CX294259

Overview
NameCX294259
Unique NameCX294259
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length585
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294259 vs. ExPASy Swiss-Prot
Match: 14336_ORYSJ (14-3-3-like protein GF14-F OS=Oryza sativa subsp. japonica GN=GF14F PE=1 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 1.079e-36
Identity = 75/105 (71.43%), Postives = 88/105 (83.81%), Query Frame = 1
Query:   37 DRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAEFDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSK 351
            +RKEAA+++L           ++LP THPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFD+AIAE D+L EESYKDSTLIMQLLRDNLTLWTSD  E+GG++ K
Sbjct:  146 ERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDNAEDGGDEIK 250          
BLAST of CX294259 vs. ExPASy Swiss-Prot
Match: 14331_ARATH (14-3-3-like protein GF14 chi OS=Arabidopsis thaliana GN=GRF1 PE=1 SV=3)

HSP 1 Score: 152.91 bits (385), Expect = 1.079e-36
Identity = 75/109 (68.81%), Postives = 87/109 (79.82%), Query Frame = 1
Query:   25 QGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAEFDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSK 351
            +   +RK+AA+H+L           SEL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIAE D+L EESYKDSTLIMQLLRDNLTLWTSD+ ++  +  K
Sbjct:  144 KSGQERKDAAEHTLTAYKAAQDIANSELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDVADDIK 252          
BLAST of CX294259 vs. ExPASy Swiss-Prot
Match: BMH1_YEAST (Protein BMH1 OS=Saccharomyces cerevisiae GN=BMH1 PE=1 SV=4)

HSP 1 Score: 152.525 bits (384), Expect = 1.409e-36
Identity = 78/125 (62.40%), Postives = 93/125 (74.40%), Query Frame = 1
Query:   34 DDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAEFDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGDEVQAES*PGMHEHQEEK 408
            D R++A + SL+          +ELPPTHPIRLGLALNFSVFYYEI NSP++ACHLAKQAFD+AIAE D+L+EESYKDSTLIMQLLRDNLTLWTSD+ E G         QAE      +HQ+++
Sbjct:  141 DAREKATNASLEAYKTASEIATTELPPTHPIRLGLALNFSVFYYEIQNSPDKACHLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMSESG---------QAEDQQQQQQHQQQQ 256          
BLAST of CX294259 vs. ExPASy Swiss-Prot
Match: 14332_SOLTU (14-3-3-like protein RA215 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.409e-36
Identity = 74/105 (70.48%), Postives = 87/105 (82.86%), Query Frame = 1
Query:   37 DRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAEFDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSK 351
            +RKEAA+++L            EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIA+ D+L EESYKDSTLIMQLLRDNLTLWTSD+ ++G ++ K
Sbjct:  142 ERKEAAENTLSAYKSAQDIANGELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIADVDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIK 246          
BLAST of CX294259 vs. ExPASy Swiss-Prot
Match: 14333_ARATH (14-3-3-like protein GF14 psi OS=Arabidopsis thaliana GN=GRF3 PE=1 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 1.840e-36
Identity = 75/105 (71.43%), Postives = 86/105 (81.90%), Query Frame = 1
Query:   37 DRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAEFDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSK 351
            +RKEAA+ +L           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC LAKQAFD+AIAE D+L EESYKDSTLIMQLLRDNLTLWTSD+ +E G++ K
Sbjct:  142 ERKEAAESTLVAYKSASDIATAELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMTDEAGDEIK 246          
BLAST of CX294259 vs. ExPASy Swiss-Prot
Match: 14332_ORYSJ (14-3-3-like protein GF14-B OS=Oryza sativa subsp. japonica GN=GF14B PE=1 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 1.840e-36
Identity = 73/103 (70.87%), Postives = 88/103 (85.44%), Query Frame = 1
Query:   37 DRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAEFDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQ 345
            +RK+AA++++           +ELPPTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAI+E D+L+EESYKDSTLIMQLLRDNLTLWTSD+ E+  E+
Sbjct:  147 ERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDISEDTAEE 249          
BLAST of CX294259 vs. ExPASy Swiss-Prot
Match: 14331_ORYSJ (14-3-3-like protein GF14-A OS=Oryza sativa subsp. japonica GN=GF14A PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.840e-36
Identity = 74/105 (70.48%), Postives = 86/105 (81.90%), Query Frame = 1
Query:   37 DRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAEFDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSK 351
            +RK+AAD +L            EL PTHPIRLGLALNFSVFYYEILNSP+RAC LAKQAFDEAI+E D+L EESYKDSTLIMQLLRDNLTLWTSD+ ++GG++ +
Sbjct:  151 ERKDAADATLAAYQAAQDIAMKELSPTHPIRLGLALNFSVFYYEILNSPDRACTLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGGDEMR 255          
BLAST of CX294259 vs. ExPASy Swiss-Prot
Match: 1433E_DROME (14-3-3 protein epsilon OS=Drosophila melanogaster GN=14-3-3epsilon PE=1 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 3.139e-36
Identity = 75/107 (70.09%), Postives = 87/107 (81.31%), Query Frame = 1
Query:   37 DRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAEFDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGD 357
            DRK+AA++SL           ++LPPTHPIRLGLALNFSVFYYEILNSP+RAC LAK AFD+AIAE D+L+EESYKDSTLIMQLLRDNLTLWTSD+  E  + + GD
Sbjct:  140 DRKDAAENSLIAYKAASDIAMNDLPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQAEEVDPNAGD 246          
BLAST of CX294259 vs. ExPASy Swiss-Prot
Match: 14337_ARATH (14-3-3-like protein GF14 nu OS=Arabidopsis thaliana GN=GRF7 PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 3.139e-36
Identity = 80/124 (64.52%), Postives = 93/124 (75.00%), Query Frame = 1
Query:   37 DRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAEFDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGDEVQAES*PGMHEHQEEK 408
            +RKEAA+ +L           ++L PTHPIRLGLALNFSVFYYEILNSP+RAC LAKQAFDEAI+E D+L EESYKDSTLIMQLLRDNLTLW SD+ +E G    GDE++  S    HE +E K
Sbjct:  143 ERKEAAESTLVAYKSAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWNSDINDEAG----GDEIKEAS---KHEPEEGK 259          
BLAST of CX294259 vs. ExPASy Swiss-Prot
Match: 1433_HELAN (14-3-3-like protein OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 5.355e-36
Identity = 74/106 (69.81%), Postives = 87/106 (82.08%), Query Frame = 1
Query:   34 DDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAEFDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSK 351
            D+RK AA+++L           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIAE D+L E+SYKDSTLIMQLLRDNLTLWTSD+ ++  E+ K
Sbjct:  146 DERKLAAENTLSAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEDSYKDSTLIMQLLRDNLTLWTSDMQDDTAEEVK 251          
The following BLAST results are available for this feature:
BLAST of CX294259 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
14336_ORYSJ1.079e-3671.4314-3-3-like protein GF14-F OS=Oryza sativa subsp. ... [more]
14331_ARATH1.079e-3668.8114-3-3-like protein GF14 chi OS=Arabidopsis thalia... [more]
BMH1_YEAST1.409e-3662.40Protein BMH1 OS=Saccharomyces cerevisiae GN=BMH1 P... [more]
14332_SOLTU1.409e-3670.4814-3-3-like protein RA215 OS=Solanum tuberosum PE=... [more]
14333_ARATH1.840e-3671.4314-3-3-like protein GF14 psi OS=Arabidopsis thalia... [more]
14332_ORYSJ1.840e-3670.8714-3-3-like protein GF14-B OS=Oryza sativa subsp. ... [more]
14331_ORYSJ1.840e-3670.4814-3-3-like protein GF14-A OS=Oryza sativa subsp. ... [more]
1433E_DROME3.139e-3670.0914-3-3 protein epsilon OS=Drosophila melanogaster ... [more]
14337_ARATH3.139e-3664.5214-3-3-like protein GF14 nu OS=Arabidopsis thalian... [more]
1433_HELAN5.355e-3669.8114-3-3-like protein OS=Helianthus annuus PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC05014C08SK AbsAOv1 Citrus clementina cDNA clone C05014C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294259 ID=CX294259; Name=CX294259; organism=Citrus clementina; type=EST; length=585bp
TCGGCCACTACGGCCGGCTGAGTTCAAGGTGCTGATGATCGTAAGGAAGC
TGCAGATCATTCACTTAAGGCTTACGAGGCTGCTACAGCTGCAGCAGCCT
CAGAGTTACCCCCAACTCATCCAATCAGACTTGGCCTGGCTCTTAACTTT
TCTGTTTTCTACTATGAGATTTTGAACTCACCTGAGAGGGCTTGCCACCT
GGCTAAACAAGCATTTGATGAGGCGATTGCTGAATTTGATAGCCTTAATG
AAGAGTCCTACAAGGACAGCACCCTTATTATGCAGCTTCTTCGGGATAAT
CTCACCTTGTGGACCTCGGATCTACCGGAGGAGGGAGGTGAGCAATCTAA
AGGTGATGAAGTTCAAGCAGAGAGCTAGCCGGGGATGCATGAGCATCAGG
AGGAGAAATTGTGCTAGTTGGGTTCTAATATCTATTAGTATTAGTAGTAT
AGGGATTGAAAGAACATTTGGCTTGTATAATACTTATTACATGTTTTTAA
TTTCAGGTTGTTGTGCTATTTTCTGTTTCATATAAATTGAGTTTGCTACT
TCTCGAGAAGGACTTGCTATGCTATTTAGTGCTAG
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