CX294364

Overview
NameCX294364
Unique NameCX294364
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length585
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294364 vs. ExPASy Swiss-Prot
Match: SAP11_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 11 OS=Oryza sativa subsp. japonica GN=SAP11 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.498e-14
Identity = 48/136 (35.29%), Postives = 66/136 (48.53%), Query Frame = 3
Query:  177 KMAEEHRCQAPR--LCVNNCGFFGSPTTQNLCSKCFRDLQLKAQQSSSAKHALN-------------QTLISSSSVDLSLR-ERPATDXXXXXXXXXXXXXXXXXXQSTAANRCMTCRRRVGLTGFKCRCGSVFCG 536
            K+ E    +AP   LC N+CGF G+P T NLC  CF      +  SS+A                  Q + SS++  ++L  ERP                     +S++ NRC +CRRRVGLTGF+CRCG ++CG
Sbjct:    7 KVEEPTELRAPEMTLCANSCGFPGNPATNNLCQNCFLAASASSSSSSAAASPSTTSLPVFPVVEKPRQAVQSSAAAAVALVVERPTAGPVESSSKAS---------RSSSVNRCHSCRRRVGLTGFRCRCGELYCG 133          
BLAST of CX294364 vs. ExPASy Swiss-Prot
Match: SAP3_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Oryza sativa subsp. japonica GN=SAP3 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 3.337e-14
Identity = 46/139 (33.09%), Postives = 70/139 (50.36%), Query Frame = 3
Query:  156 ENIVYR---LKMAEEHRCQA--PRLCVNNCGFFGSPTTQNLCSKCFRDLQL-----KAQQSSSAKHALNQTLISSSSVDLSLRERPATDXXXXXXXXXXXXXXXXXXQSTA-ANRCMTCRRRVGLTGFKCRCGSVFCGT 539
            E IV R   +KM+ E +  A  P LC + CGF+G+P T ++CS C+R   L      A   SS+  A +   +++ +V       P+ +                  +  A ANRC +C+++VGL GF CRCG+ +CGT
Sbjct:  180 ETIVLRANIIKMSSEQQASAGQPVLCASGCGFYGNPATLDMCSVCYRQHCLLNGATMATGPSSSVAAASAATVATGAVTSDSCSVPSAEVNGAAFSSKNNPEPATVVEKKAPANRCASCKKKVGLLGFACRCGATYCGT 318          
BLAST of CX294364 vs. ExPASy Swiss-Prot
Match: SAP7_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 7 OS=Oryza sativa subsp. japonica GN=SAP7 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.359e-14
Identity = 44/127 (34.65%), Postives = 60/127 (47.24%), Query Frame = 3
Query:  213 LCVNNCGFFGSPTTQNLCSKCFR-----------------DLQLKAQQSSSAKHALNQTLI--SSSSVDLSLRERPATDXXXXXXXXXXXXXXXXXXQSTAANRCMTCRRRVGLTGFKCRCGSVFCG 536
            +CV  CGFFGS  T N+CS+C+R                 DL+L     ++ K A    ++  + +S   +  E+PA                     +TA NRC  CR++VGLTGFKCRCG  FCG
Sbjct:   23 MCVTGCGFFGSEATNNMCSRCYREHSADNDAVEEAAAANSDLELVGVAETTTKKARMSAVVPVAVASSSSAAAEQPAAKA------------------ATAPNRCAACRKKVGLTGFKCRCGGNFCG 131          
BLAST of CX294364 vs. ExPASy Swiss-Prot
Match: SAP1_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Oryza sativa subsp. japonica GN=SAP1 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 4.359e-14
Identity = 46/125 (36.80%), Postives = 58/125 (46.40%), Query Frame = 3
Query:  189 EHRCQAPRLCVNNCGFFGSPTTQNLCSKCFRDLQLKAQQSSSAKHALNQTLISSSSVDLSLRERPATDXXXXXXXXXXXXXXXXXXQST---------AANRCMTCRRRVGLTGFKCRCGSVFCG 536
            E R     LC N+CGF G+P TQNLC  CF    L A  S+S+  +L+  ++           RPA                     +T         A NRC  CR+RVGLTGF+CRCG +FCG
Sbjct:   13 ELRAPEITLCANSCGFPGNPATQNLCQNCF----LAATASTSSPSSLSSPVLDKQP------PRPAAPLVEPQAPLPPPVEEMASALATAPAPVAKTSAVNRCSRCRKRVGLTGFRCRCGHLFCG 127          
BLAST of CX294364 vs. ExPASy Swiss-Prot
Match: SAP1_ORYSI (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Oryza sativa subsp. indica GN=SAP1 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.359e-14
Identity = 46/125 (36.80%), Postives = 58/125 (46.40%), Query Frame = 3
Query:  189 EHRCQAPRLCVNNCGFFGSPTTQNLCSKCFRDLQLKAQQSSSAKHALNQTLISSSSVDLSLRERPATDXXXXXXXXXXXXXXXXXXQST---------AANRCMTCRRRVGLTGFKCRCGSVFCG 536
            E R     LC N+CGF G+P TQNLC  CF    L A  S+S+  +L+  ++           RPA                     +T         A NRC  CR+RVGLTGF+CRCG +FCG
Sbjct:   13 ELRAPEITLCANSCGFPGNPATQNLCQNCF----LAATASTSSPSSLSSPVLDKQP------PRPAAPLVEPQAPLPPPVEEMASALATAPAPVAKTSAVNRCSRCRKRVGLTGFRCRCGHLFCG 127          
BLAST of CX294364 vs. ExPASy Swiss-Prot
Match: SAP5_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 5 OS=Arabidopsis thaliana GN=SAP5 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.402e-12
Identity = 39/119 (32.77%), Postives = 56/119 (47.06%), Query Frame = 3
Query:  177 KMAEEHRCQAPRLCVNNCGFFGSPTTQNLCSKCFRDLQLKAQQSSSAKHALNQTLISSSSVDLSLRERPATDXXXXXXXXXXXXXXXXXXQSTAANRCMTCRRRVGLTGFKCRCGSVFC 533
            K+ E        LC NNCG   +P T N+C KCF      +  S++A    + +++  S+  ++LR  PA                         NRC  CR++VGLTGF+CRCG +FC
Sbjct:   13 KVLETLTTTTTTLCTNNCGVTANPATNNMCQKCFN----ASLVSAAAGVVESGSILKRSARSVNLRSSPAK-----VVIRPREIDAVKKRDQQIVNRCSGCRKKVGLTGFRCRCGELFC 122          
BLAST of CX294364 vs. ExPASy Swiss-Prot
Match: SAP10_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 10 OS=Oryza sativa subsp. japonica GN=SAP10 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.328e-12
Identity = 38/111 (34.23%), Postives = 49/111 (44.14%), Query Frame = 3
Query:  213 LCVNNCGFFGSPTTQNLCSKCFRDLQLKAQQSSSAKHALNQTLISSSSVDLSLRERPATDXXXXXXXXXXXXXXXXXXQST---AANRCMTCRRRVGLTGFKCRCGSVFCG 536
            +C   CGFFGS  T  LCSKC++      QQ    +H +      S    L +    +T                    +T   A NRC  CR++VGL GF CRCG +FCG
Sbjct:   17 MCAAGCGFFGSAATDGLCSKCYK------QQQPQPRHLIGTAAGDSDKTSLKVVADLSTLVIKDNSGVGGEGTTVMAPPATVTKAKNRCKACRKKVGLLGFPCRCGGMFCG 121          
The following BLAST results are available for this feature:
BLAST of CX294364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
SAP11_ORYSJ1.498e-1435.29Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP3_ORYSJ3.337e-1433.09Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP7_ORYSJ4.359e-1434.65Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP1_ORYSJ4.359e-1436.80Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP1_ORYSI4.359e-1436.80Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP5_ARATH1.402e-1232.77Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP10_ORYSJ5.328e-1234.23Zinc finger A20 and AN1 domain-containing stress-a... [more]

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Properties
Property NameValue
Genbank descriptionC05015G05SK FlavSen1 Citrus clementina cDNA clone C05015G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294364 ID=CX294364; Name=CX294364; organism=Citrus clementina; type=EST; length=585bp
GGGCTGCAGGCCTCGTGCCGTCTTTCTTTCTTTCTTTCTTTCTTTCTTAC
CAAAATCCCAATTACCAAACAGAAGACAAAGGCTAATCCTCCTTATATAT
TTCCTTTCCAGTCGTCCCTTTTTGAAAAATCAATCAATTTCAGCAAATTA
TTCCTGAAAATATTGTTTACAGGTTGAAGATGGCGGAAGAGCACAGATGT
CAAGCACCCCGTTTGTGCGTGAACAACTGCGGATTTTTCGGGAGCCCAAC
AACTCAAAATCTCTGCTCCAAATGTTTTCGCGATCTTCAGTTGAAAGCAC
AACAATCTTCCTCGGCCAAACACGCCCTTAACCAAACCCTGATTTCGTCG
TCGTCGGTTGATTTGTCTCTGCGCGAGAGACCGGCGACGGACGTGGAGGT
AGCGGCAGAGGCGGAGAAGCCGCCGGCTGAGGTGGCCGCTCCGGTGCAGT
CGACGGCGGCGAACAGGTGCATGACTTGCAGGAGGCGCGTGGGGCTCACG
GGGTTCAAGTGCAGGTGCGGGTCGGTGTTCTGCGGGACCACAGGTACCCG
GAGCGCACGCGTGTTCGTTCATTCAAGAGATGGCA
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