CX294368

Overview
NameCX294368
Unique NameCX294368
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length426
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_PROM2 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochlorococcus marinus (strain MIT 9215) GN=hemL PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 1.333e-39
Identity = 77/128 (60.16%), Postives = 99/128 (77.34%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV AYGG+++IM MVAP+GP+YQAGTLSGNPLAMTAGI TL+ LK+ GTY+ L+  T  L +GII + +  G AI GG ISGMFGFF  +GPV NFE+AK +++  F +++R ML+ G+Y APS F
Sbjct:  276 GLPVGAYGGKKEIMSMVAPSGPVYQAGTLSGNPLAMTAGIKTLELLKQDGTYDKLDSTTSRLIEGIIQSAENNGIAINGGSISGMFGFFLCDGPVRNFEEAKTNNSELFGKLHREMLQRGIYLAPSPF 403          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_PROMP (Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=hemL PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 2.273e-39
Identity = 78/128 (60.94%), Postives = 97/128 (75.78%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV AYGG+++IM MVAP+GP+YQAGTLSGNPLAMTAGI TL+ LK+ GTYE L   T  L +GII + +  G AI GG +S MFGFF  EGPV NFE+AK +++  F +++R ML+ GVY APS F
Sbjct:  276 GLPVGAYGGKKEIMSMVAPSGPVYQAGTLSGNPLAMTAGIKTLELLKQEGTYEKLESTTSRLIEGIIQSAENNGIAINGGSVSAMFGFFLCEGPVRNFEEAKTNNSELFGKLHREMLKRGVYLAPSPF 403          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_PROM0 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochlorococcus marinus (strain MIT 9301) GN=hemL PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 3.877e-39
Identity = 76/128 (59.38%), Postives = 96/128 (75.00%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV AYGG+++IM MVAPAGP+YQAGTLSGNPLAMTAGI TL+ LK+ GTY+ L+ +T  L +GII + +  G AI GG +S MFGFF  +GPV NF +AK +D   F +++R ML  G+Y APS F
Sbjct:  276 GLPVGAYGGKKEIMSMVAPAGPVYQAGTLSGNPLAMTAGIKTLELLKQEGTYDKLDSLTSRLIEGIIQSAENNGIAINGGSVSAMFGFFLCDGPVRNFNEAKTNDAELFGKLHREMLRRGIYLAPSPF 403          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_PROM5 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochlorococcus marinus (strain MIT 9515) GN=hemL PE=3 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 1.128e-38
Identity = 76/128 (59.38%), Postives = 97/128 (75.78%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV AYGGR++IM MVAP+GP+YQAGTLSGNPLAMTAGI TL+ LK+ GTYE +   T  L +GI+ + +  G AI GG +S MFGFF  EGPV NFE+AK +++  F +++R M++ GVY APS F
Sbjct:  276 GLPVGAYGGRKEIMSMVAPSGPVYQAGTLSGNPLAMTAGIKTLELLKQEGTYEKMGLATSRLIEGIMQSAENNGIAINGGSVSAMFGFFLCEGPVRNFEEAKTNNSELFGKLHREMIKRGVYLAPSPF 403          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_PROMS (Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochlorococcus marinus (strain AS9601) GN=hemL PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.924e-38
Identity = 75/128 (58.59%), Postives = 96/128 (75.00%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV AYGG+++IM MVAP+GP+YQAGTLSGNPLAMTAGI TL+ LK+ GTY+ L+ IT  L +GII + +  G AI GG +S MFGFF  +GPV NF +AK +D   F ++++ ML  G+Y APS F
Sbjct:  276 GLPVGAYGGKKEIMSMVAPSGPVYQAGTLSGNPLAMTAGIKTLELLKQDGTYDKLDLITSRLIEGIIQSAENNGIAINGGSVSAMFGFFLCDGPVRNFNEAKTNDAELFGKLHKEMLRRGIYLAPSPF 403          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_ROSCS (Glutamate-1-semialdehyde 2,1-aminomutase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=hemL PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 4.436e-35
Identity = 68/128 (53.12%), Postives = 89/128 (69.53%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLP  AYGGRRD+ME++APAGP+YQAGTLSGNPLAM AG  TL+ ++ PG +E L +    L  G   A  +A  A+   Y   M+GFFFT+ PV ++  AKKSDT ++A+ +  MLE G+Y AP+QF
Sbjct:  272 GLPAAAYGGRRDLMELIAPAGPVYQAGTLSGNPLAMAAGAATLRAIRAPGVFEQLERAAAMLCSGFEHAAAEADIALRTAYAGSMWGFFFTDEPVVDYVSAKKSDTQRYAQFFHAMLERGIYLAPAQF 399          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_MOOTA (Glutamate-1-semialdehyde 2,1-aminomutase OS=Moorella thermoacetica (strain ATCC 39073) GN=hemL PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 4.436e-35
Identity = 71/128 (55.47%), Postives = 91/128 (71.09%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV AYGGRR+IME VAP+GP+YQAGTLSGNPLA++AG+ TLK LK+PGTYE L  ++  L +G+ +A  +AG  +    +  MF  FF  GPV ++  A  SDT  FA  +R ML +G+Y APSQF
Sbjct:  277 GLPVGAYGGRREIMERVAPSGPIYQAGTLSGNPLAVSAGLATLKVLKKPGTYERLESLSARLEKGLKEAAAEAGVPVTFNRVGAMFTTFFNPGPVTDYATATASDTRAFAAFFRAMLRQGIYLAPSQF 404          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_DESAH (Glutamate-1-semialdehyde 2,1-aminomutase OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=hemL PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 7.567e-35
Identity = 71/128 (55.47%), Postives = 88/128 (68.75%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV AYGGRR+IM+ +APAGP+YQAGTLSGNPLAM AGI TL+ LK+ G YE L+  T  L  G+  A +KAG      ++  M G FFT   V NF++AK SD   F++ Y GM + G+Y APSQF
Sbjct:  272 GLPVGAYGGRREIMDQIAPAGPVYQAGTLSGNPLAMAAGIATLEALKKTGFYESLDAKTERLVTGLRTAAEKAGIDFTASHVGSMAGMFFTRATVTNFDEAKTSDLVNFSKFYTGMRDRGIYLAPSQF 399          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_DESRM (Glutamate-1-semialdehyde 2,1-aminomutase OS=Desulfotomaculum reducens (strain MI-1) GN=hemL PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 1.686e-34
Identity = 72/128 (56.25%), Postives = 92/128 (71.88%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV AYGGRR+IM+MV+PAGP+YQAGTLSGNPLAMTAGI TLK+L++PG YE L+  +  L QG+I A K AG       +  +   FFT+  V +F  A  SDT ++A  +R MLE+G+Y AP+QF
Sbjct:  274 GLPVGAYGGRREIMQMVSPAGPVYQAGTLSGNPLAMTAGIATLKQLQQPGVYEELDYKSDLLAQGLIQAAKAAGVEASFNRVQSLQTCFFTQQDVRDFATASSSDTKQYAAFFRNMLEQGIYLAPAQF 401          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_DESAA (Glutamate-1-semialdehyde 2,1-aminomutase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=hemL PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 2.202e-34
Identity = 70/131 (53.44%), Postives = 86/131 (65.65%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQFRGW 404
            GLPV AYGG+R +ME +AP+GP+YQAGTLSGNP+AM AGI TLK +  PG YE L K +  L  G+  A   AG       +  M   FF+ GPV NFEDAKK D  +F++ Y+GM  EGV+  PSQF  W
Sbjct:  270 GLPVGAYGGKRSLMEKIAPSGPVYQAGTLSGNPMAMAAGIATLKEISAPGFYEALEKSSQTLADGLKKAAADAGVEAVISRVGSMQTLFFSAGPVENFEDAKKCDLDRFSKFYQGMRAEGVFLPPSQFEAW 400          
The following BLAST results are available for this feature:
BLAST of CX294368 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GSA_PROM21.333e-3960.16Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochl... [more]
GSA_PROMP2.273e-3960.94Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochl... [more]
GSA_PROM03.877e-3959.38Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochl... [more]
GSA_PROM51.128e-3859.38Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochl... [more]
GSA_PROMS1.924e-3858.59Glutamate-1-semialdehyde 2,1-aminomutase OS=Prochl... [more]
GSA_ROSCS4.436e-3553.13Glutamate-1-semialdehyde 2,1-aminomutase OS=Roseif... [more]
GSA_MOOTA4.436e-3555.47Glutamate-1-semialdehyde 2,1-aminomutase OS=Moorel... [more]
GSA_DESAH7.567e-3555.47Glutamate-1-semialdehyde 2,1-aminomutase OS=Desulf... [more]
GSA_DESRM1.686e-3456.25Glutamate-1-semialdehyde 2,1-aminomutase OS=Desulf... [more]
GSA_DESAA2.202e-3453.44Glutamate-1-semialdehyde 2,1-aminomutase OS=Desulf... [more]

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Properties
Property NameValue
Genbank descriptionC05015G12SK FlavSen1 Citrus clementina cDNA clone C05015G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294368 ID=CX294368; Name=CX294368; organism=Citrus clementina; type=EST; length=426bp
TTCGGCACGAGGGGCTGCCAGTTCGTGCTTATGGAGGAAGAAGGGATATT
ATGGAGATGGTGGCACCGGCAGGCCCAATGTACCAGGCTGGGACCTTAAG
TGGGAATCCATTGGCAATGACCGCTGGGATACACACCCTTAAACGATTGA
AGGAGCCAGGAACTTATGAATACTTGAATAAGATCACAGGTGAACTTACT
CAAGGCATCATTGATGCTGGAAAGAAAGCTGGGCATGCCATTTGTGGAGG
GTATATAAGTGGGATGTTTGGATTTTTCTTTACCGAAGGGCCTGTTTACA
ACTTCGAGGATGCAAAGAAGAGTGATACCACAAAGTTTGCAAGAATTTAC
AGGGGAATGCTGGAGGAAGGTGTATACTTCGCACCTTCACAGTTTAGAGG
CTGGGTTCACAAGCTTGGCACAATCA
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