CX294358

Overview
NameCX294358
Unique NameCX294358
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length606
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294358 vs. ExPASy Swiss-Prot
Match: WRK57_ARATH (Probable WRKY transcription factor 57 OS=Arabidopsis thaliana GN=WRKY57 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.482e-23
Identity = 47/70 (67.14%), Postives = 57/70 (81.43%), Query Frame = 1
Query:  241 RYAFQTRSQVDILDDGYRWRKYGQKVVKNSKFPRSYYKCTHKGCNVKKQVQRNTKDEEIVVTTYEGLHTH 450
            R+AF T+S VD L+DGYRWRKYGQK VKNS FPRSYY+CT+  C VKK+V+R++ D  IV+TTYEG H H
Sbjct:  134 RFAFMTKSDVDNLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSRCTVKKRVERSSDDPSIVITTYEGQHCH 203          
BLAST of CX294358 vs. ExPASy Swiss-Prot
Match: WRKY8_ARATH (Probable WRKY transcription factor 8 OS=Arabidopsis thaliana GN=WRKY8 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 4.312e-23
Identity = 45/72 (62.50%), Postives = 59/72 (81.94%), Query Frame = 1
Query:  241 RYAFQTRSQVDILDDGYRWRKYGQKVVKNSKFPRSYYKCTHKGCNVKKQVQRNTKDEEIVVTTYEGLHTHPI 456
            R +F T+++VD L+DGYRWRKYGQK VKNS +PRSYY+CT + CNVKK+V+R+ +D  +V+TTYE  H HPI
Sbjct:  170 RVSFMTKTEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCNVKKRVERSYQDPTVVITTYESQHNHPI 241          
BLAST of CX294358 vs. ExPASy Swiss-Prot
Match: WRK13_ARATH (Probable WRKY transcription factor 13 OS=Arabidopsis thaliana GN=WRKY13 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.639e-22
Identity = 45/70 (64.29%), Postives = 56/70 (80.00%), Query Frame = 1
Query:  241 RYAFQTRSQVDILDDGYRWRKYGQKVVKNSKFPRSYYKCTHKGCNVKKQVQRNTKDEEIVVTTYEGLHTH 450
            R+ F+T S+VD+LDDGYRWRKYGQKVVKN++ PRSYY+CT   C VKK+V+R   D  +V+TTYEG H H
Sbjct:  210 RFCFKTLSEVDVLDDGYRWRKYGQKVVKNTQHPRSYYRCTQDKCRVKKRVERLADDPRMVITTYEGRHLH 279          
BLAST of CX294358 vs. ExPASy Swiss-Prot
Match: WRK26_ARATH (Probable WRKY transcription factor 26 OS=Arabidopsis thaliana GN=WRKY26 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 2.795e-22
Identity = 58/141 (41.13%), Postives = 76/141 (53.90%), Query Frame = 1
Query:   34 VEQSHMDNSHLQSRFSASHSSLNMGIDPRAQ*HAVSEFQLYSGGASGTSGSDKAKQSXXXXXXXXXXXXRYAFQTRSQVDILDDGYRWRKYGQKVVKNSKFPRSYYKCTHKGCNVKKQVQRNTKDEEIVVTTYEGLHTHPI 456
            VE S +    ++  +  SH+        R+   A++  Q  S G     G D+  ++            R   QT S +DILDDGYRWRKYGQKVVK +  PRSYYKCT  GC V+K V+R  +D + V+TTYEG H H I
Sbjct:  153 VETSLVKGQMIEIVYKGSHNHPKPQSTKRSSSTAIAAHQNSSNGDGKDIGEDET-EAKRWKREENVKEPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTFTGCFVRKHVERAFQDPKSVITTYEGKHKHQI 292          

HSP 2 Score: 73.559 bits (179), Expect = 9.013e-13
Identity = 30/58 (51.72%), Postives = 40/58 (68.97%), Query Frame = 1
Query:  280 DDGYRWRKYGQKVVKNSKFPRSYYKCTHKGCNVKKQVQRNTKDEEIVVTTYEGLHTHP 453
            DDGY WRKYGQK VK S+ PRSY+KCT+  C  KK+V+ +    +++   Y+G H HP
Sbjct:  117 DDGYNWRKYGQKQVKGSENPRSYFKCTYPNCLTKKKVETSLVKGQMIEIVYKGSHNHP 174          
BLAST of CX294358 vs. ExPASy Swiss-Prot
Match: WRKY4_ARATH (Probable WRKY transcription factor 4 OS=Arabidopsis thaliana GN=WRKY4 PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 4.768e-22
Identity = 46/72 (63.89%), Postives = 54/72 (75.00%), Query Frame = 1
Query:  241 RYAFQTRSQVDILDDGYRWRKYGQKVVKNSKFPRSYYKCTHKGCNVKKQVQRNTKDEEIVVTTYEGLHTHPI 456
            R   QT S+VD+LDDGYRWRKYGQKVVK + +PRSYYKCT  GC V+K V+R   D + VVTTYEG H H +
Sbjct:  396 RIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCGVRKHVERAATDPKAVVTTYEGKHNHDL 467          

HSP 2 Score: 80.1073 bits (196), Expect = 9.629e-15
Identity = 35/57 (61.40%), Postives = 43/57 (75.44%), Query Frame = 1
Query:  280 DDGYRWRKYGQKVVKNSKFPRSYYKCTHKGCNVKKQVQRNTKDEEIVVTTYEGLHTH 450
            DDGY WRKYGQK VK S+FPRSYYKCT+ GC VKK+V+R+  D ++    Y+G H H
Sbjct:  229 DDGYNWRKYGQKQVKGSEFPRSYYKCTNPGCPVKKKVERSL-DGQVTEIIYKGQHNH 284          
BLAST of CX294358 vs. ExPASy Swiss-Prot
Match: WRKY3_ARATH (Probable WRKY transcription factor 3 OS=Arabidopsis thaliana GN=WRKY3 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.062e-21
Identity = 47/82 (57.32%), Postives = 56/82 (68.29%), Query Frame = 1
Query:  241 RYAFQTRSQVDILDDGYRWRKYGQKVVKNSKFPRSYYKCTHKGCNVKKQVQRNTKDEEIVVTTYEGLHTHPIGKITDSFEQI 486
            R   QT S+VD+LDDGYRWRKYGQKVVK + +PRSYYKCT   C V+K V+R   D + VVTTYEG H H +     S  Q+
Sbjct:  402 RIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPDCGVRKHVERAATDPKAVVTTYEGKHNHDVPAARTSSHQL 483          

HSP 2 Score: 81.6481 bits (200), Expect = 3.309e-15
Identity = 44/135 (32.59%), Postives = 65/135 (48.15%), Query Frame = 1
Query:   52 DNSHLQSRFSASHSSLNMGIDPRAQ*HAVSEFQLYSGGASGTSGSDKAKQSXXXXXXXXXXXXRYAFQTRSQVDILDDGYRWRKYGQKVVKNSKFPRSYYKCTHKGCNVKKQVQRNTKDEEIVVTTYEGLHTHPI 456
            +N H+Q    + + S       + Q  +++E   +S        +   + S             +  Q ++     DDGY WRKYGQK VK S FPRSYYKCTH  C VKK+V+R+  D ++    Y+G H H +
Sbjct:  174 NNVHMQQSQQSEYPSSTQQQQQQQQQASLTEIPSFSSAPRSQIRASVQETSQGQRETSEISVFEHRSQPQNADKPADDGYNWRKYGQKQVKGSDFPRSYYKCTHPACPVKKKVERSL-DGQVTEIIYKGQHNHEL 307          
BLAST of CX294358 vs. ExPASy Swiss-Prot
Match: WRKY2_ARATH (Probable WRKY transcription factor 2 OS=Arabidopsis thaliana GN=WRKY2 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.387e-21
Identity = 58/149 (38.93%), Postives = 76/149 (51.01%), Query Frame = 1
Query:   25 MVVVEQSHMDNSHLQSRFSASHSSLNMGIDPRAQ*HAVSEFQLYSGGASGTSGSDKAKQ-----SXXXXXXXXXXXXRYAFQTRSQVDILDDGYRWRKYGQKVVKNSKFPRSYYKCTHKGCNVKKQVQRNTKDEEIVVTTYEGLHTHPI 456
            +VVV+ S   ++        +H S+++G D               GG  G     K ++     +            R   QT S VDILDDGYRWRKYGQKVVK +  PRSYYKCT  GC V+K V+R + D + V+TTYEG H H +
Sbjct:  407 VVVVDASSTFSNDEDEDDRGTHGSVSLGYDGGGG----------GGGGEGDESESKRRKLEAFAAEMSGSTRAIREPRVVVQTTSDVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTAPGCTVRKHVERASHDLKSVITTYEGKHNHDV 545          

HSP 2 Score: 76.6406 bits (187), Expect = 1.065e-13
Identity = 32/57 (56.14%), Postives = 43/57 (75.44%), Query Frame = 1
Query:  280 DDGYRWRKYGQKVVKNSKFPRSYYKCTHKGCNVKKQVQRNTKDEEIVVTTYEGLHTH 450
            +DGY WRKYGQK+VK S++PRSYYKCT+  C VKK+V+R +++  I    Y+G H H
Sbjct:  273 EDGYNWRKYGQKLVKGSEYPRSYYKCTNPNCQVKKKVER-SREGHITEIIYKGAHNH 328          
BLAST of CX294358 vs. ExPASy Swiss-Prot
Match: WRK50_ARATH (Probable WRKY transcription factor 50 OS=Arabidopsis thaliana GN=WRKY50 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.387e-21
Identity = 43/70 (61.43%), Postives = 57/70 (81.43%), Query Frame = 1
Query:  241 RYAFQTRSQVDILDDGYRWRKYGQKVVKNSKFPRSYYKCTHKGCNVKKQVQRNTKDEEIVVTTYEGLHTH 450
            R AF+TRS+V++LDDG++WRKYG+K+VKNS  PR+YYKC+  GC VKK+V+R+  D   V+TTYEG H H
Sbjct:  100 RVAFKTRSEVEVLDDGFKWRKYGKKMVKNSPHPRNYYKCSVDGCPVKKRVERDRDDPSFVITTYEGSHNH 169          
BLAST of CX294358 vs. ExPASy Swiss-Prot
Match: WRK25_ARATH (Probable WRKY transcription factor 25 OS=Arabidopsis thaliana GN=WRKY25 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.387e-21
Identity = 46/72 (63.89%), Postives = 54/72 (75.00%), Query Frame = 1
Query:  241 RYAFQTRSQVDILDDGYRWRKYGQKVVKNSKFPRSYYKCTHKGCNVKKQVQRNTKDEEIVVTTYEGLHTHPI 456
            R   QT S +D+L DG+RWRKYGQKVVK +  PRSYYKCT +GC VKKQV+R+  DE  V+TTYEG H H I
Sbjct:  315 RVVVQTISDIDVLIDGFRWRKYGQKVVKGNTNPRSYYKCTFQGCGVKKQVERSAADERAVLTTYEGRHNHDI 386          

HSP 2 Score: 67.781 bits (164), Expect = 4.945e-11
Identity = 31/63 (49.21%), Postives = 40/63 (63.49%), Query Frame = 1
Query:  280 DDGYRWRKYGQKVVKNSKFPRSYYKCTHKGCNVKKQVQRNTKDEEIVVTTYEGLHTHPIGKIT 468
            +DGY WRKYGQK VK S+ PRSY+KCT+  C V K++     D +I    Y+G H HP  + T
Sbjct:  166 NDGYGWRKYGQKQVKKSENPRSYFKCTYPDC-VSKKIVETASDGQITEIIYKGGHNHPKPEFT 227          
BLAST of CX294358 vs. ExPASy Swiss-Prot
Match: WRK34_ARATH (Probable WRKY transcription factor 34 OS=Arabidopsis thaliana GN=WRKY34 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.812e-21
Identity = 56/124 (45.16%), Postives = 73/124 (58.87%), Query Frame = 1
Query:   85 SHSSLNMGIDPRAQ*HAVSEFQLYSGGASGTSGSDKAKQSXXXXXXXXXXXXRYAFQTRSQVDILDDGYRWRKYGQKVVKNSKFPRSYYKCTHKGCNVKKQVQRNTKDEEIVVTTYEGLHTHPI 456
            SH S+++  D   +  + S+ +     A+ TSGS +A +             R   QT S +DILDDGYRWRKYGQKVVK +  PRSYYKCT  GC V K V+R + D + V+TTY G HTH +
Sbjct:  319 SHMSVSLTYDGEVE-ESESKRRKLEAYATETSGSTRASREP-----------RVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTANGCTVTKHVERASDDFKSVLTTYIGKHTHVV 430          

HSP 2 Score: 78.1814 bits (191), Expect = 3.659e-14
Identity = 33/57 (57.89%), Postives = 42/57 (73.68%), Query Frame = 1
Query:  280 DDGYRWRKYGQKVVKNSKFPRSYYKCTHKGCNVKKQVQRNTKDEEIVVTTYEGLHTH 450
            DDGY WRKYGQK+VK S++PRSYYKCTH  C  KK+V+R +++  I+   Y G H H
Sbjct:  178 DDGYNWRKYGQKLVKGSEYPRSYYKCTHPNCEAKKKVER-SREGHIIEIIYTGDHIH 233          
The following BLAST results are available for this feature:
BLAST of CX294358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
WRK57_ARATH1.482e-2367.14Probable WRKY transcription factor 57 OS=Arabidops... [more]
WRKY8_ARATH4.312e-2362.50Probable WRKY transcription factor 8 OS=Arabidopsi... [more]
WRK13_ARATH1.639e-2264.29Probable WRKY transcription factor 13 OS=Arabidops... [more]
WRK26_ARATH2.795e-2241.13Probable WRKY transcription factor 26 OS=Arabidops... [more]
WRKY4_ARATH4.768e-2263.89Probable WRKY transcription factor 4 OS=Arabidopsi... [more]
WRKY3_ARATH1.062e-2157.32Probable WRKY transcription factor 3 OS=Arabidopsi... [more]
WRKY2_ARATH1.387e-2138.93Probable WRKY transcription factor 2 OS=Arabidopsi... [more]
WRK50_ARATH1.387e-2161.43Probable WRKY transcription factor 50 OS=Arabidops... [more]
WRK25_ARATH1.387e-2163.89Probable WRKY transcription factor 25 OS=Arabidops... [more]
WRK34_ARATH1.812e-2145.16Probable WRKY transcription factor 34 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionC05015F09SK FlavSen1 Citrus clementina cDNA clone C05015F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294358 ID=CX294358; Name=CX294358; organism=Citrus clementina; type=EST; length=606bp
TTTTAATTATTGTGCTTCTGCTTGATGGTAGTGGTAGAGCAGTCCCATAT
GGACAACTCCCATTTACAGTCAAGATTTTCAGCTTCTCATTCCTCATTGA
ACATGGGAATTGATCCCCGTGCACAATAACATGCTGTATCTGAATTTCAA
CTTTACTCAGGTGGTGCTAGTGGAACCTCTGGGAGTGATAAGGCGAAACA
ATCTGGAAAGAAAGGAGACCACAAAGGGACCAAAAAGCACAGATATGCTT
TTCAAACGAGAAGCCAGGTTGACATACTTGATGACGGTTATAGATGGAGG
AAATATGGACAAAAGGTTGTAAAGAACAGCAAGTTCCCCAGGAGTTACTA
CAAATGTACTCACAAAGGGTGCAATGTGAAAAAGCAAGTCCAACGCAATA
CAAAAGATGAAGAGATTGTGGTGACAACCTATGAAGGACTGCATACACAT
CCAATTGGGAAGATCACCGACAGCTTTGAACAGATCCTGCTGAAAGCATG
TACCACTTCGTAATTTGAAAGCTGTCGCCATTGATCCTCATTTCAAGAGT
GTTATGTGCCAGTGTTTGATGTATATGCCATTTATTATTGCTGACTTTCA
TTATCA
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