CX294124
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UBCD1_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=eff PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.354e-20 Identity = 46/119 (38.66%), Postives = 67/119 (56.30%), Query Frame = 1 Query: 73 NLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 429 +L W TI G + ++GG F LT+HF DYP KPPK F +HPN+ +G++CL IL W PA+T+ ++L+ I LL PNP DP E ++ D +Y R+ ++Y Sbjct: 29 DLFHWQATIMGPPDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKY 145
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UB2D2_XENLA (Ubiquitin-conjugating enzyme E2 D2 OS=Xenopus laevis GN=ube2d2 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.354e-20 Identity = 46/115 (40.00%), Postives = 66/115 (57.39%), Query Frame = 1 Query: 85 WHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 429 W TI G + ++GG F LT+HF DYP KPPK F +HPN+ +G++CL IL W PA+T+ ++L+ I LL PNP DP E ++ D +Y R R+ ++Y Sbjct: 33 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKY 145
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UB2D2_RAT (Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norvegicus GN=Ube2d2 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.354e-20 Identity = 46/115 (40.00%), Postives = 66/115 (57.39%), Query Frame = 1 Query: 85 WHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 429 W TI G + ++GG F LT+HF DYP KPPK F +HPN+ +G++CL IL W PA+T+ ++L+ I LL PNP DP E ++ D +Y R R+ ++Y Sbjct: 33 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKY 145
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UB2D2_MOUSE (Ubiquitin-conjugating enzyme E2 D2 OS=Mus musculus GN=Ube2d2 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.354e-20 Identity = 46/115 (40.00%), Postives = 66/115 (57.39%), Query Frame = 1 Query: 85 WHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 429 W TI G + ++GG F LT+HF DYP KPPK F +HPN+ +G++CL IL W PA+T+ ++L+ I LL PNP DP E ++ D +Y R R+ ++Y Sbjct: 33 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKY 145
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UB2D2_HUMAN (Ubiquitin-conjugating enzyme E2 D2 OS=Homo sapiens GN=UBE2D2 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.354e-20 Identity = 46/115 (40.00%), Postives = 66/115 (57.39%), Query Frame = 1 Query: 85 WHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 429 W TI G + ++GG F LT+HF DYP KPPK F +HPN+ +G++CL IL W PA+T+ ++L+ I LL PNP DP E ++ D +Y R R+ ++Y Sbjct: 33 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKY 145
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UB2D2_BOVIN (Ubiquitin-conjugating enzyme E2 D2 OS=Bos taurus GN=UBE2D2 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.354e-20 Identity = 46/115 (40.00%), Postives = 66/115 (57.39%), Query Frame = 1 Query: 85 WHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 429 W TI G + ++GG F LT+HF DYP KPPK F +HPN+ +G++CL IL W PA+T+ ++L+ I LL PNP DP E ++ D +Y R R+ ++Y Sbjct: 33 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKY 145
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UBC4_YEAST (Ubiquitin-conjugating enzyme E2 4 OS=Saccharomyces cerevisiae GN=UBC4 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.768e-20 Identity = 46/119 (38.66%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 73 NLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 429 +L W +I G A + + GG F L++HF DYP KPPK F +HPN+ +G +CL IL + W PA+T+ ++L+ I LL NP DP E H++ D +Y+ R+ K+Y Sbjct: 30 DLYHWQASIMGPADSPYAGGVFFLSIHFPTDYPFKPPKISFTTKIYHPNINANGNICLDILKDQ--WSPALTLSKVLLSICSLLTDANPDDPLVPEIAHIYKTDRPKYEATAREWTKKY 146
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UBC2_CAEEL (Ubiquitin-conjugating enzyme E2 2 OS=Caenorhabditis elegans GN=let-70 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.309e-20 Identity = 46/119 (38.66%), Postives = 67/119 (56.30%), Query Frame = 1 Query: 73 NLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 429 +L W TI G + ++GG F LT+HF DYP KPPK F +HPN+ +G++CL IL W PA+T+ ++L+ I LL PNP DP E ++ D Y + R+ ++Y Sbjct: 29 DLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQKY 145
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UBC29_ARATH (Ubiquitin carrier protein E2 29 OS=Arabidopsis thaliana GN=UBC29 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.016e-20 Identity = 45/115 (39.13%), Postives = 64/115 (55.65%), Query Frame = 1 Query: 85 WHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 429 W TI G + + GG F + +HF DYP KPPK F FHPN+ +G +CL IL + W PA+T+ ++L+ I LL PNP DP E H++ D +Y+ R ++Y Sbjct: 33 WQATIMGPNESPYSGGVFLVNIHFPPDYPFKPPKVVFRTKVFHPNINSNGNICLDILKDQ--WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHIYKTDKTKYEAMARSWTQKY 145
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UB2D3_RAT (Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus GN=Ube2d3 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.016e-20 Identity = 46/115 (40.00%), Postives = 66/115 (57.39%), Query Frame = 1 Query: 85 WHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 429 W TI G + ++GG F LT+HF DYP KPPK F +HPN+ +G++CL IL W PA+T+ ++L+ I LL PNP DP E ++ D +Y R R+ ++Y Sbjct: 33 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKY 145 The following BLAST results are available for this feature:
BLAST of CX294124 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 214
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294124 ID=CX294124; Name=CX294124; organism=Citrus clementina; type=EST; length=570bpback to top |