CX294124
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UBC36_ARATH (Ubiquitin carrier protein E2 36 OS=Arabidopsis thaliana GN=UBC36 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.227e-13 Identity = 36/92 (39.13%), Postives = 52/92 (56.52%), Query Frame = 1 Query: 73 NLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADP 348 N+ ++ I G + +EGG F L L E+YP PK +F +HPN+ G +CL IL + W PA+ ++ +L+ IQ LL PNP DP Sbjct: 33 NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDK--WSPALQIRTVLLSIQALLSAPNPDDP 122
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UBC35_ARATH (Ubiquitin carrier protein E2 35 OS=Arabidopsis thaliana GN=UBC35 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.227e-13 Identity = 36/92 (39.13%), Postives = 52/92 (56.52%), Query Frame = 1 Query: 73 NLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADP 348 N+ ++ I G + +EGG F L L E+YP PK +F +HPN+ G +CL IL + W PA+ ++ +L+ IQ LL PNP DP Sbjct: 33 NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDK--WSPALQIRTVLLSIQALLSAPNPDDP 122
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UBE2S_DANRE (Ubiquitin-conjugating enzyme E2 S OS=Danio rerio GN=ube2s PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.603e-13 Identity = 37/106 (34.91%), Postives = 57/106 (53.77%), Query Frame = 1 Query: 88 HCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRR 405 H +I G GT + GG F + L +D+P+ PP+ F FHPNV G +C+++L D W+ + ++ +L+ I+ LL PNP E L ++D EY R Sbjct: 44 HTSIEGPEGTPYAGGVFRMRLVLGKDFPAVPPRGYFLTKIFHPNVGHKGEICVNVLKRD--WKAELGLRHVLLTIKCLLIHPNPESALNEEAGKLLLEDYKEYASR 147
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UBC12_CANGA (NEDD8-conjugating enzyme UBC12 OS=Candida glabrata GN=UBC12 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.603e-13 Identity = 38/97 (39.18%), Postives = 53/97 (54.64%), Query Frame = 1 Query: 121 WEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVR 411 ++GG F T F E YP PPK FHPN+ P G +CL+IL ED W PA+ ++ I++G+ L +PN DP E + +D E+ VR Sbjct: 76 YKGGKFRFTATFLETYPIDPPKVICNNKIFHPNIDPHGKICLNILRED--WSPALDLQCIVLGLLSLFQEPNGNDPLNKEAAEVLNKDKLEFGNLVR 170
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UB2R2_RABIT (Ubiquitin-conjugating enzyme E2 R2 OS=Oryctolagus cuniculus GN=UBE2R2 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.734e-13 Identity = 42/119 (35.29%), Postives = 59/119 (49.58%), Query Frame = 1 Query: 52 TLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILN-----------EDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLF 375 TL D S +L W I G T +EGG+F + F DYP PP +F +HPN+Y +G VC+SIL+ W P V+ IL+ + LL++PN PA + +F Sbjct: 31 TLVDES-DLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMF 148
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UB2R2_MOUSE (Ubiquitin-conjugating enzyme E2 R2 OS=Mus musculus GN=Ube2r2 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.734e-13 Identity = 42/119 (35.29%), Postives = 59/119 (49.58%), Query Frame = 1 Query: 52 TLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILN-----------EDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLF 375 TL D S +L W I G T +EGG+F + F DYP PP +F +HPN+Y +G VC+SIL+ W P V+ IL+ + LL++PN PA + +F Sbjct: 31 TLVDES-DLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMF 148
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UB2R2_HUMAN (Ubiquitin-conjugating enzyme E2 R2 OS=Homo sapiens GN=UBE2R2 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.734e-13 Identity = 42/119 (35.29%), Postives = 59/119 (49.58%), Query Frame = 1 Query: 52 TLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILN-----------EDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLF 375 TL D S +L W I G T +EGG+F + F DYP PP +F +HPN+Y +G VC+SIL+ W P V+ IL+ + LL++PN PA + +F Sbjct: 31 TLVDES-DLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMF 148
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UBE2T_HUMAN (Ubiquitin-conjugating enzyme E2 T OS=Homo sapiens GN=UBE2T PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.664e-13 Identity = 36/113 (31.86%), Postives = 59/113 (52.21%), Query Frame = 1 Query: 97 IPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILN--EDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 429 I G A T +E G F L + E YP +PP+ +F +HPN+ +G +CL +L WRP++ + +L IQ L+ +PNP DP + F + + + RQ +++ Sbjct: 38 ILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEKH 150
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UB2R1_MOUSE (Ubiquitin-conjugating enzyme E2 R1 OS=Mus musculus GN=Cdc34 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.664e-13 Identity = 38/107 (35.51%), Postives = 53/107 (49.53%), Query Frame = 1 Query: 73 NLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILN-----------EDNGWRPAITVKQILVGIQDLLDQPNPADPAQTE 360 +L W I G T +EGG+F L F DYP PP +F +HPN+Y +G VC+SIL+ W P V+ IL+ + LL++PN PA + Sbjct: 37 DLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVD 143
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UB2R1_HUMAN (Ubiquitin-conjugating enzyme E2 R1 OS=Homo sapiens GN=CDC34 PE=1 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 4.664e-13 Identity = 38/107 (35.51%), Postives = 53/107 (49.53%), Query Frame = 1 Query: 73 NLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILN-----------EDNGWRPAITVKQILVGIQDLLDQPNPADPAQTE 360 +L W I G T +EGG+F L F DYP PP +F +HPN+Y +G VC+SIL+ W P V+ IL+ + LL++PN PA + Sbjct: 37 DLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVD 143 The following BLAST results are available for this feature:
BLAST of CX294124 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 214
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294124 ID=CX294124; Name=CX294124; organism=Citrus clementina; type=EST; length=570bpback to top |