CX294359

Overview
NameCX294359
Unique NameCX294359
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length584
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294359 vs. ExPASy Swiss-Prot
Match: HSP11_SOLPE (17.7 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 1.938e-46
Identity = 100/153 (65.36%), Postives = 121/153 (79.08%), Query Frame = 3
Query:   42 MSLIPSIFGGRRTNVLY-PVSLYVWDPFHWFLSSAVTNAPSSATETSHVANA*IDWIETPQARVFKADLPGLMKEELYVEVD*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTVPKQEEKKPEVR 497
            MSLIP IFG RR++ ++ P S+ V+DPF   L    TN+     ETS  AN  IDW ETP+A VFKADLPGL  EE+ VEV+  R+LQISGER+ E+E+KNDKW RVERSSGKF+RRFRLP+NAK++QVKASMENGVLTVTVPK+E KKP+V+
Sbjct:    1 MSLIPRIFGDRRSSSMFDPFSIDVFDPFRE-LGFPGTNSG----ETSAFANTRIDWKETPEAHVFKADLPGLKLEEVKVEVEEDRVLQISGERNMEKEDKNDKWQRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEMKKPDVK 148          
BLAST of CX294359 vs. ExPASy Swiss-Prot
Match: HS16A_ORYSJ (16.9 kDa class I heat shock protein 1 OS=Oryza sativa subsp. japonica GN=HSP16.9A PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 2.532e-46
Identity = 93/144 (64.58%), Postives = 114/144 (79.17%), Query Frame = 3
Query:   72 RRTNVLYPVSLYVWDPFHWFLSSAVTNAPSSATETSHVANA*IDWIETPQARVFKADLPGLMKEELYVEVD*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTVPKQEEKKPEVRLL 503
            RR+NV  P SL +WDPF     S V    +S  +T+  ANA IDW ETP++ VFKADLPG+ KEE+ VEV+ G +L ISG+RSKE+E+KNDKWHRVERSSG+F+RRFRLP+NAKV+QVKA +ENGVLTVTVPK E KKPEV+ +
Sbjct:    5 RRSNVFDPFSLDLWDPFDSVFRSVVP--ATSDNDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGLENGVLTVTVPKAEVKKPEVKAI 146          
BLAST of CX294359 vs. ExPASy Swiss-Prot
Match: HS177_ORYSJ (17.7 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 9.621e-46
Identity = 95/152 (62.50%), Postives = 114/152 (75.00%), Query Frame = 3
Query:   72 RRTNVLYPVSLYVWDPFHWF-------LSSAVTNAPSSATETSHVANA*IDWIETPQARVFKADLPGLMKEELYVEVD*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTVPKQEEKKPEVRLLR 506
            RR N   P SL +WDP   F        SS+ +  P + ++ +  A A IDW ETP+  VFKAD+PGL KEE+ VEVD G ILQISGERS+EQEEK+DKWHRVERSSGKFLRRFRLP+N K EQ+KASMENGVLTVTVPK+E KKP+V+ ++
Sbjct:    5 RRGNAFDPFSLDLWDPVDGFPFGSGGSSSSSGSLFPRANSDAAAFAGARIDWKETPEVHVFKADVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPEQIKASMENGVLTVTVPKEEPKKPDVKSIQ 156          
BLAST of CX294359 vs. ExPASy Swiss-Prot
Match: HS17B_ARATH (17.6 kDa class I heat shock protein 2 OS=Arabidopsis thaliana GN=HSP17.6B PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 3.656e-45
Identity = 92/156 (58.97%), Postives = 117/156 (75.00%), Query Frame = 3
Query:   42 MSLIPSIFGG-RRTNVLYPVSLYVWDPFHWFLSSAVTNAPSSATETSHVANA*IDWIETPQARVFKADLPGLMKEELYVEVD*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTVPKQEEKKPEVRLLR 506
            MS+IPS F   RR+N+  P SL VWDPF    SS+++       E S + NA +DW ETP+A VFKADLPGL KEE+ VE++   +L+ISGER  E+E+KND WHRVERSSG+F RRFRLP+N K++QVKA+MENGVLTVTVPK E KK +V+ ++
Sbjct:    1 MSMIPSFFNNNRRSNIFDPFSLDVWDPFKELTSSSLSR------ENSAIVNARVDWRETPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENVKMDQVKAAMENGVLTVTVPKAETKKADVKSIQ 150          
BLAST of CX294359 vs. ExPASy Swiss-Prot
Match: HS16C_ORYSJ (16.9 kDa class I heat shock protein 3 OS=Oryza sativa subsp. japonica GN=HSP16.9C PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 8.144e-45
Identity = 92/144 (63.89%), Postives = 114/144 (79.17%), Query Frame = 3
Query:   72 RRTNVLYPVSLYVWDPFHWFLSSAVTNAPSSATETSHVANA*IDWIETPQARVFKADLPGLMKEELYVEVD*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTVPKQEEKKPEVRLL 503
            RR+NV  P + + WDPF     S V    +S  +T+  ANA +DW ETP++ VFKADLPG+ KEE+ VEV+ G +L ISG+RSKE+E+KNDKWHRVERSSG+F+RRFRLP+NAKV+QVKASMENGVLTVTVPK E KKPEV+ +
Sbjct:    5 RRSNVFDPFADF-WDPFDGVFRSLVP--ATSDRDTAAFANARVDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKASMENGVLTVTVPKAEVKKPEVKAI 145          
BLAST of CX294359 vs. ExPASy Swiss-Prot
Match: HSP11_MEDSA (18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.370e-44
Identity = 89/136 (65.44%), Postives = 110/136 (80.88%), Query Frame = 3
Query:   93 PVSLYVWDPFHWF-LSSAVTNAPSSATETSHVANA*IDWIETPQARVFKADLPGLMKEELYVEVD*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTVPKQEEKKPEVR 497
            P SL VWDPF  F  +++  +A S   E S   +  IDW ETP+A VFKADLPGL KEE+ VE++  R+LQISGER+ E+E+KND+WHRVERSSGKF+RRFRLP+NAK++QVKA+MENGVLTVTVPK+E KKPEV+
Sbjct:    2 PFSLDVWDPFKDFPFTNSALSASSFPQENSAFVSTRIDWKETPEAHVFKADLPGLKKEEVKVEIEDDRVLQISGERNVEKEDKNDQWHRVERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPKEEIKKPEVK 137          
BLAST of CX294359 vs. ExPASy Swiss-Prot
Match: HS16A_WHEAT (16.9 kDa class I heat shock protein 1 OS=Triticum aestivum GN=hsp16.9A PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.006e-43
Identity = 89/144 (61.81%), Postives = 111/144 (77.08%), Query Frame = 3
Query:   72 RRTNVLYPVSLYVWDPFHWFLSSAVTNAPSSATETSHVANA*IDWIETPQARVFKADLPGLMKEELYVEVD*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTVPKQEEKKPEVRLL 503
            RR+NV  P +    DPF  F  S V      ++ET+  ANA +DW ETP+A VFK DLPG+ KEE+ VEV+ G +L +SGERS+E+E+KNDKWHRVERSSGKF+RRFRLP++AKVE+VKA +ENGVLTVTVPK E KKPEV+ +
Sbjct:    5 RRSNVFDPFADLWADPFDTF-RSIVPAISGGSSETAAFANARVDWKETPEAHVFKVDLPGVKKEEVKVEVEDGNVLVVSGERSREKEDKNDKWHRVERSSGKFVRRFRLPEDAKVEEVKAGLENGVLTVTVPKAEVKKPEVKAI 147          
BLAST of CX294359 vs. ExPASy Swiss-Prot
Match: HS16B_WHEAT (16.9 kDa class I heat shock protein 2 OS=Triticum aestivum GN=hsp16.9B PE=1 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 5.837e-43
Identity = 90/145 (62.07%), Postives = 111/145 (76.55%), Query Frame = 3
Query:   72 RRTNVLYPVSLYVWDPFHWFLSSAVTNAPSSATETSHVANA*IDWIETPQARVFKADLPGLMKEELYVEVD*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTVPKQEEKKPEVRLLR 506
            RRTNV  P +    DPF  F  S V       +ET+  ANA +DW ETP+A VFKADLPG+ KEE+ VEV+ G +L +SGER+KE+E+KNDKWHRVERSSGKF+RRFRL ++AKVE+VKA +ENGVLTVTVPK E KKPEV+ ++
Sbjct:    5 RRTNVFDPFADLWADPFDTF-RSIVPAISGGGSETAAFANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAGLENGVLTVTVPKAEVKKPEVKAIQ 148          
BLAST of CX294359 vs. ExPASy Swiss-Prot
Match: HS178_ARATH (17.8 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.8 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 8.428e-42
Identity = 92/156 (58.97%), Postives = 115/156 (73.72%), Query Frame = 3
Query:   42 MSLIPSIFGG-RRTNVLY-PVSLYVWDPFHWFLSSAVTNAPSSAT-ETSHVANA*IDWIETPQARVFKADLPGLMKEELYVEVD*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTVPKQEEKKPEVRL 500
            MSLIPS FG  RR+N ++ P SL VWDPF           PSS + ETS + NA +DW ET +A VFKADLPG+ KEE+ VE++   +L+ISGER  E+EEK D WHRVERSSG+F R+F+LP+N K++QVKASMENGVLTVTVPK EE K + ++
Sbjct:    1 MSLIPSFFGNNRRSNSIFDPFSLDVWDPFKEL------QFPSSLSGETSAITNARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENVKMDQVKASMENGVLTVTVPKVEEAKKKAQV 150          
BLAST of CX294359 vs. ExPASy Swiss-Prot
Match: HS17A_ARATH (17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana GN=HSP17.6A PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 9.318e-41
Identity = 90/156 (57.69%), Postives = 110/156 (70.51%), Query Frame = 3
Query:   42 MSLIPSIFGGRR---TNVLYPVSLYVWDPFHWFLSSAVTNAPSSATETSHVANA*IDWIETPQARVFKADLPGLMKEELYVEVD*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTVPKQEEKKPEVRL 500
            MSLIPS FG  R    N+  P SL VWDPF           PSS++  S +ANA +DW ET +A VFKADLPG+ KEE+ VE++   +L+ISGER  E+EEK D WHRVERSSG F R+FRLP+N K++QVKASMENGVLTVTVPK E  K + ++
Sbjct:    1 MSLIPSFFGNNRRINNNIFDPFSLDVWDPFKEL------QFPSSSS--SAIANARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGGFSRKFRLPENVKMDQVKASMENGVLTVTVPKVETNKKKAQV 148          
The following BLAST results are available for this feature:
BLAST of CX294359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
HSP11_SOLPE1.938e-4665.3617.7 kDa class I heat shock protein OS=Solanum per... [more]
HS16A_ORYSJ2.532e-4664.5816.9 kDa class I heat shock protein 1 OS=Oryza sat... [more]
HS177_ORYSJ9.621e-4662.5017.7 kDa class I heat shock protein OS=Oryza sativ... [more]
HS17B_ARATH3.656e-4558.9717.6 kDa class I heat shock protein 2 OS=Arabidops... [more]
HS16C_ORYSJ8.144e-4563.8916.9 kDa class I heat shock protein 3 OS=Oryza sat... [more]
HSP11_MEDSA2.370e-4465.4418.1 kDa class I heat shock protein (Fragment) OS=... [more]
HS16A_WHEAT2.006e-4361.8116.9 kDa class I heat shock protein 1 OS=Triticum ... [more]
HS16B_WHEAT5.837e-4362.0716.9 kDa class I heat shock protein 2 OS=Triticum ... [more]
HS178_ARATH8.428e-4258.9717.8 kDa class I heat shock protein OS=Arabidopsis... [more]
HS17A_ARATH9.318e-4157.6917.6 kDa class I heat shock protein 1 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionC05015F10SK FlavSen1 Citrus clementina cDNA clone C05015F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294359 ID=CX294359; Name=CX294359; organism=Citrus clementina; type=EST; length=584bp
GAAGTTGTTGAGCATTTAATTACCGTGCCCACTTTGCCATAATGTCACTC
ATTCCAAGCATCTTCGGTGGCCGAAGAACCAACGTGCTCTATCCAGTTTC
ATTATATGTATGGGATCCTTTCCACTGGTTCTTGTCCTCGGCCGTTACCA
ACGCGCCGTCTTCTGCTACGGAAACATCCCATGTCGCCAATGCTTGAATT
GACTGGATAGAGACTCCTCAGGCTCGCGTATTCAAAGCTGATCTTCCAGG
GCTGATGAAAGAAGAATTATACGTTGAGGTTGATTAGGGCAGGATTCTGC
AAATAAGCGGAGAGAGGAGCAAGGAGCAGGAAGAGAAGAATGACAAGTGG
CATCGCGTCGAGAGGAGCAGTGGCAAGTTCCTGAGGAGGTTCAGGTTGCC
CGACAATGCTAAGGTGGAACAGGTTAAGGCCAGCATGGAGAATGGTGTGC
TCACAGTCACCGTTCCTAAACAGGAGGAGAAGAAACCTGAAGTAAGGCTA
TTGAGATCTCTGGCTAGTGATACTGTAATGTTTTCAGATAGTGTCTTTGT
TGCTATAATTTGTACGAAGCAAGCCCTGGTGTTG
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