CX294124
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UBC4_WHEAT (Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum GN=UBC4 PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 9.726e-11 Identity = 36/111 (32.43%), Postives = 59/111 (53.15%), Query Frame = 1 Query: 103 GKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNV-YPSGTVCLSILNEDNGWRPAITVKQIL-VGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 429 G + ++GG + + + +E YP K P F +HPNV SG+VCL ++N+ W P + I V + LL PNP+DP E L ++D Y+ +V++ ++Y Sbjct: 38 GPKDSIYQGGVWKVRVELTEAYPYKSPSIGFTNKIYHPNVDEMSGSVCLDVINQT--WSPMFDLVNIFEVFLPQLLLYPNPSDPLNGEAASLMMRDKNAYENKVKEYCERY 146
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UBC12_ASHGO (NEDD8-conjugating enzyme UBC12 OS=Ashbya gossypii GN=UBC12 PE=3 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 9.726e-11 Identity = 29/97 (29.90%), Postives = 54/97 (55.67%), Query Frame = 1 Query: 121 WEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVR 411 + GG F ++ F + YP +PP K +HPN+ SG +CL++L ED W P + ++ +++G+ L +PN +DP + ++D ++ V+ Sbjct: 72 YRGGHFRFSVVFRDTYPIEPPTVKCLNTIYHPNIDYSGNICLNVLRED--WSPVMDLQTVVLGLLFLFLEPNGSDPLNRQAADTMLRDPYRFETNVQ 166
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UB2L6_MOUSE (Ubiquitin/ISG15-conjugating enzyme E2 L6 OS=Mus musculus GN=Ube2l6 PE=2 SV=3) HSP 1 Score: 66.6254 bits (161), Expect = 9.726e-11 Identity = 34/121 (28.10%), Postives = 61/121 (50.41%), Query Frame = 1 Query: 55 LPDGSVNLMVWHCTI-PGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQ 414 L N++VWH + P + + F + + F +YP KPP +F +HPNV G VCL +++ +N W+P Q+L + L+ +PN +P + E L Q+ ++++ + Sbjct: 25 LSSDDANVLVWHMLLLPDQLPYGLKA--FQVRIDFPREYPFKPPTLRFTTKIYHPNVREDGLVCLPLISNEN-WKPYTKPYQVLEALNVLVSKPNLEEPVRLELADLLTQNPEMFRKKAEE 142
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UB2L6_BOVIN (Ubiquitin/ISG15-conjugating enzyme E2 L6 OS=Bos taurus GN=UBE2L6 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 9.726e-11 Identity = 36/120 (30.00%), Postives = 61/120 (50.83%), Query Frame = 1 Query: 73 NLMVWHCTI-PGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 429 N++VWH + P + + + F L + F +YP +PP KF +HPNV G VCL I+++ N W+ + Q+L + L++QP P P + E QD + + ++ Q+ Sbjct: 31 NVLVWHALLLPERPPYNLKA--FRLCISFPREYPFQPPTVKFTTRIYHPNVDRDGRVCLPIISKKN-WKASTRTCQVLEALNMLVNQPEPGQPVRLELAEQLTQDPELFDQMAQEFTLQF 147 The following BLAST results are available for this feature:
BLAST of CX294124 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 214
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294124 ID=CX294124; Name=CX294124; organism=Citrus clementina; type=EST; length=570bpback to top |