CX294124
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UBE2S_NEMVE (Ubiquitin-conjugating enzyme E2 S OS=Nematostella vectensis GN=v1g237158 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.983e-15 Identity = 38/106 (35.85%), Postives = 61/106 (57.55%), Query Frame = 1 Query: 94 TIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVR 411 +I G GT +EGG F + L +D+P+ PPK F FHPNV +G +C++ L +D W+P + +KQ+L+ ++ LL PNP E L ++ +Y +R + Sbjct: 49 SIEGPTGTPYEGGIFKIKLVLGKDFPAAPPKGFFLTKIFHPNVAKNGEICVNTLKKD--WKPDLGIKQVLLTVKCLLIVPNPESALNEEAGKLLLERYDDYSKRAK 152
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UBE2S_MOUSE (Ubiquitin-conjugating enzyme E2 S OS=Mus musculus GN=Ube2s PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.983e-15 Identity = 39/106 (36.79%), Postives = 58/106 (54.72%), Query Frame = 1 Query: 94 TIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVR 411 TI G GT + GG F + L +D+P+ PPK F FHPNV P+G +C+++L D W + ++ +L+ I+ LL PNP E L +++ EY R R Sbjct: 46 TIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGPNGEICVNVLKRD--WTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARAR 149
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UBCB_DICDI (Ubiquitin conjugating enzyme E2 B OS=Dictyostelium discoideum GN=ubcB PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.983e-15 Identity = 38/120 (31.67%), Postives = 60/120 (50.00%), Query Frame = 1 Query: 73 NLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPS-GTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 429 NL W T+ G G+ +E G F + + DYP KPP KF +HPN+ S G +C + + W P + + +L I+ +L PNP +P +TE F D + + ++ K+Y Sbjct: 30 NLQKWKATVQGPEGSPFEKGVFSMDIDIPADYPFKPPTLKFTTKIYHPNIKTSDGAICAEVFST---WSPQLKILDVLTTIRSILTDPNPDNPLETEIAQQFKTDRNAFNKTAKEWTKKY 146
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UB2SA_XENLA (Ubiquitin-conjugating enzyme E2 S-A OS=Xenopus laevis GN=ube2s-A PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.983e-15 Identity = 39/106 (36.79%), Postives = 58/106 (54.72%), Query Frame = 1 Query: 94 TIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVR 411 TI G GT + GG F + L +D+P+ PPK F FHPNV P+G +C+++L D W + ++ +L+ I+ LL PNP E L +++ EY R R Sbjct: 46 TIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGPNGEICVNVLKRD--WTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARAR 149
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UBC1_YEAST (Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae GN=UBC1 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.508e-15 Identity = 40/113 (35.40%), Postives = 58/113 (51.33%), Query Frame = 1 Query: 94 TIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYP-SGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 429 T G GT +EGG F + + +YP KPPK +F +HPN+ +G +CL IL N W P IT+K L+ +Q LL P P DP E +++D + + + Y Sbjct: 38 TFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGAICLDILK--NAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLY 148
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UBE2N_RAT (Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus GN=Ube2n PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 8.500e-15 Identity = 41/97 (42.27%), Postives = 54/97 (55.67%), Query Frame = 1 Query: 58 PDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADP 348 PD S N +H I G + +EGG F L L E+YP PK +F +HPNV G +CL IL + W PA+ ++ +L+ IQ LL PNP DP Sbjct: 27 PDES-NARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDK--WSPALQIRTVLLSIQALLSAPNPDDP 120
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UBE2N_PONAB (Ubiquitin-conjugating enzyme E2 N OS=Pongo abelii GN=UBE2N PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 8.500e-15 Identity = 41/97 (42.27%), Postives = 54/97 (55.67%), Query Frame = 1 Query: 58 PDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADP 348 PD S N +H I G + +EGG F L L E+YP PK +F +HPNV G +CL IL + W PA+ ++ +L+ IQ LL PNP DP Sbjct: 27 PDES-NARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDK--WSPALQIRTVLLSIQALLSAPNPDDP 120
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UBE2N_MOUSE (Ubiquitin-conjugating enzyme E2 N OS=Mus musculus GN=Ube2n PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 8.500e-15 Identity = 41/97 (42.27%), Postives = 54/97 (55.67%), Query Frame = 1 Query: 58 PDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADP 348 PD S N +H I G + +EGG F L L E+YP PK +F +HPNV G +CL IL + W PA+ ++ +L+ IQ LL PNP DP Sbjct: 27 PDES-NARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDK--WSPALQIRTVLLSIQALLSAPNPDDP 120
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UBE2N_HUMAN (Ubiquitin-conjugating enzyme E2 N OS=Homo sapiens GN=UBE2N PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 8.500e-15 Identity = 41/97 (42.27%), Postives = 54/97 (55.67%), Query Frame = 1 Query: 58 PDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADP 348 PD S N +H I G + +EGG F L L E+YP PK +F +HPNV G +CL IL + W PA+ ++ +L+ IQ LL PNP DP Sbjct: 27 PDES-NARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDK--WSPALQIRTVLLSIQALLSAPNPDDP 120
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UBE2N_BOVIN (Ubiquitin-conjugating enzyme E2 N OS=Bos taurus GN=UBE2N PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 8.500e-15 Identity = 41/97 (42.27%), Postives = 54/97 (55.67%), Query Frame = 1 Query: 58 PDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADP 348 PD S N +H I G + +EGG F L L E+YP PK +F +HPNV G +CL IL + W PA+ ++ +L+ IQ LL PNP DP Sbjct: 27 PDES-NARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDK--WSPALQIRTVLLSIQALLSAPNPDDP 120 The following BLAST results are available for this feature:
BLAST of CX294124 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 214
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294124 ID=CX294124; Name=CX294124; organism=Citrus clementina; type=EST; length=570bpback to top |