CX294355

Overview
NameCX294355
Unique NameCX294355
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length546
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294355 vs. ExPASy Swiss-Prot
Match: HFA2A_ORYSJ (Heat stress transcription factor A-2a OS=Oryza sativa subsp. japonica GN=HSFA2A PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.202e-20
Identity = 58/156 (37.18%), Postives = 80/156 (51.28%), Query Frame = 2
Query:   11 SFVRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHS-------------HSTQSPTPLTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGFSSAL-NQQAEVHSKKRRLL 436
            SFVRQLNTYGFRK+DPD+WEFANE F+RG++ LLK I RR+P  S             H  Q      E  +   +  + RL+++ S                   +Q++ ER+   E +Q QM   LA  +K PGF   L ++QA  H  + R+L
Sbjct:  104 SFVRQLNTYGFRKVDPDRWEFANEGFLRGKKELLKTIKRRRPPPSSPPSSSSSSSSSQHQQQPAAACLEVGQFGRDGVVNRLQRDKSVLIAEVVKLRQEQQTTRAQMQAMEERISAAEQKQQQMTVFLARAMKNPGFLQMLVDRQAGQHGARNRVL 259          
BLAST of CX294355 vs. ExPASy Swiss-Prot
Match: HFA6B_ARATH (Heat stress transcription factor A-6b OS=Arabidopsis thaliana GN=HSFA6b PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.566e-20
Identity = 53/144 (36.81%), Postives = 81/144 (56.25%), Query Frame = 2
Query:   11 SFVRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHSTQSPTPLT-----------ETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGFSSALNQQAE 409
            SFVRQLNTYGFRK++PD+WEFANE F+RGQ+HLLKNI RRK   ++S Q   P +           E  R   + +++ L+++                  + ++  + E+L+  E++Q QM++ LA  ++ P F   L +Q E
Sbjct:  112 SFVRQLNTYGFRKVNPDRWEFANEGFLRGQKHLLKNIRRRK-TSNNSNQMQQPQSSEQQSLDNFCIEVGRYGLDGEMDSLRRDKQVLMMELVRLRQQQQSTKMYLTLIEEKLKKTESKQKQMMSFLARAMQNPDFIQQLVEQKE 254          
BLAST of CX294355 vs. ExPASy Swiss-Prot
Match: HSFA9_ORYSJ (Heat stress transcription factor A-9 OS=Oryza sativa subsp. japonica GN=HSFA9 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 7.789e-20
Identity = 60/154 (38.96%), Postives = 85/154 (55.19%), Query Frame = 2
Query:   11 SFVRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHSTQSPTPLTE--------TERNE------FEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGFSSALNQQAEVHSKKRR 430
            SF+RQLNTYGFRK+ PD+WE+ANE FI GQ+HLLK I RRK     S +SP+ + +        TE  E       E ++E LK++ +                   VQ++ ERL+ +E  Q QM+A LA +++ P F   LNQ  +   ++RR
Sbjct:  100 SFIRQLNTYGFRKVHPDRWEWANEGFIMGQKHLLKTIKRRK---KSSQESPSEIQKAPVKTAPGTENIEIGKYGGLEKEVETLKRDKALLMQQLVDLRHYQQTSNLEVQNLIERLQVMEQNQQQMMALLAIVVQNPSF---LNQLVQQQQQQRR 247          
BLAST of CX294355 vs. ExPASy Swiss-Prot
Match: HSF30_SOLPE (Heat shock factor protein HSF30 OS=Solanum peruvianum GN=HSF30 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.735e-19
Identity = 60/174 (34.48%), Postives = 88/174 (50.57%), Query Frame = 2
Query:   11 SFVRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPV-HSHSTQSPTPLTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGFSSALNQQAEVHSK---------KRRLLRPTTIEYFDDVKSASLSVNEQK 502
            SF+RQLNTYGFRK+DPD+WEFANE F+ GQ+HLLK I RR+ V  S + Q      E      E ++ERLK++ +                   + ++ E++   E +Q QM++ LA +   P F      + +VH K         KRRL    ++   D   + S S+ E +
Sbjct:   82 SFIRQLNTYGFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRNVGQSMNQQGSGACIEIGYYGMEEELERLKRDKNVLMTEIVKLRQQQQSTRNQIIAMGEKIETQERKQVQMMSFLAKIFSNPTFLQQYLDK-QVHRKDKQRIEVGQKRRLTMTPSVTGSDQPMNYSSSLQESE 254          
BLAST of CX294355 vs. ExPASy Swiss-Prot
Match: HSFA3_ORYSJ (Heat stress transcription factor A-3 OS=Oryza sativa subsp. japonica GN=HSFA3 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.125e-18
Identity = 63/181 (34.81%), Postives = 94/181 (51.93%), Query Frame = 2
Query:   11 SFVRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHSTQSPTPLTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGFSSAL---NQQAEVHSK--KRRLLRPTTIEYFDDVKSASLSVNEQKENPDATSDPSPA 538
            SFVRQLNTYGFRK+  D+WEFA+E+F+R  +HLLK I RR+   S + QS      +  +  + ++  L++E S            + +    + ++ +RL   E+RQ QM++ LA LL+ P F   L    QQ E+ S   KR+ L+       D  +S+S    E   +   TS   PA
Sbjct:  118 SFVRQLNTYGFRKVHADRWEFAHEDFLRHSKHLLKKIVRRR--SSPTQQSGLQPGSSGESGLDPELNTLRREKSALLQEVTRLKQEHLQTIEQMSTLNQRLESAEDRQKQMVSFLAKLLQNPTFLRQLKMHRQQKEIDSTRVKRKFLKHVPHGNIDSGESSSQHTGESNLDFSPTSLDLPA 296          
BLAST of CX294355 vs. ExPASy Swiss-Prot
Match: HFA6A_ORYSJ (Putative heat stress transcription factor A-6a OS=Oryza sativa subsp. japonica GN=HSFA6A PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.506e-18
Identity = 57/145 (39.31%), Postives = 74/145 (51.03%), Query Frame = 2
Query:   11 SFVRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHSTQSPTP-LTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGF--SSALNQQAEVHSKKRRLL 436
            SF+RQLNTYGFRK+  D+WEFANE+F+ GQRHLL NI RR+      T S TP          E ++ERL+++                E    +  +  R+R  E RQ Q    LA  L+ P    + A    A V  KKRR+L
Sbjct:   95 SFLRQLNTYGFRKVSADRWEFANEDFLGGQRHLLANIRRRR--RGAGTGSTTPRAVNCGGGGGEGEVERLRRDKEALARELARLRRQQQEARAQLLDMERRVRGTERRQEQCTEFLARALRSPDVLDNIARRHAAAVERKKRRML 237          
BLAST of CX294355 vs. ExPASy Swiss-Prot
Match: HFA6A_ARATH (Heat stress transcription factor A-6a OS=Arabidopsis thaliana GN=HSFA6A PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.272e-18
Identity = 49/131 (37.40%), Postives = 71/131 (54.20%), Query Frame = 2
Query:   11 SFVRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHSTQSPTPLTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGFSSALNQQ 403
            SFVRQLNTYGF+KID ++WEFANE F++G+RHLLKNI RRK      TQS            E +I  L+++                  + ++  + E+L+  E +Q  M+  L   +KKP F  +L ++
Sbjct:   70 SFVRQLNTYGFKKIDTERWEFANEHFLKGERHLLKNIKRRKTSSQTQTQS-----------LEGEIHELRRDRMALEVELVRLRRKQESVKTYLHLMEEKLKVTEVKQEMMMNFLLKKIKKPSFLQSLRKR 189          
BLAST of CX294355 vs. ExPASy Swiss-Prot
Match: HSFA9_ARATH (Heat stress transcription factor A-9 OS=Arabidopsis thaliana GN=HSFA9 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.121e-17
Identity = 56/166 (33.73%), Postives = 87/166 (52.41%), Query Frame = 2
Query:   11 SFVRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRR-KPVHSHSTQSPTPLTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGFSSALNQQAEVHSKKRRLLRPTTIEYFDDVKSASLSVNEQKE 505
            SF+RQLN+YGF+K+D D+WEFANE F  G++HLLKNI RR K     + ++ T  TETE       +E LK+E S              E ++ + +V+E++  ++  Q  M++  A L K   F   L        KKR++     +E  + VK   L  +++ +
Sbjct:  122 SFIRQLNSYGFKKVDSDRWEFANEGFQGGKKHLLKNIKRRSKNTKCCNKEASTTTTETE-------VESLKEEQSPMRLEMLKLKQQQEESQHQMVTVQEKIHGVDTEQQHMLSFFAKLAKDQRFVERL-------VKKRKMKIQRELEAAEFVKKLKLLQDQETQ 273          
BLAST of CX294355 vs. ExPASy Swiss-Prot
Match: HFA7A_ARATH (Heat stress transcription factor A-7a OS=Arabidopsis thaliana GN=HSFA7A PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.618e-17
Identity = 49/138 (35.51%), Postives = 74/138 (53.62%), Query Frame = 2
Query:   11 SFVRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHSTQSPTPLTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGFSSALNQQAEVHSKK 424
            SF+RQLNTYGFRKI+ ++WEFANEEF+ GQR LLKNI RR P    S+ S     E  R +    +E +                     + +++++ +R+   E +Q QM++ LA  ++ P F   L +Q +   K+
Sbjct:   80 SFIRQLNTYGFRKIEAERWEFANEEFLLGQRQLLKNIKRRNPFTPSSSPSHDACNELRREKQVLMMEIVSLRQQ------------QQTTKSYIKAMEQRIEGTERKQRQMMSFLARAMQSPSFLHQLLKQRDKKIKE 205          
BLAST of CX294355 vs. ExPASy Swiss-Prot
Match: HFA6B_ORYSJ (Heat stress transcription factor A-6a OS=Oryza sativa subsp. japonica GN=HSFA6B PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.000e-16
Identity = 48/127 (37.80%), Postives = 70/127 (55.12%), Query Frame = 2
Query:   11 SFVRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRR---KPVHSHSTQSPTPLTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGF 382
            SFVRQLNTYGFRK+ PD+WEFANE F+ GQ+HLLKNI RR   KP+     ++   +    + E   ++  LK++ +             +  +  + ++ E +R +E RQ Q I   A +L  P F
Sbjct:  146 SFVRQLNTYGFRKVTPDRWEFANEAFLAGQKHLLKNIKRRRVSKPLVDSQLRNKASVV-FGQPEAPGEVVSLKRDRAALRAEVIMLKQQYNACKSQLIAMEEMVRNIERRQQQTIGFFAKVLTNPAF 271          
The following BLAST results are available for this feature:
BLAST of CX294355 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
HFA2A_ORYSJ1.202e-2037.18Heat stress transcription factor A-2a OS=Oryza sat... [more]
HFA6B_ARATH4.566e-2036.81Heat stress transcription factor A-6b OS=Arabidops... [more]
HSFA9_ORYSJ7.789e-2038.96Heat stress transcription factor A-9 OS=Oryza sati... [more]
HSF30_SOLPE1.735e-1934.48Heat shock factor protein HSF30 OS=Solanum peruvia... [more]
HSFA3_ORYSJ1.125e-1834.81Heat stress transcription factor A-3 OS=Oryza sati... [more]
HFA6A_ORYSJ2.506e-1839.31Putative heat stress transcription factor A-6a OS=... [more]
HFA6A_ARATH3.272e-1837.40Heat stress transcription factor A-6a OS=Arabidops... [more]
HSFA9_ARATH2.121e-1733.73Heat stress transcription factor A-9 OS=Arabidopsi... [more]
HFA7A_ARATH3.618e-1735.51Heat stress transcription factor A-7a OS=Arabidops... [more]
HFA6B_ORYSJ4.000e-1637.80Heat stress transcription factor A-6a OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionC05015F06SK FlavSen1 Citrus clementina cDNA clone C05015F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294355 ID=CX294355; Name=CX294355; organism=Citrus clementina; type=EST; length=546bp
GGCTGCAGGCAGTTTTGTGAGGCAGCTGAATACATATGGATTCAGGAAGA
TTGATCCTGATCAGTGGGAGTTTGCAAATGAGGAATTCATACGAGGACAG
AGGCATCTCTTAAAGAACATTCACAGACGCAAGCCAGTTCACAGCCATTC
CACGCAGTCTCCCACTCCACTAACCGAAACGGAAAGAAATGAATTCGAGG
CCAAAATTGAGAGACTCAAAAAGGAGAATAGCTTACTTCAATTAGAGCTG
CGGAGGCGTGAGGGTGGAAATCACGAGTTTGAGTATCATGTTCAATCAGT
ACGCGAGCGTCTAAGGTACTTGGAAAATCGACAGACGCAAATGATCGCCT
GTTTAGCTAACCTGTTGAAGAAACCGGGATTTTCCTCGGCTCTTAATCAA
CAAGCAGAAGTTCACAGCAAAAAGAGAAGGCTGTTGAGGCCTACGACTAT
TGAATACTTTGATGATGTAAAATCCGCAAGCCTAAGTGTGAATGAACAGA
AAGAGAACCCAGATGCTACTTCTGATCCATCTCCGGCGTTGAATTT
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