CX294121

Overview
NameCX294121
Unique NameCX294121
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length521
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP12_TRYBB (Serine/threonine-protein phosphatase PP1(5.9) OS=Trypanosoma brucei brucei PE=3 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 5.041e-26
Identity = 56/87 (64.37%), Postives = 66/87 (75.86%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSKFGF 261
            RGVS+TF    V  F +K DLDL+CRAHQVV+ GYEFFA RQLVT+FSAPNYC EFDNAGA M VDE LMCSF  ++P+    ++ F
Sbjct:  260 RGVSWTFSESVVKSFNKKFDLDLICRAHQVVDAGYEFFAARQLVTVFSAPNYCDEFDNAGAFMCVDENLMCSFVQIEPTRTLLRYFF 346          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP11_TRYBB (Serine/threonine-protein phosphatase PP1(4.8) OS=Trypanosoma brucei brucei PE=3 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 8.598e-26
Identity = 56/87 (64.37%), Postives = 65/87 (74.71%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSKFGF 261
            RGVS+TF    V  F +K DLDL+CRAHQVV+ GYEFFA RQLVT+FSAPNYC EFDNAGA M VDE  MCSF  ++P+    K+ F
Sbjct:  260 RGVSWTFSESVVKSFNKKFDLDLICRAHQVVDAGYEFFAARQLVTVFSAPNYCDEFDNAGAFMCVDENFMCSFIRIEPTRTLLKYFF 346          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PPZ2_YEAST (Serine/threonine-protein phosphatase PP-Z2 OS=Saccharomyces cerevisiae GN=PPZ2 PE=1 SV=4)

HSP 1 Score: 113.235 bits (282), Expect = 7.279e-25
Identity = 52/80 (65.00%), Postives = 61/80 (76.25%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSD 240
            RGVSF +    +  FL K   DLVCRAH VVEDGYEFF +R LVT+FSAPNYCGEFDN GA+M+V E L+CSF++L P D
Sbjct:  611 RGVSFCYNKVAINKFLNKFGFDLVCRAHMVVEDGYEFFNDRSLVTVFSAPNYCGEFDNWGAVMTVSEGLLCSFELLDPLD 690          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PPZ1_YEAST (Serine/threonine-protein phosphatase PP-Z1 OS=Saccharomyces cerevisiae GN=PPZ1 PE=1 SV=4)

HSP 1 Score: 113.235 bits (282), Expect = 7.279e-25
Identity = 52/80 (65.00%), Postives = 61/80 (76.25%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSD 240
            RGVS+ +    +  FL K   DLVCRAH VVEDGYEFF +R LVT+FSAPNYCGEFDN GA+MSV E L+CSF++L P D
Sbjct:  576 RGVSYCYNKVAINKFLNKFGFDLVCRAHMVVEDGYEFFNDRSLVTVFSAPNYCGEFDNWGAVMSVSEGLLCSFELLDPLD 655          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PPY_DROME (Serine/threonine-protein phosphatase PP-Y OS=Drosophila melanogaster GN=PpY-55A PE=2 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 3.612e-24
Identity = 54/81 (66.67%), Postives = 62/81 (76.54%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDK 243
            RGVSFTF    V DFL+  DL L+ RAH+VVEDGYEFFANRQLVT+FSAPNYCG  +NAG +MSV   L+CSF I+ P  K
Sbjct:  217 RGVSFTFDKVIVRDFLKAFDLQLMVRAHEVVEDGYEFFANRQLVTVFSAPNYCGMMNNAGGVMSVSTDLICSFVIILPCHK 297          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PPQ1_YEAST (Serine/threonine-protein phosphatase PPQ OS=Saccharomyces cerevisiae GN=PPQ1 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 6.162e-24
Identity = 52/84 (61.90%), Postives = 61/84 (72.62%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSK 252
            RGVS+TF    V DF  K   DL+ R H VVEDGYEFFA ++ VTIFSAPNYCGEF N GA+MSV   +MCSF++LKP   K+K
Sbjct:  458 RGVSYTFSKRNVLDFCAKFKFDLILRGHMVVEDGYEFFARKKFVTIFSAPNYCGEFHNWGAVMSVTTGMMCSFELLKPRALKNK 541          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: YSD1_CAEEL (Putative serine/threonine-protein phosphatase C23G10.1 OS=Caenorhabditis elegans GN=C23G10.1 PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 5.586e-17
Identity = 40/80 (50.00%), Postives = 55/80 (68.75%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSD 240
            RG S  FG ++V +  +  D+DL+ R HQVV+DGYEFFA ++LVT+FSAP+Y   F N+ A+  V   L  SF++LKP D
Sbjct:  255 RGASVQFGENEVKEMCKLLDIDLIVRGHQVVQDGYEFFAGKKLVTVFSAPHYMQSFTNSAAVCKVSAGLEVSFEVLKPED 334          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PPX4_PARTE (Serine/threonine-protein phosphatase PP-X homolog 4 OS=Paramecium tetraurelia GN=Ppx4 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 8.066e-16
Identity = 35/84 (41.67%), Postives = 58/84 (69.05%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSK 252
            RG  + FG D V DF +K++++L+CRAHQ+V +GY    N QLVT++SAPNYC    N  +++ +DE L  S++I + + ++++
Sbjct:  210 RGAGYLFGGDVVDDFNRKNNIELICRAHQLVMEGYRVMFNEQLVTVWSAPNYCYRCGNVASILELDENLAKSYKIFEAAPQENR 293          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: YT91_CAEEL (Putative serine/threonine-protein phosphatase C06A1.3 OS=Caenorhabditis elegans GN=C06A1.3 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.376e-15
Identity = 36/78 (46.15%), Postives = 52/78 (66.67%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKP 234
            RG+S+ FG   V    +  ++DL+ RAHQVV+DGYE    R+L+T+FS PNYC +F NA A++ ++  L  SFQ + P
Sbjct:  250 RGISYMFGKGVVEQACKSLEIDLIIRAHQVVQDGYEMMTGRRLITVFSVPNYCAQFTNAAAVVCLNANLQISFQQMIP 327          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PPX3_PARTE (Serine/threonine-protein phosphatase PP-X homolog 3 OS=Paramecium tetraurelia GN=Ppx3 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 5.228e-15
Identity = 34/81 (41.98%), Postives = 54/81 (66.67%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDK 243
            RG  + FG D V DF +K++++L+CRAHQ+V +GY    N QLVT++SAPNYC    N  +++ +DE L   ++I + + +
Sbjct:  210 RGAGYLFGGDVVDDFNRKNNIELICRAHQLVMEGYRVMFNEQLVTVWSAPNYCYRCGNVASILELDENLTKQYKIFEAAQE 290          
The following BLAST results are available for this feature:
BLAST of CX294121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 134
Match NameE-valueIdentityDescription
PP12_TRYBB5.041e-2664.37Serine/threonine-protein phosphatase PP1(5.9) OS=T... [more]
PP11_TRYBB8.598e-2664.37Serine/threonine-protein phosphatase PP1(4.8) OS=T... [more]
PPZ2_YEAST7.279e-2565.00Serine/threonine-protein phosphatase PP-Z2 OS=Sacc... [more]
PPZ1_YEAST7.279e-2565.00Serine/threonine-protein phosphatase PP-Z1 OS=Sacc... [more]
PPY_DROME3.612e-2466.67Serine/threonine-protein phosphatase PP-Y OS=Droso... [more]
PPQ1_YEAST6.162e-2461.90Serine/threonine-protein phosphatase PPQ OS=Saccha... [more]
YSD1_CAEEL5.586e-1750.00Putative serine/threonine-protein phosphatase C23G... [more]
PPX4_PARTE8.066e-1641.67Serine/threonine-protein phosphatase PP-X homolog ... [more]
YT91_CAEEL1.376e-1546.15Putative serine/threonine-protein phosphatase C06A... [more]
PPX3_PARTE5.228e-1541.98Serine/threonine-protein phosphatase PP-X homolog ... [more]

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Properties
Property NameValue
Genbank descriptionC05011D02SK AbsAOv1 Citrus clementina cDNA clone C05011D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294121 ID=CX294121; Name=CX294121; organism=Citrus clementina; type=EST; length=521bp
AGGGGAGTTTCATTTACTTTTGGTGCTGACAAAGTGACAGACTTTCTGCA
GAAGCATGATCTGGATCTCGTTTGTCGTGCTCACCAGGTCGTAGAGGATG
GATATGAGTTCTTTGCCAACCGACAGCTTGTTACTATTTTTTCAGCACCT
AATTATTGCGGGGAGTTTGATAATGCTGGTGCAATGATGTCTGTTGATGA
GACACTAATGTGCTCTTTCCAAATATTAAAGCCCTCAGACAAGAAGTCGA
AGTTCGGTTTTGGGAGCACAACTACTGCAAAGCCTTCCAACGGTGGCAAT
GTCTTTGGAAGCACAACTACAGCCAAGCCTGGAAACACACCTGCAGGAGT
CAAGTCTTTCCTTGGTAAGGTATGACAAATTGGTTTGCTGGATAGAGGCC
AACTTCCAGTGGGTTAATGCACATGCGGGGGACTGCAATTAAAGTAATAT
TCTCAGGTCTTTTTGATTTTTCTATAATATTTTGAATTGTATAAAATTGC
GACAGCAAGAGAAAAGAAGTC
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