CX294368

Overview
NameCX294368
Unique NameCX294368
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length426
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_ACAM1 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Acaryochloris marina (strain MBIC 11017) GN=hemL PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 4.569e-48
Identity = 85/128 (66.41%), Postives = 107/128 (83.59%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV AYGGRRDIM MVAPAGPMYQAGTLSGNPLAMTAGI TL+ L+  GTY+ L+++TG+L  G++   ++AGH +CGG+I+GMFG FF  GPV++++DAK +D  KFA+ +RGMLE+GVY APSQF
Sbjct:  277 GLPVGAYGGRRDIMSMVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRRSGTYDQLDRVTGKLISGLLQIAREAGHEVCGGHINGMFGMFFAPGPVHSYDDAKAADAAKFAKFHRGMLEQGVYLAPSQF 404          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_SYNY3 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Synechocystis sp. (strain PCC 6803) GN=hemL PE=3 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 7.794e-48
Identity = 89/128 (69.53%), Postives = 104/128 (81.25%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV AYGGR +IM MVAPAGPMYQAGTLSGNPLAMTAGI TL+ L++PG+YEYL+KIT  L  G++ A + AGH +CGG IS MFG FF  GPV N+EDAK +DT KFAR +RGMLE G+Y APSQ+
Sbjct:  278 GLPVGAYGGREEIMAMVAPAGPMYQAGTLSGNPLAMTAGIKTLEILQKPGSYEYLDKITKRLVDGLLAAAQDAGHEVCGGSISAMFGIFFAPGPVRNYEDAKLADTNKFARFHRGMLERGIYLAPSQY 405          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_TRIEI (Glutamate-1-semialdehyde 2,1-aminomutase OS=Trichodesmium erythraeum (strain IMS101) GN=hemL PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 1.329e-47
Identity = 88/128 (68.75%), Postives = 106/128 (82.81%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV AYGGR+DIM MVAPAGPMYQAGTLSGNPLAMTAGI TL+ LK+PGTY+ LNKIT  L  G+++  K+  + I GG+IS MFG FF +GPV+N++DAKKSD TKF++ +RGMLE G+Y APSQF
Sbjct:  277 GLPVGAYGGRQDIMSMVAPAGPMYQAGTLSGNPLAMTAGIKTLELLKKPGTYDQLNKITKRLADGLLNIAKETNNDIWGGHISAMFGIFFNKGPVHNYDDAKKSDLTKFSKFHRGMLEHGIYLAPSQF 404          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_CYAP7 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Cyanothece sp. (strain PCC 7424) GN=hemL PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 3.868e-47
Identity = 87/128 (67.97%), Postives = 106/128 (82.81%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV AYGGR++IM +VAP+GPMYQAGTLSGNPLAMTAGI TL+ L++PGTY+YL++IT +L  G++   K+AGH + GG ISGMFG FFT   V+N+EDAKKSDT KF R +RGMLE G+Y APSQF
Sbjct:  278 GLPVGAYGGRKEIMSLVAPSGPMYQAGTLSGNPLAMTAGIKTLELLQKPGTYDYLDRITKKLINGLLTLAKEAGHEVYGGSISGMFGLFFTGEAVHNYEDAKKSDTAKFGRFHRGMLERGIYLAPSQF 405          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_CHLRE (Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic OS=Chlamydomonas reinhardtii GN=GSA PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 1.625e-45
Identity = 88/128 (68.75%), Postives = 102/128 (79.69%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            G+PV AYGG+++IM+MVAPAGPMYQAGTLSGNP+AMTAGI TL+ L  PG YE+L K+T  L  GI+ A K+  H I GG ISGMFGFFF +GPV  FEDA  +DT KFAR +RGMLEEGVY APSQF
Sbjct:  308 GMPVGAYGGKKEIMKMVAPAGPMYQAGTLSGNPMAMTAGIKTLEILGRPGAYEHLEKVTKRLIDGIMAAAKEHSHEITGGNISGMFGFFFCKGPVTCFEDALAADTAKFARFHRGMLEEGVYLAPSQF 435          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_SYNP2 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=hemL PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 2.772e-45
Identity = 87/128 (67.97%), Postives = 101/128 (78.91%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV AYGGR+DIM MVAPAGPMYQAGTLSGNPLAMTAGI TL+ L+ PG Y  L  IT +L  G++   ++AGH + GG ISGMFG FFT  PV N+EDAKKSD  KF+R +RGMLE+G+Y APSQF
Sbjct:  277 GLPVGAYGGRKDIMSMVAPAGPMYQAGTLSGNPLAMTAGIKTLELLQRPGMYGQLETITKKLIDGLLSIAREAGHEVTGGNISGMFGMFFTGEPVRNYEDAKKSDLHKFSRYHRGMLEQGIYLAPSQF 404          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_SYNR3 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Synechococcus sp. (strain RCC307) GN=hemL PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 6.176e-45
Identity = 87/128 (67.97%), Postives = 100/128 (78.12%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV AYGGR+DIMEMVAPAGPMYQAGTLSGNPLAMTAGI TL+ LK PGTYE L   T  L +GI +A K AG  +CG  IS MFGFF  +GPV NFE+AK +D+ +FA+++R MLE GVY APS F
Sbjct:  278 GLPVGAYGGRKDIMEMVAPAGPMYQAGTLSGNPLAMTAGIKTLELLKRPGTYEKLEATTKRLAEGIQEAAKAAGLPVCGNSISAMFGFFLCDGPVRNFEEAKANDSERFAKLHRAMLERGVYLAPSSF 405          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_SYNS3 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Synechococcus sp. (strain CC9311) GN=hemL PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 1.376e-44
Identity = 86/128 (67.19%), Postives = 101/128 (78.91%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV AYGGR++IMEMVAPAGPMYQAGTLSGNPLAMTAGI TL+ LK+PG+YE L   T  L QGI+DAG++AG  I GG +  MFGFF  EGPV NFE+AK +D+ +F  ++R MLE GVY APS F
Sbjct:  282 GLPVGAYGGRKEIMEMVAPAGPMYQAGTLSGNPLAMTAGIKTLELLKQPGSYEKLTATTERLIQGILDAGREAGLPITGGSVGAMFGFFLCEGPVRNFEEAKATDSVRFGLLHRAMLERGVYLAPSAF 409          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_GLOVI (Glutamate-1-semialdehyde 2,1-aminomutase OS=Gloeobacter violaceus GN=hemL PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 1.797e-44
Identity = 86/128 (67.19%), Postives = 99/128 (77.34%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV AY GRR+IM+MVAPAGPMYQAGTLSGNPLAMTAGI TL+ L+ PGTYE L  ++  L  G++ A ++AGHA  G  +  MF  FFTEGPV NF DAK+SD  KFAR +RGMLE GVY APSQF
Sbjct:  277 GLPVGAYAGRREIMQMVAPAGPMYQAGTLSGNPLAMTAGIKTLEILQRPGTYERLEGLSARLADGLLAAAREAGHAATGNRVGAMFTLFFTEGPVRNFADAKRSDLQKFARFHRGMLERGVYLAPSQF 404          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_SYNPW (Glutamate-1-semialdehyde 2,1-aminomutase OS=Synechococcus sp. (strain WH7803) GN=hemL PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 4.426e-43
Identity = 85/128 (66.41%), Postives = 98/128 (76.56%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV AYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGI TL+ L++PGTYE L   T +L  GI +A   AG  I GG +S MFGFF  EGPV NFE+AK +D  +F +++R ML+ GVY APS F
Sbjct:  277 GLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEKLTATTEKLIAGIKEAASAAGLPITGGSVSAMFGFFLCEGPVRNFEEAKATDAERFGKLHRAMLQRGVYLAPSAF 404          
The following BLAST results are available for this feature:
BLAST of CX294368 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GSA_ACAM14.569e-4866.41Glutamate-1-semialdehyde 2,1-aminomutase OS=Acaryo... [more]
GSA_SYNY37.794e-4869.53Glutamate-1-semialdehyde 2,1-aminomutase OS=Synech... [more]
GSA_TRIEI1.329e-4768.75Glutamate-1-semialdehyde 2,1-aminomutase OS=Tricho... [more]
GSA_CYAP73.868e-4767.97Glutamate-1-semialdehyde 2,1-aminomutase OS=Cyanot... [more]
GSA_CHLRE1.625e-4568.75Glutamate-1-semialdehyde 2,1-aminomutase, chloropl... [more]
GSA_SYNP22.772e-4567.97Glutamate-1-semialdehyde 2,1-aminomutase OS=Synech... [more]
GSA_SYNR36.176e-4567.97Glutamate-1-semialdehyde 2,1-aminomutase OS=Synech... [more]
GSA_SYNS31.376e-4467.19Glutamate-1-semialdehyde 2,1-aminomutase OS=Synech... [more]
GSA_GLOVI1.797e-4467.19Glutamate-1-semialdehyde 2,1-aminomutase OS=Gloeob... [more]
GSA_SYNPW4.426e-4366.41Glutamate-1-semialdehyde 2,1-aminomutase OS=Synech... [more]

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Properties
Property NameValue
Genbank descriptionC05015G12SK FlavSen1 Citrus clementina cDNA clone C05015G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294368 ID=CX294368; Name=CX294368; organism=Citrus clementina; type=EST; length=426bp
TTCGGCACGAGGGGCTGCCAGTTCGTGCTTATGGAGGAAGAAGGGATATT
ATGGAGATGGTGGCACCGGCAGGCCCAATGTACCAGGCTGGGACCTTAAG
TGGGAATCCATTGGCAATGACCGCTGGGATACACACCCTTAAACGATTGA
AGGAGCCAGGAACTTATGAATACTTGAATAAGATCACAGGTGAACTTACT
CAAGGCATCATTGATGCTGGAAAGAAAGCTGGGCATGCCATTTGTGGAGG
GTATATAAGTGGGATGTTTGGATTTTTCTTTACCGAAGGGCCTGTTTACA
ACTTCGAGGATGCAAAGAAGAGTGATACCACAAAGTTTGCAAGAATTTAC
AGGGGAATGCTGGAGGAAGGTGTATACTTCGCACCTTCACAGTTTAGAGG
CTGGGTTCACAAGCTTGGCACAATCA
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