CX294359

Overview
NameCX294359
Unique NameCX294359
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length584
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294359 vs. ExPASy Swiss-Prot
Match: HSP21_SOLPE (17.3 kDa class II heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.891e-17
Identity = 50/119 (42.02%), Postives = 73/119 (61.34%), Query Frame = 3
Query:  150 NAPSS--ATETSHVANA*IDWIETPQARVFKADLPGLMKEELYVEVD*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTV---PKQEEKKPE 491
            NAPS     +   +A    D  E P + VF  D+PGL   ++ V+V+   +L ISGER +E+E++  K+ R+ER  GKF+R+F LP+NA  + + A  ++GVLTVTV   P  E KKP+
Sbjct:   30 NAPSKIYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEEDNVLLISGERKREEEKEGAKFIRMERRVGKFMRKFSLPENANTDAISAVCQDGVLTVTVQKLPPPEPKKPK 148          
BLAST of CX294359 vs. ExPASy Swiss-Prot
Match: HS177_ARATH (17.7 kDa class II heat shock protein OS=Arabidopsis thaliana GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.891e-17
Identity = 49/120 (40.83%), Postives = 76/120 (63.33%), Query Frame = 3
Query:  150 NAPSSA--TETSHVANA*IDWIETPQARVFKADLPGLMKEELYVEVD*GRILQISGERSKEQEEKND-KWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTVPK---QEEKKPE 491
            N PS A   +   +A    D IE P A VF  D+PG+  +E+ V+++   +L +SG+R ++ +E    K+ R+ER  GKF+R+F+LPDNA +E++ A+  +GVL VT+PK    E KKP+
Sbjct:   30 NNPSRAYMRDAKAMAATPADVIEHPDAYVFAVDMPGIKGDEIQVQIENENVLVVSGKRQRDNKENEGVKFVRMERRMGKFMRKFQLPDNADLEKISAACNDGVLKVTIPKLPPPEPKKPK 149          
BLAST of CX294359 vs. ExPASy Swiss-Prot
Match: HSP22_MAIZE (17.8 kDa class II heat shock protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.225e-17
Identity = 54/123 (43.90%), Postives = 74/123 (60.16%), Query Frame = 3
Query:  147 TNAPSSATET-----SHVANA*IDWIETPQARVFKADLPGLMKEELYVEVD*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTV---PKQEEKKPE 491
            T +  SAT T       +A    D  E P A  F  D+PGL   ++ V+V+  R+L +SGER +E+ E + K+ R+ER  GKF+R+F LPDNA V++V A   +GVLTVTV   P  E KKP+
Sbjct:   35 TGSGGSATRTYVRDARAMAATPADVKELPGAYAFVVDMPGLGTGDIRVQVEDERVLVVSGERRREEREDDAKYLRMERRMGKFMRKFVLPDNADVDKVAAVCRDGVLTVTVEKLPPPEPKKPK 157          
BLAST of CX294359 vs. ExPASy Swiss-Prot
Match: HS178_ORYSJ (17.8 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.8 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 3.225e-17
Identity = 50/115 (43.48%), Postives = 74/115 (64.35%), Query Frame = 3
Query:  198 IDWIETPQARVFKADLPGLMKEELYVEVD*GRILQI--------------SGERSKEQEEKND--KWHRVERSSGK---FLRRFRLPDNAKVEQVKASMENGVLTVTVPKQEEKK 485
            +DW ETP A VF+ DLPGL K+++ VEV  G IL++              +G+ S E+EE+ND  +WH  ER++G+    + +FRLP++A  ++  A M +GVLTVTVPK++ KK
Sbjct:   29 MDWRETPVAHVFEMDLPGLAKDQVAVEVVDGHILRVRAGGEHEDANNAAKAGKASGEEEEENDGVRWHCRERAAGRRRAAVTQFRLPEDAAADEASARMADGVLTVTVPKRKGKK 143          
BLAST of CX294359 vs. ExPASy Swiss-Prot
Match: HSP16_ORYSJ (16.0 kDa heat shock protein, peroxisomal OS=Oryza sativa subsp. japonica GN=HSP16.0 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.601e-16
Identity = 44/102 (43.14%), Postives = 66/102 (64.71%), Query Frame = 3
Query:  186 ANA*IDWIETPQARVFKADLPGLMKEELYVEVD*GRILQISGER-----SKEQE-EKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTVPKQ 473
            A A +DW+ETP + V + ++PGL K+++ V+V+ G +L + G        KE+E EK+  WH  ER   +F R   LP   +VEQ++AS++NGVLTV VPK+
Sbjct:   28 ATAAMDWVETPTSHVLRINVPGLGKDDVKVQVEDGNVLTVRGAAPHAAAEKEREREKDVVWHVAERGRPEFAREVALPAEVRVEQIRASVDNGVLTVVVPKE 129          
BLAST of CX294359 vs. ExPASy Swiss-Prot
Match: HSP21_IPONI (17.2 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-1 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.566e-16
Identity = 53/123 (43.09%), Postives = 74/123 (60.16%), Query Frame = 3
Query:  138 SAVTNAPSSA--TETSHVANA*IDWIETPQARVFKADLPGLMKEELYVEVD*GRILQISGERSKEQEEKND-KWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT---VPKQEEKKP 488
            S+ ++APS     +   +A    D  E P + VF  D+PGL   ++ V+VD   +L ISGER +E EEK   K+ R+ER  GK +R+F LP+NA  E++ A  ++GVLTVT   VP  E KKP
Sbjct:   25 SSNSSAPSRTFMLDAKAMAATPADVKEYPNSYVFIIDMPGLKSGDIKVQVDGDNVLSISGERKREAEEKEGAKYVRMERRVGKLMRKFVLPENANKEKITAVCQDGVLTVTVENVPPPEPKKP 147          
BLAST of CX294359 vs. ExPASy Swiss-Prot
Match: HSP21_HELAN (17.9 kDa class II heat shock protein OS=Helianthus annuus GN=HSP17.9 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.566e-16
Identity = 51/149 (34.23%), Postives = 84/149 (56.38%), Query Frame = 3
Query:   99 SLYVWDPF----HWFLSSAVTNAPSSATETSHVANA*I-----------DWIETPQARVFKADLPGLMKEELYVEVD*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTV---PKQEEKKPE 491
            SL  +DP     H+ L +   N   + +  S  + A +           D  E P + VF  D+PGL   ++ V+V+   +L ISG+R++E+E++  K+ R+ER  GKF+++F LP++A  +++ A  ++GVLTVTV   P  E KKP+
Sbjct:    5 SLMGFDPLLRNLHYILEATDDNTTGNKSNNSGPSRAYVRDARAMAATPADVKECPNSYVFIVDMPGLKSGDIKVQVERDNVLVISGKRNREEEKEGVKYVRMERRMGKFMKKFALPEDANTDKISAICQDGVLTVTVEKLPPPEPKKPK 153          
BLAST of CX294359 vs. ExPASy Swiss-Prot
Match: HSP21_PEA (17.1 kDa class II heat shock protein OS=Pisum sativum GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.657e-16
Identity = 47/119 (39.50%), Postives = 73/119 (61.34%), Query Frame = 3
Query:  150 NAPSSA--TETSHVANA*IDWIETPQARVFKADLPGLMKEELYVEVD*GRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTV---PKQEEKKPE 491
            NAP+     +   +A    D  E P + VF  D+PG+   ++ V+V+   +L ISGER +E+E++  K+ ++ER  GK +R+F LP+NA +E + A  ++GVLTVTV   P  E KKP+
Sbjct:   27 NAPTRTYVRDAKAMAATPADVKEHPNSYVFMVDMPGVKSGDIKVQVEDENVLLISGERKREEEKEGVKYLKMERRIGKLMRKFVLPENANIEAISAISQDGVLTVTVNKLPPPEPKKPK 145          
BLAST of CX294359 vs. ExPASy Swiss-Prot
Match: HSP18_ORYSJ (18.0 kDa class II heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.0 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.657e-16
Identity = 46/101 (45.54%), Postives = 68/101 (67.33%), Query Frame = 3
Query:  210 ETPQARVFKADLPGLMKEELYVEVD*GRILQISGERSK----EQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTV---PKQEEKKPE 491
            + P A  F  D+PGL   ++ V+V+  R+L ISGER +    E++E++ K+ R+ER  GKF+R+F LPDNA V+++ A  ++GVLTVTV   P  E KKP+
Sbjct:   59 DLPGAYAFVVDMPGLKSSDIKVQVEEERLLVISGERRRGGGEEEKEESCKYLRMERRMGKFMRKFVLPDNADVDKISAVCQDGVLTVTVEKLPPPEPKKPK 159          
BLAST of CX294359 vs. ExPASy Swiss-Prot
Match: HS176_ARATH (17.6 kDa class II heat shock protein OS=Arabidopsis thaliana GN=HSP17.6 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.082e-16
Identity = 44/101 (43.56%), Postives = 66/101 (65.35%), Query Frame = 3
Query:  201 DWIETPQARVFKADLPGLMKEELYVEVD*GRILQISGERSKEQEEKND-KWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTV---PKQEEKKPE 491
            D IE P A  F  D+PG+  +E+ V+V+   +L +SGER +E +E    K+ R+ER  GKF+R+F+LP+NA ++++ A   +GVL VTV   P  E KKP+
Sbjct:   48 DVIEHPNAYAFVVDMPGIKGDEIKVQVENDNVLVVSGERQRENKENEGVKYVRMERRMGKFMRKFQLPENADLDKISAVCHDGVLKVTVQKLPPPEPKKPK 148          
The following BLAST results are available for this feature:
BLAST of CX294359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
HSP21_SOLPE1.891e-1742.0217.3 kDa class II heat shock protein OS=Solanum pe... [more]
HS177_ARATH1.891e-1740.8317.7 kDa class II heat shock protein OS=Arabidopsi... [more]
HSP22_MAIZE3.225e-1743.9017.8 kDa class II heat shock protein OS=Zea mays P... [more]
HS178_ORYSJ3.225e-1743.4817.8 kDa heat shock protein OS=Oryza sativa subsp.... [more]
HSP16_ORYSJ1.601e-1643.1416.0 kDa heat shock protein, peroxisomal OS=Oryza ... [more]
HSP21_IPONI3.566e-1643.0917.2 kDa class II heat shock protein OS=Ipomoea ni... [more]
HSP21_HELAN3.566e-1634.2317.9 kDa class II heat shock protein OS=Helianthus... [more]
HSP21_PEA4.657e-1639.5017.1 kDa class II heat shock protein OS=Pisum sati... [more]
HSP18_ORYSJ4.657e-1645.5418.0 kDa class II heat shock protein OS=Oryza sati... [more]
HS176_ARATH6.082e-1643.5617.6 kDa class II heat shock protein OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionC05015F10SK FlavSen1 Citrus clementina cDNA clone C05015F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294359 ID=CX294359; Name=CX294359; organism=Citrus clementina; type=EST; length=584bp
GAAGTTGTTGAGCATTTAATTACCGTGCCCACTTTGCCATAATGTCACTC
ATTCCAAGCATCTTCGGTGGCCGAAGAACCAACGTGCTCTATCCAGTTTC
ATTATATGTATGGGATCCTTTCCACTGGTTCTTGTCCTCGGCCGTTACCA
ACGCGCCGTCTTCTGCTACGGAAACATCCCATGTCGCCAATGCTTGAATT
GACTGGATAGAGACTCCTCAGGCTCGCGTATTCAAAGCTGATCTTCCAGG
GCTGATGAAAGAAGAATTATACGTTGAGGTTGATTAGGGCAGGATTCTGC
AAATAAGCGGAGAGAGGAGCAAGGAGCAGGAAGAGAAGAATGACAAGTGG
CATCGCGTCGAGAGGAGCAGTGGCAAGTTCCTGAGGAGGTTCAGGTTGCC
CGACAATGCTAAGGTGGAACAGGTTAAGGCCAGCATGGAGAATGGTGTGC
TCACAGTCACCGTTCCTAAACAGGAGGAGAAGAAACCTGAAGTAAGGCTA
TTGAGATCTCTGGCTAGTGATACTGTAATGTTTTCAGATAGTGTCTTTGT
TGCTATAATTTGTACGAAGCAAGCCCTGGTGTTG
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