CX294359

Overview
NameCX294359
Unique NameCX294359
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length584
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294359 vs. ExPASy Swiss-Prot
Match: HSP14_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-E PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.586e-48
Identity = 97/156 (62.18%), Postives = 120/156 (76.92%), Query Frame = 3
Query:   42 MSLIPSIFGGRRTNVLYPVSLYVWDPFHWFLSSAVTNAPSSAT--ETSHVANA*IDWIETPQARVFKADLPGLMKEELYVEVD*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTVPKQEEKKPEVRLL 503
            MSLIP  FGGRR+NV  P SL +WDPF  F      + P+S+   E S   +  +DW ETP+A VFKAD+PGL KEE+ V+++  R+LQISGER+ E+E+KND WHRVERSSGKF RRFRLP+NAKV +VKASMENGVLTVTVPK+E KKP+V+ +
Sbjct:    1 MSLIPGFFGGRRSNVFDPFSLDMWDPFKDF------HVPTSSVSAENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVERSSGKFTRRFRLPENAKVNEVKASMENGVLTVTVPKEEVKKPDVKAI 150          
BLAST of CX294359 vs. ExPASy Swiss-Prot
Match: HS17A_ORYSJ (17.9 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.9A PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.071e-48
Identity = 102/154 (66.23%), Postives = 121/154 (78.57%), Query Frame = 3
Query:   72 RRTNVLYPVSLYVWDPFHWFL-----SSAVTNAPS----SATETSHVANA*IDWIETPQARVFKADLPGLMKEELYVEVD*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTVPKQEEKKPEVRLLR 506
            RR+NV  P SL +WDPF  F      SS+ +  PS    +++ET+  A A IDW ETP+A VFKAD+PGL KEE+ VEVD G ILQISGER+KEQEEK D+WHRVERSSGKFLRRFRLPDNAK EQ+KASMENGVLTVTVPK+E KKP+V+ ++
Sbjct:    5 RRSNVFDPFSLDLWDPFDGFPFGSGGSSSGSIFPSFPRGASSETAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPEQIKASMENGVLTVTVPKEEAKKPDVKSIQ 158          
BLAST of CX294359 vs. ExPASy Swiss-Prot
Match: HSP11_HELAN (17.6 kDa class I heat shock protein OS=Helianthus annuus GN=HSP17.6 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 4.614e-48
Identity = 96/155 (61.94%), Postives = 119/155 (76.77%), Query Frame = 3
Query:   42 MSLIPSIFGGRRTNVLYPVSLYVWDPFHWFLSSAVTNAPSSATETSHVANA*IDWIETPQARVFKADLPGLMKEELYVEVD*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTVPK-QEEKKPEVRLL 503
            MS+IPS F  +R+N+  P SL  WDPF   +S+        A ET+ + NA IDW ETP+A V KADLPG+ KEE+ VEV+ GR+LQISGER +EQEEK+D WHRVERSSGKF+RRFRLP+NAK+++VKA MENGVLTV VPK +EEKKP V+ +
Sbjct:    1 MSIIPSFFTSKRSNIFDPFSLDTWDPFQGIIST------EPARETAAIVNARIDWKETPEAHVLKADLPGMKKEEVKVEVEDGRVLQISGERCREQEEKDDTWHRVERSSGKFIRRFRLPENAKMDEVKAMMENGVLTVVVPKEEEEKKPMVKAI 149          
BLAST of CX294359 vs. ExPASy Swiss-Prot
Match: HS181_ORYSJ (18.1 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.753e-47
Identity = 97/154 (62.99%), Postives = 117/154 (75.97%), Query Frame = 3
Query:   72 RRTNVLYPVSLYVWDPFHWFLSSAVTNAPSS---------ATETSHVANA*IDWIETPQARVFKADLPGLMKEELYVEVD*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTVPKQEEKKPEVRLLR 506
            RR+NV  P SL +WDPF  F   + + +  S         ++ET+  A A IDW ETP+A VFKAD+PGL KEE+ VEV+ G +LQISGERSKEQEEK DKWHRVERSSGKFLRRFRLP+N K EQ+KASMENGVLTVTVPK+E KKP+V+ ++
Sbjct:    5 RRSNVFDPFSLDLWDPFDGFPFGSGSRSSGSIFPSFPRGTSSETAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVPKEEPKKPDVKSIQ 158          
BLAST of CX294359 vs. ExPASy Swiss-Prot
Match: HSP15_SOYBN (17.6 kDa class I heat shock protein OS=Glycine max GN=HSP17.6-L PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 8.701e-47
Identity = 95/154 (61.69%), Postives = 118/154 (76.62%), Query Frame = 3
Query:   42 MSLIPSIFGGRRTNVLYPVSLYVWDPFHWFLSSAVTNAPSSAT--ETSHVANA*IDWIETPQARVFKADLPGLMKEELYVEVD*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTVPKQEEKKPEVR 497
            MSLIPSIFGG R+NV  P SL +WDPF  F      + P+S+   E S   N  +DW ET +A V KAD+PGL KEE+ V+++  R+LQISGER+ E+E+KND WHRV+RSSGKF+RRFRLP+NAKVEQVKA MENGVLTVT+PK+E KK +V+
Sbjct:    1 MSLIPSIFGGPRSNVFDPFSLDMWDPFKDF------HVPTSSVSAENSAFVNTRVDWKETQEAHVLKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVDRSSGKFMRRFRLPENAKVEQVKACMENGVLTVTIPKEEVKKSDVK 148          
BLAST of CX294359 vs. ExPASy Swiss-Prot
Match: HSP12_SOLPE (17.6 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 8.701e-47
Identity = 101/153 (66.01%), Postives = 120/153 (78.43%), Query Frame = 3
Query:   42 MSLIPSIFGGRR-TNVLYPVSLYVWDPFHWFLSSAVTNAPSSATETSHVANA*IDWIETPQARVFKADLPGLMKEELYVEVD*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTVPKQEEKKPEVR 497
            MSLIP IFG RR T+V  P S+ V+DPF   L   V+N+     ETS  AN  IDW ETP+A VFKADLPGL KEE+ VEV+  R+LQISGER+ E+E+KND WHRVERSSGKF+RRFRLP+NAK++QVKASMENGVLTVTVPK+E   P+V+
Sbjct:    1 MSLIPRIFGDRRSTSVFDPFSIDVFDPFKE-LGFTVSNSG----ETSAFANTRIDWKETPEAHVFKADLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEVNNPDVK 148          
BLAST of CX294359 vs. ExPASy Swiss-Prot
Match: HS174_ORYSJ (17.4 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.4 PE=2 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 8.701e-47
Identity = 94/147 (63.95%), Postives = 115/147 (78.23%), Query Frame = 3
Query:   72 RRTNVLYPVSLYVWDPFHWFLSSAVTNA--PSSATETSHVANA*IDWIETPQARVFKADLPGLMKEELYVEVD*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTVPKQEEKKPEVRLLR 506
            RR+NV  P SL +WDPF  F   + + +  P + ++ +  A A IDW ETP+A VFKAD+PGL KEE+ VEV+ G +LQISGER KEQEEK DKWHRVERSSGKFLRRFRLP+N K EQ+KASMENGVLTVTVPK+E KKP+V+ ++
Sbjct:    5 RRSNVFDPFSLDLWDPFDGFPFGSGSGSLFPRANSDAAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVPKEEPKKPDVKSIQ 151          
BLAST of CX294359 vs. ExPASy Swiss-Prot
Match: HSP11_SOLLC (17.8 kDa class I heat shock protein OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.136e-46
Identity = 97/153 (63.40%), Postives = 119/153 (77.78%), Query Frame = 3
Query:   42 MSLIPSIFGGRRTNVLY-PVSLYVWDPFHWFLSSAVTNAPSSATETSHVANA*IDWIETPQARVFKADLPGLMKEELYVEVD*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTVPKQEEKKPEVR 497
            MSLIP IFG RR++ ++ P S+ V+DPF      +  +  SSA      AN  IDW ETP+  VFK DLPGL KEE+ VEV+  R+LQISGER+ E+E+KNDKWHR+ERSSGKF+RRFRLP+NAK++QVKASMENGVLTVTVPK+E KKPEV+
Sbjct:    1 MSLIPRIFGDRRSSSMFDPFSIDVFDPFRELGFPSTNSGESSA-----FANTRIDWKETPEPHVFKVDLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDKWHRMERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEVKKPEVK 148          
BLAST of CX294359 vs. ExPASy Swiss-Prot
Match: HSP11_CHERU (18.3 kDa class I heat shock protein OS=Chenopodium rubrum GN=HSP18 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.136e-46
Identity = 98/159 (61.64%), Postives = 125/159 (78.62%), Query Frame = 3
Query:   42 MSLIPSIF--GGRRTNVLYPVSL-YVWDPFHWFLSSAVTNAPSSAT--ETSHVANA*IDWIETPQARVFKADLPGLMKEELYVEVD*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTVPKQEEKKPEVRLL 503
            MSLIP+ +   GRR+N+  P SL  +WDPF + L S ++  P S T  ET+  ANA IDW ETP+A VFKADLPG+ KEE+ VEV+ G +L+ISG+R++E+EEKND WHRVERSSG+F+R+FRLP+NAKV+QVKA MENGVLTVTVPK E  KP+V+ +
Sbjct:    1 MSLIPNNWFNTGRRSNIFDPFSLDEIWDPF-FGLPSTLSTVPRSETAAETAAFANARIDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLRISGQRAREKEEKNDTWHRVERSSGQFMRKFRLPENAKVDQVKAGMENGVLTVTVPKNEAPKPQVKAI 158          
BLAST of CX294359 vs. ExPASy Swiss-Prot
Match: HS16B_ORYSJ (16.9 kDa class I heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP16.9B PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.136e-46
Identity = 94/144 (65.28%), Postives = 114/144 (79.17%), Query Frame = 3
Query:   72 RRTNVLYPVSLYVWDPFHWFLSSAVTNAPSSATETSHVANA*IDWIETPQARVFKADLPGLMKEELYVEVD*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTVPKQEEKKPEVRLL 503
            RR+NV  P SL +WDPF     S V    +S  +T+  ANA IDW ETP++ VFKADLPG+ KEE+ VEV+ G +L ISG+RSKE+E+KNDKWHRVERSSG+F+RRFRLP+NAKV+QVKA MENGVLTVTVPK E KKPEV+ +
Sbjct:    5 RRSNVFDPFSLDLWDPFDSVFRSVVP--ATSDNDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGMENGVLTVTVPKAEVKKPEVKAI 146          
The following BLAST results are available for this feature:
BLAST of CX294359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
HSP14_SOYBN1.586e-4862.1817.5 kDa class I heat shock protein OS=Glycine max... [more]
HS17A_ORYSJ2.071e-4866.2317.9 kDa class I heat shock protein OS=Oryza sativ... [more]
HSP11_HELAN4.614e-4861.9417.6 kDa class I heat shock protein OS=Helianthus ... [more]
HS181_ORYSJ1.753e-4762.9918.1 kDa class I heat shock protein OS=Oryza sativ... [more]
HSP15_SOYBN8.701e-4761.6917.6 kDa class I heat shock protein OS=Glycine max... [more]
HSP12_SOLPE8.701e-4766.0117.6 kDa class I heat shock protein OS=Solanum per... [more]
HS174_ORYSJ8.701e-4763.9517.4 kDa class I heat shock protein OS=Oryza sativ... [more]
HSP11_SOLLC1.136e-4663.4017.8 kDa class I heat shock protein OS=Solanum lyc... [more]
HSP11_CHERU1.136e-4661.6418.3 kDa class I heat shock protein OS=Chenopodium... [more]
HS16B_ORYSJ1.136e-4665.2816.9 kDa class I heat shock protein 2 OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionC05015F10SK FlavSen1 Citrus clementina cDNA clone C05015F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294359 ID=CX294359; Name=CX294359; organism=Citrus clementina; type=EST; length=584bp
GAAGTTGTTGAGCATTTAATTACCGTGCCCACTTTGCCATAATGTCACTC
ATTCCAAGCATCTTCGGTGGCCGAAGAACCAACGTGCTCTATCCAGTTTC
ATTATATGTATGGGATCCTTTCCACTGGTTCTTGTCCTCGGCCGTTACCA
ACGCGCCGTCTTCTGCTACGGAAACATCCCATGTCGCCAATGCTTGAATT
GACTGGATAGAGACTCCTCAGGCTCGCGTATTCAAAGCTGATCTTCCAGG
GCTGATGAAAGAAGAATTATACGTTGAGGTTGATTAGGGCAGGATTCTGC
AAATAAGCGGAGAGAGGAGCAAGGAGCAGGAAGAGAAGAATGACAAGTGG
CATCGCGTCGAGAGGAGCAGTGGCAAGTTCCTGAGGAGGTTCAGGTTGCC
CGACAATGCTAAGGTGGAACAGGTTAAGGCCAGCATGGAGAATGGTGTGC
TCACAGTCACCGTTCCTAAACAGGAGGAGAAGAAACCTGAAGTAAGGCTA
TTGAGATCTCTGGCTAGTGATACTGTAATGTTTTCAGATAGTGTCTTTGT
TGCTATAATTTGTACGAAGCAAGCCCTGGTGTTG
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