CX294368

Overview
NameCX294368
Unique NameCX294368
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length426
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_SYNSC (Glutamate-1-semialdehyde 2,1-aminomutase OS=Synechococcus sp. (strain CC9605) GN=hemL PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 3.747e-42
Identity = 84/128 (65.62%), Postives = 97/128 (75.78%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV AYGGR DIM MVAPAGPMYQAGTLSGNPLAMTAGI TL+ LK+PGTYE L   T +L  GI DA + AG +I    +S MFGFF  EGPV NFE+AK +D+ +F +++R MLE GVY APS F
Sbjct:  272 GLPVGAYGGRADIMGMVAPAGPMYQAGTLSGNPLAMTAGIKTLELLKQPGTYEKLTATTQKLVAGIKDAAQSAGMSITAASVSAMFGFFLCEGPVRNFEEAKATDSERFGKLHRAMLEHGVYLAPSAF 399          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_SYNS9 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Synechococcus sp. (strain CC9902) GN=hemL PE=3 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 3.747e-42
Identity = 84/128 (65.62%), Postives = 97/128 (75.78%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV AYGGR DIM+MV+PAGPMYQAGTLSGNPLAMTAGI TL+ LK+PGTYE L   T  L  GI  A  +AG  I GG +S MFGFF  EGPV NFE+AK +D+ +F R++R MLE GVY APS +
Sbjct:  272 GLPVGAYGGRADIMQMVSPAGPMYQAGTLSGNPLAMTAGIKTLELLKQPGTYEKLAATTERLISGIKTAAGEAGFPITGGSVSAMFGFFLCEGPVRNFEEAKATDSERFGRLHRAMLERGVYLAPSAY 399          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_SYNPX (Glutamate-1-semialdehyde 2,1-aminomutase OS=Synechococcus sp. (strain WH8102) GN=hemL PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 8.346e-42
Identity = 84/128 (65.62%), Postives = 96/128 (75.00%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV AYGGR DIM MVAPAGPMYQAGTLSGNPLAMTAGI TL+ LK+PG+YE L   T +L  GI +A   AG    GG +S MFGFF  EGPV NFEDAK +D+ +F +++R MLE GVY APS F
Sbjct:  272 GLPVGAYGGRADIMGMVAPAGPMYQAGTLSGNPLAMTAGIKTLELLKQPGSYEKLTATTEKLIAGIKEAATAAGLPFTGGSVSAMFGFFLCEGPVRNFEDAKATDSERFGKLHRAMLERGVYLAPSAF 399          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_PROM4 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochlorococcus marinus (strain MIT 9211) GN=hemL PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 8.346e-42
Identity = 80/128 (62.50%), Postives = 100/128 (78.12%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV AYGGR++IM MVAPAGPMYQAGTLSGNPLAMTAGI TL+ LK+ GTYE L  ++  L  GI ++ KKAG  I G +ISGMFGF+  EGPV NF++AK+++   F +++R MLE+G+Y APS F
Sbjct:  276 GLPVGAYGGRKEIMSMVAPAGPMYQAGTLSGNPLAMTAGIKTLELLKQEGTYERLESLSQRLINGICESAKKAGIPITGSFISGMFGFYLCEGPVRNFQEAKQTNAELFGKLHRAMLEKGIYLAPSAF 403          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_PROMM (Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochlorococcus marinus (strain MIT 9313) GN=hemL PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 1.424e-41
Identity = 84/128 (65.62%), Postives = 95/128 (74.22%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV AYGGR +IMEMVAPAGPMYQAGTLSGNPLAMTAGI TL+ LK+ GTYE L   T  L +GI++A K A   I G  I  MFGFF  EGPV NFEDAK +DT  F +++R MLE G+Y APS F
Sbjct:  272 GLPVGAYGGRAEIMEMVAPAGPMYQAGTLSGNPLAMTAGIKTLELLKQEGTYERLESTTERLIKGILEAAKAAEVPITGNSIGAMFGFFLCEGPVRNFEDAKATDTELFGKLHRAMLERGIYLAPSAF 399          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_PROM3 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochlorococcus marinus (strain MIT 9303) GN=hemL PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 2.428e-41
Identity = 83/128 (64.84%), Postives = 94/128 (73.44%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV AYGGR +IMEMVAPAGPMYQAGTLSGNPLAMTAGI TL+ LK+ GTYE L   T  L  GI++A K A   I G  I  MFGFF  EGPV NFEDAK +D  +F +++R MLE G+Y APS F
Sbjct:  272 GLPVGAYGGRAEIMEMVAPAGPMYQAGTLSGNPLAMTAGIKTLELLKQEGTYERLESTTERLINGILEAAKAAEVPITGNSIGAMFGFFLCEGPVRNFEDAKATDAERFGKLHRAMLERGIYLAPSAF 399          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_PROMA (Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochlorococcus marinus GN=hemL PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 3.172e-41
Identity = 82/128 (64.06%), Postives = 99/128 (77.34%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV AYGGR+DIM MVAPAGPMYQAGTLSGNPLAMTAGI TL+ L++ GTYE L  IT  L  GI ++ K+AG  I G  ISGMFGF+  EGPV NFE+AK++++  F +++R ML +GVY APS F
Sbjct:  276 GLPVGAYGGRKDIMSMVAPAGPMYQAGTLSGNPLAMTAGIKTLEILQQEGTYERLASITNRLINGICESAKQAGIPITGSSISGMFGFYLCEGPVRNFEEAKQTNSDYFGKLHRAMLAKGVYLAPSAF 403          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_PROMT (Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochlorococcus marinus (strain NATL2A) GN=hemL PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 2.056e-40
Identity = 82/128 (64.06%), Postives = 99/128 (77.34%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV AYGGR++IM MV+P+GPMYQAGTLSGNPLAMTAGI TL+ LK+ GTYE L  IT +L  GI+ A K++   I G  IS MFGF+  EGPV NFE+AK SDT  F++I+R ML++GVY APS F
Sbjct:  276 GLPVGAYGGRKEIMSMVSPSGPMYQAGTLSGNPLAMTAGIKTLELLKQEGTYEKLEAITKKLLDGILTAAKESNIPIYGQSISAMFGFYLCEGPVRNFEEAKSSDTELFSKIHRLMLQKGVYLAPSAF 403          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_PROM1 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochlorococcus marinus (strain NATL1A) GN=hemL PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 3.507e-40
Identity = 81/128 (63.28%), Postives = 99/128 (77.34%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV AYGGR++IM MV+P+GPMYQAGTLSGNPLAMTAGI TL+ LK+ GTYE L  +T +L  GI+ A K++   I G  IS MFGF+  EGPV NFE+AK SDT  F++I+R ML++GVY APS F
Sbjct:  272 GLPVGAYGGRKEIMSMVSPSGPMYQAGTLSGNPLAMTAGIKTLELLKQEGTYEKLEALTKKLLDGILTAAKESNIPIYGQSISAMFGFYLCEGPVRNFEEAKSSDTELFSKIHRLMLQKGVYLAPSAF 399          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_PROM9 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochlorococcus marinus (strain MIT 9312) GN=hemL PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 1.020e-39
Identity = 78/128 (60.94%), Postives = 97/128 (75.78%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV AYGG+++IM MVAP+GP+YQAGTLSGNPLAMTAGI TL+ LK+ GTYE L+ IT  L +GII + +  G AI GG +S MFGFF  +GPV NF++AK +D   F +++R ML  GVY APS F
Sbjct:  276 GLPVGAYGGKKEIMSMVAPSGPVYQAGTLSGNPLAMTAGIKTLELLKQEGTYEKLDAITSRLIEGIIQSAENNGIAIYGGSVSAMFGFFLCDGPVRNFDEAKTNDAKLFGKLHREMLRRGVYLAPSPF 403          
The following BLAST results are available for this feature:
BLAST of CX294368 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GSA_SYNSC3.747e-4265.63Glutamate-1-semialdehyde 2,1-aminomutase OS=Synech... [more]
GSA_SYNS93.747e-4265.63Glutamate-1-semialdehyde 2,1-aminomutase OS=Synech... [more]
GSA_SYNPX8.346e-4265.63Glutamate-1-semialdehyde 2,1-aminomutase OS=Synech... [more]
GSA_PROM48.346e-4262.50Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochl... [more]
GSA_PROMM1.424e-4165.63Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochl... [more]
GSA_PROM32.428e-4164.84Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochl... [more]
GSA_PROMA3.172e-4164.06Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochl... [more]
GSA_PROMT2.056e-4064.06Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochl... [more]
GSA_PROM13.507e-4063.28Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochl... [more]
GSA_PROM91.020e-3960.94Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochl... [more]

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Properties
Property NameValue
Genbank descriptionC05015G12SK FlavSen1 Citrus clementina cDNA clone C05015G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294368 ID=CX294368; Name=CX294368; organism=Citrus clementina; type=EST; length=426bp
TTCGGCACGAGGGGCTGCCAGTTCGTGCTTATGGAGGAAGAAGGGATATT
ATGGAGATGGTGGCACCGGCAGGCCCAATGTACCAGGCTGGGACCTTAAG
TGGGAATCCATTGGCAATGACCGCTGGGATACACACCCTTAAACGATTGA
AGGAGCCAGGAACTTATGAATACTTGAATAAGATCACAGGTGAACTTACT
CAAGGCATCATTGATGCTGGAAAGAAAGCTGGGCATGCCATTTGTGGAGG
GTATATAAGTGGGATGTTTGGATTTTTCTTTACCGAAGGGCCTGTTTACA
ACTTCGAGGATGCAAAGAAGAGTGATACCACAAAGTTTGCAAGAATTTAC
AGGGGAATGCTGGAGGAAGGTGTATACTTCGCACCTTCACAGTTTAGAGG
CTGGGTTCACAAGCTTGGCACAATCA
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