CX294356

Overview
NameCX294356
Unique NameCX294356
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length558
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294356 vs. ExPASy Swiss-Prot
Match: PROFA_ORYSJ (Profilin-A OS=Oryza sativa subsp. japonica GN=Os10g0323600 PE=2 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 2.366e-59
Identity = 101/129 (78.29%), Postives = 118/129 (91.47%), Query Frame = 3
Query:   39 WQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 425
            WQ YVD+HL+CEIEG+HL++AAI+GHDG+VWAQS  FPQ KPEE+T IM DF+EPG LAPTGL+LG TKYMVIQGEPGAVIRGKKG GG+T+KKT  AL++GIYDEPMTPGQCNM+VERLGDYL++QGL
Sbjct:    3 WQTYVDEHLMCEIEGHHLTSAAIVGHDGTVWAQSAAFPQFKPEEMTNIMKDFDEPGFLAPTGLFLGPTKYMVIQGEPGAVIRGKKGSGGITVKKTGQALVVGIYDEPMTPGQCNMVVERLGDYLVEQGL 131          
BLAST of CX294356 vs. ExPASy Swiss-Prot
Match: PROF6_HEVBR (Profilin-6 OS=Hevea brasiliensis PE=1 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 3.090e-59
Identity = 102/129 (79.07%), Postives = 118/129 (91.47%), Query Frame = 3
Query:   39 WQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 425
            WQ YVDDHL+C+I+G+ L+AAAIIGHDGSVWAQS +FPQ K +E+  +M DF+EPG+LAPTGL+LGGTKYMVIQGEPGAVIRGKKG GG+T+KKT  ALIIGIYDEP+TPGQCNMIVERLGDYL+DQGL
Sbjct:    3 WQTYVDDHLMCDIDGHRLTAAAIIGHDGSVWAQSSSFPQFKSDEVAAVMKDFDEPGSLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITVKKTGQALIIGIYDEPLTPGQCNMIVERLGDYLLDQGL 131          
BLAST of CX294356 vs. ExPASy Swiss-Prot
Match: PROF1_WHEAT (Profilin-1 (Fragment) OS=Triticum aestivum GN=PRO1 PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 4.036e-59
Identity = 102/128 (79.69%), Postives = 114/128 (89.06%), Query Frame = 3
Query:   39 WQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQG 422
            WQ YVDDHL CEI+G HL++AAI+GHDGSVW +S NFP+ KPEEI GI+ DF EPG LAPTGL+LGGTKYMVIQGEPG VIRGKKG GG+TIKKT  ALI+GIYDEPMTPGQCN++VERLGDYLIDQG
Sbjct:    3 WQTYVDDHLCCEIDGQHLTSAAILGHDGSVWTESPNFPKFKPEEIAGIVKDFEEPGHLAPTGLFLGGTKYMVIQGEPGVVIRGKKGTGGITIKKTGMALILGIYDEPMTPGQCNLVVERLGDYLIDQG 130          
BLAST of CX294356 vs. ExPASy Swiss-Prot
Match: PROF1_PHLPR (Profilin-1 OS=Phleum pratense GN=PRO1 PE=1 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 5.271e-59
Identity = 99/129 (76.74%), Postives = 118/129 (91.47%), Query Frame = 3
Query:   39 WQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 425
            WQ YVD+HL+CEIEG+HL++AAI+GHDG+VWAQS +FPQ KPEEITGIM DF+EPG LAPTG+++ G KYMVIQGEPG VIRGKKG GG+TIKKT  AL++GIYDEPMTPGQCNM+VERLGDYL++QG+
Sbjct:    3 WQTYVDEHLMCEIEGHHLASAAILGHDGTVWAQSADFPQFKPEEITGIMKDFDEPGHLAPTGMFVAGAKYMVIQGEPGRVIRGKKGAGGITIKKTGQALVVGIYDEPMTPGQCNMVVERLGDYLVEQGM 131          
BLAST of CX294356 vs. ExPASy Swiss-Prot
Match: PROF_CYNDA (Profilin OS=Cynodon dactylon GN=PRO1 PE=1 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 8.992e-59
Identity = 102/129 (79.07%), Postives = 117/129 (90.70%), Query Frame = 3
Query:   39 WQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 425
            WQAYVDDHL+CEIEG+HL++AAIIGHDG+VWAQS  FP  KPEE+  IM DF+EPG LAPTGL+LG TKYMVIQGEPGAVIRGKKG GGVT+KKT  AL+IGIYDEPMTPGQCNM++E+LGDYLI+QG+
Sbjct:    3 WQAYVDDHLMCEIEGHHLTSAAIIGHDGTVWAQSAAFPAFKPEEMANIMKDFDEPGFLAPTGLFLGPTKYMVIQGEPGAVIRGKKGSGGVTVKKTGQALVIGIYDEPMTPGQCNMVIEKLGDYLIEQGM 131          
BLAST of CX294356 vs. ExPASy Swiss-Prot
Match: PROF3_WHEAT (Profilin-3 OS=Triticum aestivum GN=PRO3 PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 8.992e-59
Identity = 103/128 (80.47%), Postives = 115/128 (89.84%), Query Frame = 3
Query:   39 WQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQG 422
            W+AYVDDHL CEI+G +L++AAI+GHDGSVWAQS NFPQ KPEE  GI+ DF EPG LAPTGL+LGGTKYMVIQGEPG VIRGKKG GG+TIKKT  ALI+GIYDEPMTPGQCN++VERLGDYLIDQG
Sbjct:    3 WKAYVDDHLCCEIDGQNLTSAAILGHDGSVWAQSPNFPQFKPEENAGIVKDFEEPGHLAPTGLFLGGTKYMVIQGEPGVVIRGKKGTGGITIKKTGMALILGIYDEPMTPGQCNLVVERLGDYLIDQG 130          
BLAST of CX294356 vs. ExPASy Swiss-Prot
Match: PROF3_MALDO (Profilin-3 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 8.992e-59
Identity = 102/129 (79.07%), Postives = 119/129 (92.25%), Query Frame = 3
Query:   39 WQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 425
            WQAYVDDHL+C+I+GN L+AAAI+G DGSVW+QS +FP  KPEEI  I+ DF++PGTLAPTGL+LGGTKYMVIQGEPGAVIRGKKG GG+TIKKTS AL+IGIYDEP+TPGQCN++VERLGDYLI+QGL
Sbjct:    3 WQAYVDDHLMCDIDGNRLTAAAILGQDGSVWSQSASFPAFKPEEIAAILKDFDQPGTLAPTGLFLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTSQALLIGIYDEPVTPGQCNIVVERLGDYLIEQGL 131          
BLAST of CX294356 vs. ExPASy Swiss-Prot
Match: PROF1_PARJU (Profilin-1 OS=Parietaria judaica GN=PRO1 PE=1 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 8.992e-59
Identity = 104/130 (80.00%), Postives = 119/130 (91.54%), Query Frame = 3
Query:   39 WQAYVDDHLLCEI-EGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 425
            WQAYVDDHL+C++ +GN  ++AAIIGHDGSVWAQS NFPQLKPEE+TGIMNDFNE G LAPTGL+LGGTKYMVIQGE GAVIRGKKG GG T+KKT  A++IGIYDEPMTPGQCN++VERLGDYL++QGL
Sbjct:    3 WQAYVDDHLMCDVGDGNTPASAAIIGHDGSVWAQSANFPQLKPEEVTGIMNDFNEAGFLAPTGLFLGGTKYMVIQGESGAVIRGKKGSGGATLKKTGQAIVIGIYDEPMTPGQCNLVVERLGDYLLEQGL 132          
BLAST of CX294356 vs. ExPASy Swiss-Prot
Match: PROF3_MAIZE (Profilin-3 OS=Zea mays GN=PRO3 PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.174e-58
Identity = 101/129 (78.29%), Postives = 117/129 (90.70%), Query Frame = 3
Query:   39 WQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 425
            WQ YVD+HL+CEIEG+HLS+AAI+GHDG+VWAQS  FPQ KPEE+T I+ DF+EPG LAP GL+LG TKYMVIQGEPGAVIRGKKG GG+T+KKT  AL+IGIYDEPMTPGQCNM+VERLGDYL++QGL
Sbjct:    3 WQTYVDEHLMCEIEGHHLSSAAIVGHDGAVWAQSTAFPQFKPEEMTNIIKDFDEPGFLAPIGLFLGPTKYMVIQGEPGAVIRGKKGSGGITVKKTGQALVIGIYDEPMTPGQCNMVVERLGDYLVEQGL 131          
BLAST of CX294356 vs. ExPASy Swiss-Prot
Match: PROF1_MALDO (Profilin-1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.174e-58
Identity = 103/129 (79.84%), Postives = 117/129 (90.70%), Query Frame = 3
Query:   39 WQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 425
            WQAYVDD L+C+I+G+HL+AAAI+GHDGSVWA S  FP+ KPEEIT IM DF+EPG+LAPTGL+LGGTKYMVIQGE GAVIRGKKG GGVT+KKT  AL+ GIY+EP+TPGQCNMIVERLGDYLIDQGL
Sbjct:    3 WQAYVDDRLMCDIDGHHLTAAAILGHDGSVWAHSSTFPKFKPEEITAIMKDFDEPGSLAPTGLHLGGTKYMVIQGEGGAVIRGKKGSGGVTVKKTGQALVFGIYEEPLTPGQCNMIVERLGDYLIDQGL 131          
The following BLAST results are available for this feature:
BLAST of CX294356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
PROFA_ORYSJ2.366e-5978.29Profilin-A OS=Oryza sativa subsp. japonica GN=Os10... [more]
PROF6_HEVBR3.090e-5979.07Profilin-6 OS=Hevea brasiliensis PE=1 SV=1[more]
PROF1_WHEAT4.036e-5979.69Profilin-1 (Fragment) OS=Triticum aestivum GN=PRO1... [more]
PROF1_PHLPR5.271e-5976.74Profilin-1 OS=Phleum pratense GN=PRO1 PE=1 SV=1[more]
PROF_CYNDA8.992e-5979.07Profilin OS=Cynodon dactylon GN=PRO1 PE=1 SV=1[more]
PROF3_WHEAT8.992e-5980.47Profilin-3 OS=Triticum aestivum GN=PRO3 PE=2 SV=1[more]
PROF3_MALDO8.992e-5979.07Profilin-3 OS=Malus domestica PE=1 SV=1[more]
PROF1_PARJU8.992e-5980.00Profilin-1 OS=Parietaria judaica GN=PRO1 PE=1 SV=1[more]
PROF3_MAIZE1.174e-5878.29Profilin-3 OS=Zea mays GN=PRO3 PE=2 SV=1[more]
PROF1_MALDO1.174e-5879.84Profilin-1 OS=Malus domestica PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC05015F07SK FlavSen1 Citrus clementina cDNA clone C05015F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294356 ID=CX294356; Name=CX294356; organism=Citrus clementina; type=EST; length=558bp
AGAAATCAGAGGAATCTTCAAAGCAGAAAAAGATGTCGTGGCAAGCTTAC
GTCGATGATCATCTGTTGTGTGAAATTGAGGGTAACCATCTCTCAGCTGC
CGCTATCATCGGCCACGACGGCAGCGTTTGGGCCCAGAGTGAAAACTTCC
CTCAGTTAAAACCTGAGGAAATAACTGGTATCATGAATGACTTTAATGAA
CCTGGAACACTAGCACCAACTGGACTGTATCTTGGTGGCACAAAATATAT
GGTGATCCAGGGTGAGCCAGGTGCTGTCATCCGAGGGAAGAAGGGCCCTG
GTGGTGTTACCATCAAGAAGACCAGTGCGGCCTTAATCATTGGAATCTAT
GATGAGCCGATGACCCCTGGGCAGTGCAACATGATTGTTGAAAGGCTTGG
TGATTATCTCATTGATCAGGGTCTTTAGGTGGTTTGCATGTCCGCTAATT
TGTTTCATTTCTTGGCTTCCCTAAAAAGCTCGCACTGTTGAACTTCGGTG
TAATAATATTACAGTATTCAAAGTTATGGGAACTGTGTGTGGAAAGGAAA
GGTTTGGT
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