CX294121

Overview
NameCX294121
Unique NameCX294121
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length521
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PPX2_ARATH (Serine/threonine-protein phosphatase PP-X isozyme 2 OS=Arabidopsis thaliana GN=PPX2 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 8.918e-15
Identity = 34/84 (40.48%), Postives = 54/84 (64.29%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSK 252
            RG  F FG   VT F   +++D +CRAHQ+V +GY++  N Q+VT++SAPNYC    N  A++ +DE L   F++   + ++S+
Sbjct:  209 RGAGFLFGGSVVTSFNHSNNIDYICRAHQLVMEGYKWMFNSQIVTVWSAPNYCYRCGNVAAILELDENLNKEFRVFDAAPQESR 292          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PPE1_SCHPO (Serine/threonine-protein phosphatase ppe1 OS=Schizosaccharomyces pombe GN=ppe1 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.389e-14
Identity = 40/96 (41.67%), Postives = 62/96 (64.58%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEF-FANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQI----------LKPSDKKSKF 255
            RG  + FG+   T+F Q +DL L+ RAHQ+V++GY++ FA++ LVT++SAPNYC    N  ++M VDE+L   F+I          + PS K+S++
Sbjct:  208 RGAGWLFGSKVTTEFSQINDLTLIARAHQLVQEGYKYHFADKNLVTVWSAPNYCYRCGNVASVMKVDESLEPEFRIFSAVADEDRTVPPSRKRSEY 303          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP4C_DICDI (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Dictyostelium discoideum GN=ppp4c PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.426e-14
Identity = 34/84 (40.48%), Postives = 54/84 (64.29%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSK 252
            RG  F FG D V  F   ++L+ +CRAHQ+V +G+++  N  LVT++SAPNYC    N  A++ +DE L  +F I + + ++S+
Sbjct:  209 RGAGFLFGEDVVQKFNHDNNLEFICRAHQLVMEGFKYMFNETLVTVWSAPNYCYRCGNVAAILQLDENLKKNFAIFEAAPQESR 292          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: BSL1_ORYSJ (Serine/threonine-protein phosphatase BSL1 homolog OS=Oryza sativa subsp. japonica GN=BSL1 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 7.550e-14
Identity = 35/73 (47.95%), Postives = 53/73 (72.60%), Query Frame = 1
Query:   16 TFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKP 234
            TFG D+VT+F +++ L L+ RAH+ V DG+E FA+ QL+T+FSA NYCG  +NAGA++ V   L+   +++ P
Sbjct:  762 TFGPDRVTEFCKRNRLQLIIRAHECVMDGFERFAHGQLITLFSATNYCGTANNAGAILVVGRGLVIVPKLIHP 834          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP4C_RABIT (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Oryctolagus cuniculus GN=PPP4C PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 9.860e-14
Identity = 32/84 (38.10%), Postives = 55/84 (65.48%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSK 252
            RG  + FG+D V  F   +D+D++CRAHQ+V +GY++  N  ++T++SAPNYC    N  A++ +DE L   F I + + ++++
Sbjct:  211 RGAGYLFGSDVVAQFNAANDIDMICRAHQLVMEGYKWHFNETVLTVWSAPNYCYRCGNVAAILELDEHLQKDFIIFEAAPQETR 294          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP4C_PONAB (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Pongo abelii GN=PPP4C PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 9.860e-14
Identity = 32/84 (38.10%), Postives = 55/84 (65.48%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSK 252
            RG  + FG+D V  F   +D+D++CRAHQ+V +GY++  N  ++T++SAPNYC    N  A++ +DE L   F I + + ++++
Sbjct:  211 RGAGYLFGSDVVAQFNAANDIDMICRAHQLVMEGYKWHFNETVLTVWSAPNYCYRCGNVAAILELDEHLQKDFIIFEAAPQETR 294          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP4C_MOUSE (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Mus musculus GN=Ppp4c PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 9.860e-14
Identity = 32/84 (38.10%), Postives = 55/84 (65.48%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSK 252
            RG  + FG+D V  F   +D+D++CRAHQ+V +GY++  N  ++T++SAPNYC    N  A++ +DE L   F I + + ++++
Sbjct:  211 RGAGYLFGSDVVAQFNAANDIDMICRAHQLVMEGYKWHFNETVLTVWSAPNYCYRCGNVAAILELDEHLQKDFIIFEAAPQETR 294          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP4C_HUMAN (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Homo sapiens GN=PPP4C PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 9.860e-14
Identity = 32/84 (38.10%), Postives = 55/84 (65.48%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSK 252
            RG  + FG+D V  F   +D+D++CRAHQ+V +GY++  N  ++T++SAPNYC    N  A++ +DE L   F I + + ++++
Sbjct:  211 RGAGYLFGSDVVAQFNAANDIDMICRAHQLVMEGYKWHFNETVLTVWSAPNYCYRCGNVAAILELDEHLQKDFIIFEAAPQETR 294          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP4C_BOVIN (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Bos taurus GN=PPP4C PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 9.860e-14
Identity = 32/84 (38.10%), Postives = 55/84 (65.48%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSK 252
            RG  + FG+D V  F   +D+D++CRAHQ+V +GY++  N  ++T++SAPNYC    N  A++ +DE L   F I + + ++++
Sbjct:  211 RGAGYLFGSDVVAQFNAANDIDMICRAHQLVMEGYKWHFNETVLTVWSAPNYCYRCGNVAAILELDEHLQKDFIIFEAAPQETR 294          
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP4CB_DANRE (Serine/threonine-protein phosphatase 4 catalytic subunit B OS=Danio rerio GN=ppp4cb PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 9.860e-14
Identity = 32/84 (38.10%), Postives = 55/84 (65.48%), Query Frame = 1
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSK 252
            RG  + FG+D V  F   +D+D++CRAHQ+V +GY++  N  ++T++SAPNYC    N  A++ +DE L   F I + + ++++
Sbjct:  211 RGAGYLFGSDVVAQFNAANDIDMICRAHQLVMEGYKWHFNETVLTVWSAPNYCYRCGNVAAILELDEHLQKEFIIFEAAPQETR 294          
The following BLAST results are available for this feature:
BLAST of CX294121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 134
Match NameE-valueIdentityDescription
PPX2_ARATH8.918e-1540.48Serine/threonine-protein phosphatase PP-X isozyme ... [more]
PPE1_SCHPO3.389e-1441.67Serine/threonine-protein phosphatase ppe1 OS=Schiz... [more]
PP4C_DICDI4.426e-1440.48Serine/threonine-protein phosphatase 4 catalytic s... [more]
BSL1_ORYSJ7.550e-1447.95Serine/threonine-protein phosphatase BSL1 homolog ... [more]
PP4C_RABIT9.860e-1438.10Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_PONAB9.860e-1438.10Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_MOUSE9.860e-1438.10Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_HUMAN9.860e-1438.10Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_BOVIN9.860e-1438.10Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4CB_DANRE9.860e-1438.10Serine/threonine-protein phosphatase 4 catalytic s... [more]

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Properties
Property NameValue
Genbank descriptionC05011D02SK AbsAOv1 Citrus clementina cDNA clone C05011D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294121 ID=CX294121; Name=CX294121; organism=Citrus clementina; type=EST; length=521bp
AGGGGAGTTTCATTTACTTTTGGTGCTGACAAAGTGACAGACTTTCTGCA
GAAGCATGATCTGGATCTCGTTTGTCGTGCTCACCAGGTCGTAGAGGATG
GATATGAGTTCTTTGCCAACCGACAGCTTGTTACTATTTTTTCAGCACCT
AATTATTGCGGGGAGTTTGATAATGCTGGTGCAATGATGTCTGTTGATGA
GACACTAATGTGCTCTTTCCAAATATTAAAGCCCTCAGACAAGAAGTCGA
AGTTCGGTTTTGGGAGCACAACTACTGCAAAGCCTTCCAACGGTGGCAAT
GTCTTTGGAAGCACAACTACAGCCAAGCCTGGAAACACACCTGCAGGAGT
CAAGTCTTTCCTTGGTAAGGTATGACAAATTGGTTTGCTGGATAGAGGCC
AACTTCCAGTGGGTTAATGCACATGCGGGGGACTGCAATTAAAGTAATAT
TCTCAGGTCTTTTTGATTTTTCTATAATATTTTGAATTGTATAAAATTGC
GACAGCAAGAGAAAAGAAGTC
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