CX294355
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294355 vs. ExPASy Swiss-Prot
Match: HFC1B_ORYSJ (Heat stress transcription factor C-1b OS=Oryza sativa subsp. japonica GN=HSFC1B PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.224e-16 Identity = 53/125 (42.40%), Postives = 70/125 (56.00%), Query Frame = 2 Query: 11 SFVRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHSTQSPTPLTETE--RNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPG 379 SFVRQLNTYGFRK+DPD+WEFA+E F+RGQ LL I R+K + E E R EA ++RL++E E +Q++ +RLR E+R QM+A LA L +PG Sbjct: 75 SFVRQLNTYGFRKVDPDRWEFAHESFLRGQAQLLPRIVRKKKKGGAAPGCRELCEEGEEVRGTIEA-VQRLREE--------------QRGMEEELQAMDQRLRAAESRPGQMMAFLAKLADEPG 184
BLAST of CX294355 vs. ExPASy Swiss-Prot
Match: HSFA8_ARATH (Heat stress transcription factor A-8 OS=Arabidopsis thaliana GN=HSFA8 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.520e-15 Identity = 49/143 (34.27%), Postives = 78/143 (54.55%), Query Frame = 2 Query: 11 SFVRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHSTQSPTPLTET----ERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGFSSALNQQAEVHSKKR 427 SF+RQLN YGFRK+D D+WEFAN+ F+RGQ+ LLKN+ RRK V S S QS T T E++ +++ LK + + + + +R++ +E Q +M++ L ++K P L Q E ++ ++ Sbjct: 71 SFIRQLNIYGFRKVDADRWEFANDGFVRGQKDLLKNVIRRKNVQS-SEQSKHESTSTTYAQEKSGLWKEVDILKGDKQVLAQELIKVRQYQEVTDTKMLHLEDRVQGMEESQQEMLSFLVMVMKNPSLLVQLLQPKEKNTWRK 212
BLAST of CX294355 vs. ExPASy Swiss-Prot
Match: HFA7B_ARATH (Heat stress transcription factor A-7b OS=Arabidopsis thaliana GN=HSFA7B PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 3.744e-14 Identity = 48/169 (28.40%), Postives = 87/169 (51.48%), Query Frame = 2 Query: 11 SFVRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHSTQSPTPL----TETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPG-----FSSALNQQAEVHSKKRRLLRPTTIEYFDDVKSASLSV 490 SFVRQLNTYGFRKI+ ++WEF NE F+ GQR LLK+I RR S+ SP L ++ E ++ ++ +L++E +VQ++ +R+ E +Q M++ L ++ P F +++ + L++ +E+ ++++ +L + Sbjct: 79 SFVRQLNTYGFRKIEAERWEFMNEGFLMGQRDLLKSIKRRT-----SSSSPPSLNYSQSQPEAHDPGVELPQLREERHVLMMEISTLRQEEQRARGYVQAMEQRINGAEKKQRHMMSFLRRAVENPSLLQQIFEQKRDREEAAMIDQAGLIKMEEVEHLSELEALALEM 242
BLAST of CX294355 vs. ExPASy Swiss-Prot
Match: HFB4C_ORYSJ (Heat stress transcription factor B-4c OS=Oryza sativa subsp. japonica GN=HSFB4C PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.204e-12 Identity = 35/53 (66.04%), Postives = 42/53 (79.25%), Query Frame = 2 Query: 11 SFVRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHSTQSPTP 169 SFVRQLNTYGFRK+ P++WEFANE F +G++ LL IHRRK S ST SP+P Sbjct: 76 SFVRQLNTYGFRKVVPERWEFANEFFRKGEKQLLTEIHRRK-TSSASTASPSP 127
BLAST of CX294355 vs. ExPASy Swiss-Prot
Match: HSFB4_ARATH (Heat stress transcription factor B-4 OS=Arabidopsis thaliana GN=HSFB4 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.054e-12 Identity = 33/41 (80.49%), Postives = 36/41 (87.80%), Query Frame = 2 Query: 11 SFVRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRK 133 SFVRQLNTYGFRKI PD+WEFANE F RG++HLL IHRRK Sbjct: 85 SFVRQLNTYGFRKIVPDRWEFANEFFKRGEKHLLCEIHRRK 125
BLAST of CX294355 vs. ExPASy Swiss-Prot
Match: HFC2B_ORYSJ (Heat stress transcription factor C-2b OS=Oryza sativa subsp. japonica GN=HSFC2B PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.054e-12 Identity = 31/40 (77.50%), Postives = 36/40 (90.00%), Query Frame = 2 Query: 11 SFVRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRR 130 SFVRQLNTYGFRK+DPD+WEFA+ F+RGQ HLL+NI RR Sbjct: 62 SFVRQLNTYGFRKVDPDRWEFAHASFLRGQTHLLRNIVRR 101
BLAST of CX294355 vs. ExPASy Swiss-Prot
Match: HFB2C_ORYSJ (Heat stress transcription factor B-2c OS=Oryza sativa subsp. japonica GN=HSFB2C PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.054e-12 Identity = 34/53 (64.15%), Postives = 41/53 (77.36%), Query Frame = 2 Query: 11 SFVRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHSTQSPTP 169 SFVRQLNTYGFRKI PD+WEFAN+ F RG++ LL +IHRRK V + + P P Sbjct: 89 SFVRQLNTYGFRKIVPDRWEFANDCFRRGEKRLLCDIHRRKVVAAAAAAPPPP 141
BLAST of CX294355 vs. ExPASy Swiss-Prot
Match: HFB4D_ORYSJ (Heat stress transcription factor B-4d OS=Oryza sativa subsp. japonica GN=HSFB4D PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.683e-12 Identity = 34/53 (64.15%), Postives = 37/53 (69.81%), Query Frame = 2 Query: 11 SFVRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHSTQSPTP 169 SFVRQLNTYGFRKI D+WEFANE F +G +HLL IHRRK Q P P Sbjct: 87 SFVRQLNTYGFRKIVADRWEFANEFFRKGAKHLLSEIHRRKSSSCSQPQPPPP 139
BLAST of CX294355 vs. ExPASy Swiss-Prot
Match: HFC2A_ORYSJ (Heat stress transcription factor C-2a OS=Oryza sativa subsp. japonica GN=HSFC2A PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.504e-12 Identity = 44/122 (36.07%), Postives = 62/122 (50.82%), Query Frame = 2 Query: 11 SFVRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHSTQSPTPLTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKP 376 SFVRQLNTYGFRK+DPD+WEFA+ F+RGQ HLL+ I RR + + EA + +E++ E E V ++ R++ E R QM+A L ++ P Sbjct: 65 SFVRQLNTYGFRKVDPDRWEFAHVSFLRGQTHLLRRIVRRSSGGGGAKRKEE--AGGCGGGGEAAAGDVDEESAVVALEVARLRREQREIEGRVAAMWRRVQETERRPKQMLAFLVKVVGDP 184
BLAST of CX294355 vs. ExPASy Swiss-Prot
Match: HSF24_SOLPE (Heat shock factor protein HSF24 OS=Solanum peruvianum GN=HSF24 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 7.807e-12 Identity = 34/45 (75.56%), Postives = 36/45 (80.00%), Query Frame = 2 Query: 11 SFVRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHS 145 SFVRQLNTYGFRKI PD+WEFANE F RGQ+ LL I RRK V S Sbjct: 60 SFVRQLNTYGFRKIVPDKWEFANENFKRGQKELLTAIRRRKTVTS 104 The following BLAST results are available for this feature:
BLAST of CX294355 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294355 ID=CX294355; Name=CX294355; organism=Citrus clementina; type=EST; length=546bpback to top |