CX294124
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UBE2S_DICDI (Ubiquitin-conjugating enzyme E2 S OS=Dictyostelium discoideum GN=ube2s PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.357e-12 Identity = 36/105 (34.29%), Postives = 55/105 (52.38%), Query Frame = 1 Query: 97 IPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVR 411 + G AGT +EGG+F L S D+P PPK F FHPNV G +C++ L +D W + +K IL+ I+ LL PN + L +++ +Y + + Sbjct: 45 VTGPAGTPYEGGYFKARLILSSDFPRSPPKANFITKIFHPNVSKKGEICVNTLKKD--WTEDLGLKHILLTIKCLLIVPNAESSLNEDASRLLLENYDDYCKHAK 147
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UBE2C_MOUSE (Ubiquitin-conjugating enzyme E2 C OS=Mus musculus GN=Ube2c PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.357e-12 Identity = 49/132 (37.12%), Postives = 60/132 (45.45%), Query Frame = 1 Query: 31 GFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQ 426 G A PE S NL W TI G AGT +E + L+L F YP P KF +HPNV G +CL IL + W V+ IL+ IQ LL +PN P T L+ A K +KQ Sbjct: 49 GISAFPE-----SDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDK--WSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTAFKKYLQETYSKQ 173
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UBE2C_MACFA (Ubiquitin-conjugating enzyme E2 C OS=Macaca fascicularis GN=UBE2C PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.357e-12 Identity = 49/132 (37.12%), Postives = 60/132 (45.45%), Query Frame = 1 Query: 31 GFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQ 426 G A PE S NL W TI G AGT +E + L+L F YP P KF +HPNV G +CL IL + W V+ IL+ IQ LL +PN P T L+ A K +KQ Sbjct: 49 GISAFPE-----SDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDK--WSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTAFKKYLQETYSKQ 173
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UBE2C_BOVIN (Ubiquitin-conjugating enzyme E2 C OS=Bos taurus GN=UBE2C PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.357e-12 Identity = 49/132 (37.12%), Postives = 60/132 (45.45%), Query Frame = 1 Query: 31 GFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQ 426 G A PE S NL W TI G AGT +E + L+L F YP P KF +HPNV G +CL IL + W V+ IL+ IQ LL +PN P T L+ A K +KQ Sbjct: 49 GISAFPE-----SDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDK--WSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTAFKKYLQETYSKQ 173
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UBC12_MOUSE (NEDD8-conjugating enzyme Ubc12 OS=Mus musculus GN=Ube2m PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.357e-12 Identity = 38/122 (31.15%), Postives = 61/122 (50.00%), Query Frame = 1 Query: 58 PDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAK 423 PD +N + C G ++ G F + + YP PPK K +HPN+ G VCL+IL ED W+P +T+ I+ G+Q L +PNP DP E + + +++ V++ + Sbjct: 54 PDDLLNFKLVICPDEGF----YKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILRED--WKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMR 169
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UBC12_HUMAN (NEDD8-conjugating enzyme Ubc12 OS=Homo sapiens GN=UBE2M PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.357e-12 Identity = 38/122 (31.15%), Postives = 61/122 (50.00%), Query Frame = 1 Query: 58 PDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAK 423 PD +N + C G ++ G F + + YP PPK K +HPN+ G VCL+IL ED W+P +T+ I+ G+Q L +PNP DP E + + +++ V++ + Sbjct: 54 PDDLLNFKLVICPDEGF----YKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILRED--WKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMR 169
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UBC12_BOVIN (NEDD8-conjugating enzyme Ubc12 OS=Bos taurus GN=UBE2M PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.357e-12 Identity = 38/122 (31.15%), Postives = 61/122 (50.00%), Query Frame = 1 Query: 58 PDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAK 423 PD +N + C G ++ G F + + YP PPK K +HPN+ G VCL+IL ED W+P +T+ I+ G+Q L +PNP DP E + + +++ V++ + Sbjct: 54 PDDLLNFKLVICPDEGF----YKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILRED--WKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMR 169
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UBC21_ARATH (Probable ubiquitin carrier protein E2 21 OS=Arabidopsis thaliana GN=UBC21 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.023e-12 Identity = 37/101 (36.63%), Postives = 52/101 (51.49%), Query Frame = 1 Query: 73 NLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNV-YPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHL 372 N+ W I G + T +EGG F L E YP +PP+ +F FHPNV + +G +CL IL N W PA T++ + I L+ P P P + +L Sbjct: 33 NIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILK--NAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNL 131
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UB2L6_RAT (Ubiquitin/ISG15-conjugating enzyme E2 L6 OS=Rattus norvegicus GN=Ube2l6 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.023e-12 Identity = 37/126 (29.37%), Postives = 63/126 (50.00%), Query Frame = 1 Query: 55 LPDGSVNLMVWHCTI-PGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 429 L N++VWH + P + + F L + F +YP KPP +F +HPN+ G VCL +++ +N W+P Q+L + L+ +PN +P + E L QD ++++ + QY Sbjct: 25 LSSDDANVLVWHMLLLPDQLPYRLKA--FGLRIDFPREYPLKPPTLRFTTKIYHPNISEDGLVCLPLISTEN-WKPYTKAYQVLEALNILVSRPNLEEPVRLELADLLTQDPEMFRKKAEEFTLQY 147
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UBC12_YEAST (NEDD8-conjugating enzyme UBC12 OS=Saccharomyces cerevisiae GN=UBC12 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.735e-12 Identity = 36/94 (38.30%), Postives = 50/94 (53.19%), Query Frame = 1 Query: 130 GFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVR 411 G L F+E YP +PPK + FHPN+ G VCL+IL ED W PA+ ++ I+ G+ L +PNP DP + L + E+ VR Sbjct: 78 GSINFNLDFNEVYPIEPPKVVCLKKIFHPNIDLKGNVCLNILRED--WSPALDLQSIITGLLFLFLEPNPNDPLNKDAAKLLCEGEKEFAEAVR 169 The following BLAST results are available for this feature:
BLAST of CX294124 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 214
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294124 ID=CX294124; Name=CX294124; organism=Citrus clementina; type=EST; length=570bpback to top |