CX294121

Overview
NameCX294121
Unique NameCX294121
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length521
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP2AB_MOUSE (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Mus musculus GN=Ppp2cb PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.747e-13
Identity = 37/84 (44.05%), Postives = 51/84 (60.71%), Query Frame = 1 
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSK 252
            RG  +TFG D    F   + L LV RAHQ+V +GY +  +R +VTIFSAPNYC    N  A+M +D+TL  SF    P+ ++ +
Sbjct:  214 RGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRRGE 297
[Close]
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP2AB_HUMAN (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Homo sapiens GN=PPP2CB PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.747e-13
Identity = 37/84 (44.05%), Postives = 51/84 (60.71%), Query Frame = 1 
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSK 252
            RG  +TFG D    F   + L LV RAHQ+V +GY +  +R +VTIFSAPNYC    N  A+M +D+TL  SF    P+ ++ +
Sbjct:  214 RGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRRGE 297
[Close]
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP2AB_BOVIN (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Bos taurus GN=PPP2CB PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.747e-13
Identity = 37/84 (44.05%), Postives = 51/84 (60.71%), Query Frame = 1 
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSK 252
            RG  +TFG D    F   + L LV RAHQ+V +GY +  +R +VTIFSAPNYC    N  A+M +D+TL  SF    P+ ++ +
Sbjct:  214 RGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRRGE 297
[Close]
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP2AA_RAT (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Rattus norvegicus GN=Ppp2ca PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.747e-13
Identity = 37/84 (44.05%), Postives = 51/84 (60.71%), Query Frame = 1 
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSK 252
            RG  +TFG D    F   + L LV RAHQ+V +GY +  +R +VTIFSAPNYC    N  A+M +D+TL  SF    P+ ++ +
Sbjct:  214 RGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRRGE 297
[Close]
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP2AA_RABIT (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Oryctolagus cuniculus GN=PPP2CA PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.747e-13
Identity = 37/84 (44.05%), Postives = 51/84 (60.71%), Query Frame = 1 
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSK 252
            RG  +TFG D    F   + L LV RAHQ+V +GY +  +R +VTIFSAPNYC    N  A+M +D+TL  SF    P+ ++ +
Sbjct:  214 RGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRRGE 297
[Close]
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP2AA_PIG (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Sus scrofa GN=PPP2CA PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.747e-13
Identity = 37/84 (44.05%), Postives = 51/84 (60.71%), Query Frame = 1 
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSK 252
            RG  +TFG D    F   + L LV RAHQ+V +GY +  +R +VTIFSAPNYC    N  A+M +D+TL  SF    P+ ++ +
Sbjct:  214 RGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRRGE 297
[Close]
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP2AA_MOUSE (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Mus musculus GN=Ppp2ca PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.747e-13
Identity = 37/84 (44.05%), Postives = 51/84 (60.71%), Query Frame = 1 
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSK 252
            RG  +TFG D    F   + L LV RAHQ+V +GY +  +R +VTIFSAPNYC    N  A+M +D+TL  SF    P+ ++ +
Sbjct:  214 RGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRRGE 297
[Close]
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP2AA_HUMAN (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Homo sapiens GN=PPP2CA PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.747e-13
Identity = 37/84 (44.05%), Postives = 51/84 (60.71%), Query Frame = 1 
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSK 252
            RG  +TFG D    F   + L LV RAHQ+V +GY +  +R +VTIFSAPNYC    N  A+M +D+TL  SF    P+ ++ +
Sbjct:  214 RGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRRGE 297
[Close]
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP2AA_CHICK (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Gallus gallus GN=PPP2CA PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.747e-13
Identity = 37/84 (44.05%), Postives = 51/84 (60.71%), Query Frame = 1 
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSK 252
            RG  +TFG D    F   + L LV RAHQ+V +GY +  +R +VTIFSAPNYC    N  A+M +D+TL  SF    P+ ++ +
Sbjct:  214 RGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRRGE 297
[Close]
BLAST of CX294121 vs. ExPASy Swiss-Prot
Match: PP2AA_BOVIN (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Bos taurus GN=PPP2CA PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.747e-13
Identity = 37/84 (44.05%), Postives = 51/84 (60.71%), Query Frame = 1 
Query:    1 RGVSFTFGADKVTDFLQKHDLDLVCRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPSDKKSK 252
            RG  +TFG D    F   + L LV RAHQ+V +GY +  +R +VTIFSAPNYC    N  A+M +D+TL  SF    P+ ++ +
Sbjct:  214 RGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRRGE 297
The following BLAST results are available for this feature:
BLAST of CX294121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 134
Match NameE-valueIdentityDescription
PP2AB_MOUSE3.747e-1344.05Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AB_HUMAN3.747e-1344.05Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AB_BOVIN3.747e-1344.05Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_RAT3.747e-1344.05Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_RABIT3.747e-1344.05Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_PIG3.747e-1344.05Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_MOUSE3.747e-1344.05Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_HUMAN3.747e-1344.05Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_CHICK3.747e-1344.05Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_BOVIN3.747e-1344.05Serine/threonine-protein phosphatase 2A catalytic ... [more]

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Properties
Property NameValue
Genbank descriptionC05011D02SK AbsAOv1 Citrus clementina cDNA clone C05011D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294121 ID=CX294121; Name=CX294121; organism=Citrus clementina; type=EST; length=521bp
AGGGGAGTTTCATTTACTTTTGGTGCTGACAAAGTGACAGACTTTCTGCA
GAAGCATGATCTGGATCTCGTTTGTCGTGCTCACCAGGTCGTAGAGGATG
GATATGAGTTCTTTGCCAACCGACAGCTTGTTACTATTTTTTCAGCACCT
AATTATTGCGGGGAGTTTGATAATGCTGGTGCAATGATGTCTGTTGATGA
GACACTAATGTGCTCTTTCCAAATATTAAAGCCCTCAGACAAGAAGTCGA
AGTTCGGTTTTGGGAGCACAACTACTGCAAAGCCTTCCAACGGTGGCAAT
GTCTTTGGAAGCACAACTACAGCCAAGCCTGGAAACACACCTGCAGGAGT
CAAGTCTTTCCTTGGTAAGGTATGACAAATTGGTTTGCTGGATAGAGGCC
AACTTCCAGTGGGTTAATGCACATGCGGGGGACTGCAATTAAAGTAATAT
TCTCAGGTCTTTTTGATTTTTCTATAATATTTTGAATTGTATAAAATTGC
GACAGCAAGAGAAAAGAAGTC
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