNAGAMMSVDDTLMCSFQILKPADKRKK 302          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP11_DROME (Serine/threonine-protein phosphatase alpha-1 isoform OS=Drosophila melanogaster GN=Pp1alpha-96A PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 8.289e-37
Identity = 74/104 (71.15%), Postives = 81/104 (77.88%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKK----SKFGFGSTTTAKPSNGGN 300
            RGVSFTFGA+ V  FLQKH+ DL+CRAHQVVEDGYEFFA RQLVT+FSAPNYCGEFDNAGAMMSVD+TLMCSFQILKP+DK+      FG        P    N
Sbjct:  219 RGVSFTFGAEVVGKFLQKHEFDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDDTLMCSFQILKPADKRRFVYPNFGSSGRPLTPPRGANN 322          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP1_DICDI (Serine/threonine-protein phosphatase PP1 OS=Dictyostelium discoideum GN=pppB PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.847e-36
Identity = 72/82 (87.80%), Postives = 76/82 (92.68%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKK 246
            RGVS+TFGAD V  FL+KHDLDLVCRAHQVVEDGYEFFA RQLVT+FSAPNY GEFDNAGAMM VDETLMCSFQILKP+DKK
Sbjct:  217 RGVSYTFGADVVESFLKKHDLDLVCRAHQVVEDGYEFFAKRQLVTLFSAPNYFGEFDNAGAMMGVDETLMCSFQILKPADKK 298          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP12_SCHPO (Serine/threonine-protein phosphatase PP1-2 OS=Schizosaccharomyces pombe GN=sds21 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 5.373e-36
Identity = 70/94 (74.47%), Postives = 80/94 (85.11%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSKFGFGSTTTAK 282
            RGVS+TFGAD V+ FLQKHDLDL+CRAHQVVEDGYEFF  RQLVTIFSAPNYCGEFDN GAMMSV+E L+CSFQILKP++K+ +    S   +K
Sbjct:  217 RGVSYTFGADVVSRFLQKHDLDLICRAHQVVEDGYEFFGKRQLVTIFSAPNYCGEFDNVGAMMSVNEDLLCSFQILKPAEKRQRVSQSSIKESK 310          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP12_YEAST (Serine/threonine-protein phosphatase PP1-2 OS=Saccharomyces cerevisiae GN=GLC7 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 3.850e-34
Identity = 66/81 (81.48%), Postives = 74/81 (91.36%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDK 243
            RGVSFTFG D V  FLQK D++L+CRAHQVVEDGYEFF+ RQLVT+FSAPNYCGEFDNAGAMMSVDE+L+CSFQILKP+ K
Sbjct:  220 RGVSFTFGPDVVNRFLQKQDMELICRAHQVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGAMMSVDESLLCSFQILKPAQK 300          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP18_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 8 OS=Arabidopsis thaliana GN=TOPP8 PE=2 SV=3)

HSP 1 Score: 135.961 bits (341), Expect = 1.049e-31
Identity = 62/83 (74.70%), Postives = 74/83 (89.16%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKS 249
            RG+S TFGADKV +FL K+DLDL+CR HQVVEDGYEFFA R+LVTIFSAPNY GEFDNAGA++SVDE+L+CSF+I+KP+   S
Sbjct:  223 RGISCTFGADKVAEFLDKNDLDLICRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDESLVCSFEIMKPAPASS 305          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP1_PHAVU (Serine/threonine-protein phosphatase PP1 OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.789e-31
Identity = 63/83 (75.90%), Postives = 74/83 (89.16%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKS 249
            RGVS TFG D V +FL K+DLDLVCR HQVVEDGYEFFA R+LVTIFSAPNY GEFDNAGA++SVD++L+CSF+ILKP+D+ S
Sbjct:  215 RGVSCTFGPDVVAEFLDKNDLDLVCRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDDSLVCSFEILKPADRAS 297          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP1_BRANA (Serine/threonine-protein phosphatase PP1 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.789e-31
Identity = 61/79 (77.22%), Postives = 73/79 (92.41%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPS 237
            RG+S TFGADKV +FL K+DLDL+CR HQVVEDGYEFFA R+LVTIFSAPNY GEFDNAGA++SVDE+L+CSF+I+KP+
Sbjct:  159 RGISCTFGADKVAEFLDKNDLDLICRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDESLVCSFEIMKPA 237          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP19_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 9 OS=Arabidopsis thaliana GN=TOPP9 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 3.051e-31
Identity = 62/83 (74.70%), Postives = 73/83 (87.95%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKS 249
            RG+S TFGAD V DFL K+DLDL+CR HQVVEDGYEFFA R+LVTIFSAPNY GEFDNAGA++SVD++L+CSF+ILKP+   S
Sbjct:  223 RGISCTFGADVVADFLDKNDLDLICRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDQSLVCSFEILKPAPASS 305          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PPZ_SCHPO (Serine/threonine-protein phosphatase PP-Z OS=Schizosaccharomyces pombe GN=pzh1 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 3.491e-27
Identity = 53/81 (65.43%), Postives = 65/81 (80.25%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDK 243
            RGVSF F  + +  FL KHD DL+CRAH VVEDGYEFF +R L T+FSAPNYCGEFDN GA+MSV+  L+CSF+++KP D+
Sbjct:  405 RGVSFVFNKNVIRQFLAKHDFDLICRAHMVVEDGYEFFNDRTLCTVFSAPNYCGEFDNWGAVMSVNSELLCSFELIKPLDQ 485          
The following BLAST results are available for this feature:
BLAST of CX294121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 134
Match NameE-valueIdentityDescription
PP12_DROME8.289e-3783.33Serine/threonine-protein phosphatase alpha-2 isofo... [more]
PP11_DROME8.289e-3771.15Serine/threonine-protein phosphatase alpha-1 isofo... [more]
PP1_DICDI1.847e-3687.80Serine/threonine-protein phosphatase PP1 OS=Dictyo... [more]
PP12_SCHPO5.373e-3674.47Serine/threonine-protein phosphatase PP1-2 OS=Schi... [more]
PP12_YEAST3.850e-3481.48Serine/threonine-protein phosphatase PP1-2 OS=Sacc... [more]
PP18_ARATH1.049e-3174.70Serine/threonine-protein phosphatase PP1 isozyme 8... [more]
PP1_PHAVU1.789e-3175.90Serine/threonine-protein phosphatase PP1 OS=Phaseo... [more]
PP1_BRANA1.789e-3177.22Serine/threonine-protein phosphatase PP1 (Fragment... [more]
PP19_ARATH3.051e-3174.70Serine/threonine-protein phosphatase PP1 isozyme 9... [more]
PPZ_SCHPO3.491e-2765.43Serine/threonine-protein phosphatase PP-Z OS=Schiz... [more]

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Properties
Property NameValue
Genbank descriptionC05011D02SK AbsAOv1 Citrus clementina cDNA clone C05011D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294121 ID=CX294121; Name=CX294121; organism=Citrus clementina; type=EST; length=521bp
AGGGGAGTTTCATTTACTTTTGGTGCTGACAAAGTGACAGACTTTCTGCA
GAAGCATGATCTGGATCTCGTTTGTCGTGCTCACCAGGTCGTAGAGGATG
GATATGAGTTCTTTGCCAACCGACAGCTTGTTACTATTTTTTCAGCACCT
AATTATTGCGGGGAGTTTGATAATGCTGGTGCAATGATGTCTGTTGATGA
GACACTAATGTGCTCTTTCCAAATATTAAAGCCCTCAGACAAGAAGTCGA
AGTTCGGTTTTGGGAGCACAACTACTGCAAAGCCTTCCAACGGTGGCAAT
GTCTTTGGAAGCACAACTACAGCCAAGCCTGGAAACACACCTGCAGGAGT
CAAGTCTTTCCTTGGTAAGGTATGACAAATTGGTTTGCTGGATAGAGGCC
AACTTCCAGTGGGTTAATGCACATGCGGGGGACTGCAATTAAAGTAATAT
TCTCAGGTCTTTTTGATTTTTCTATAATATTTTGAATTGTATAAAATTGC
GACAGCAAGAGAAAAGAAGTC
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