CX294368

Overview
NameCX294368
Unique NameCX294368
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length426
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_HAMD5 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) GN=hemL PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.095e-25
Identity = 57/129 (44.19%), Postives = 83/129 (64.34%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG-PVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            G+PV A+GGR+++M ++AP GP+YQA TLSG+PL M AG   L  L  PG ++ L ++T  L   +  A ++    +   ++ GMFGFFFT+   V  +ED KK +  +F R +  ML+EG+YFAPS F
Sbjct:  270 GMPVAAFGGRKEVMSILAPLGPVYQAETLSGHPLGMAAGFACLTELARPGLHKKLTELTTLLVLNLKKAAQEHNIPLIINHLGGMFGFFFTDAKTVTCYEDVKKCNIERFKRFFYFMLKEGIYFAPSAF 398          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_FRATW (Glutamate-1-semialdehyde 2,1-aminomutase OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=hemL PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.095e-25
Identity = 58/130 (44.62%), Postives = 82/130 (63.08%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG--PVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            G+PV A+GGR++IM+ V+PAGP+YQAGTLSGNP+AMTAGI TL+++ +PG ++ L     +L  G+ +A K          + GMFG FF      V  F D  K++   F + +  ML+ GVY APS +
Sbjct:  274 GMPVGAFGGRKEIMQKVSPAGPVYQAGTLSGNPIAMTAGIKTLEKISQPGLFDELGAKAQKLVDGLNEAAKAYDFNFHAKCLGGMFGLFFCSDKIAVNTFVDLGKTNLKMFNQFFAYMLDNGVYLAPSAY 403          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_DIAST (Glutamate-1-semialdehyde 2,1-aminomutase OS=Diaphorobacter sp. (strain TPSY) GN=hemL PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.095e-25
Identity = 54/128 (42.19%), Postives = 77/128 (60.16%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            G+P+ A+GG R +ME +AP GP+YQAGTLSGNP+A   G+ TL+ + +PG Y+ L   T  L  G+  A   AG   CG    GMFGFF       N+ +   +D  +F  ++ G+L+ GVY AP+ +
Sbjct:  279 GMPLAAFGGSRAVMEQLAPLGPVYQAGTLSGNPVATACGLATLREIAKPGFYDALGARTRALIDGLAGAASAAGVPFCGDTQGGMFGFFLLPQLPQNYPEVLNTDGMRFNTLFHGLLDGGVYIAPALY 406          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_BURP6 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Burkholderia pseudomallei (strain 668) GN=hemL PE=3 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 1.095e-25
Identity = 58/128 (45.31%), Postives = 78/128 (60.94%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            G+P  A+GGR DIM  +AP G +YQAGTLSGNP+A+ AG+ TL+ ++ PG ++ L   T  L   +    + AG       I GMFG +FTE    +F D  KSD  +F R +  ML+ GVYFAPS +
Sbjct:  270 GMPAAAFGGRGDIMSHLAPLGGVYQAGTLSGNPVAVAAGLATLRLIQAPGFHDALADKTRRLADSLAAEARAAGVPFSADAIGGMFGLYFTEQVPASFADVTKSDIERFNRFFHLMLDAGVYFAPSAY 397          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA2_CLOPH (Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=hemL2 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.095e-25
Identity = 61/129 (47.29%), Postives = 81/129 (62.79%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            G+PV  YGGRR+IMEMVAP GP+YQAGTLSGNP+AM AG+  LK LKE P  Y  +N++       + +   K         +  +   FF +  V ++E AK +DT +FAR +R MLE G+Y AP+QF
Sbjct:  270 GMPVGCYGGRREIMEMVAPVGPVYQAGTLSGNPVAMAAGMAQLKYLKEHPEVYTKINELGEYFRNKVNELFDKYNIKYQVSGVGSLACIFFADSRVTDYETAKLADTKEFARYFRFMLEHGIYIAPAQF 398          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA1_BACWK (Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Bacillus weihenstephanensis (strain KBAB4) GN=hemL1 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.095e-25
Identity = 53/131 (40.46%), Postives = 83/131 (63.36%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQFRGW 404
            GLP+ AYGG+++IME VAP GP YQAGT++GNP +M +GI  L+ L++ G YE L+++   L +GI++   K    I    + G    +FT   + +++ AK +D   F R ++ ML+EG+  APS++  W
Sbjct:  273 GLPIGAYGGKKEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQKGVYEKLDELGAMLEKGILEQATKHNIDITVNRLKGALTVYFTTNTIEDYDAAKNTDGEMFGRFFKLMLQEGINLAPSKYEAW 403          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_VIBVY (Glutamate-1-semialdehyde 2,1-aminomutase OS=Vibrio vulnificus (strain YJ016) GN=hemL PE=3 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 1.430e-25
Identity = 58/129 (44.96%), Postives = 78/129 (60.47%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTE-GPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            G+PV A+GGR+++M+ +AP GP+YQAGTLSGNP+AM AG   L  L+E G  + L   T  L  G      + G  +    + GMFGFFFTE   +  +ED  K D  +F R +  M++ GVY APS F
Sbjct:  270 GMPVGAFGGRKEVMQYIAPTGPVYQAGTLSGNPVAMAAGYACLTLLREEGNEKRLASKTKHLADGFKSLAAQHGIPLVVNQVGGMFGFFFTEQEQITCYEDVTKCDLERFKRFFHLMIDHGVYLAPSAF 398          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_VIBVU (Glutamate-1-semialdehyde 2,1-aminomutase OS=Vibrio vulnificus GN=hemL PE=3 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 1.430e-25
Identity = 58/129 (44.96%), Postives = 78/129 (60.47%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTE-GPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            G+PV A+GGR+++M+ +AP GP+YQAGTLSGNP+AM AG   L  L+E G  + L   T  L  G      + G  +    + GMFGFFFTE   +  +ED  K D  +F R +  M++ GVY APS F
Sbjct:  270 GMPVGAFGGRKEVMQYIAPTGPVYQAGTLSGNPVAMAAGYACLTLLREEGNEKRLASKTKHLADGFKSLAAQHGIPLVVNQVGGMFGFFFTEQEQITCYEDVTKCDIERFKRFFHLMIDHGVYLAPSAF 398          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_FRATT (Glutamate-1-semialdehyde 2,1-aminomutase OS=Francisella tularensis subsp. tularensis GN=hemL PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.430e-25
Identity = 58/130 (44.62%), Postives = 82/130 (63.08%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG--PVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            G+PV A+GGR++IM+ V+PAGP+YQAGTLSGNP+AMTAGI TL+++ +PG ++ L     +L  G+ +A K          + GMFG FF      V  F D  K++   F + +  ML+ GVY APS +
Sbjct:  274 GMPVGAFGGRKEIMQKVSPAGPVYQAGTLSGNPIAMTAGIKTLEKISQPGFFDELGAKAQKLVDGLNEAAKAYDFNFHAKCLGGMFGLFFCSDKIAVNTFVDLGKTNLKMFNQFFAYMLDNGVYLAPSAY 403          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_FRATO (Glutamate-1-semialdehyde 2,1-aminomutase OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=hemL PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.430e-25
Identity = 58/130 (44.62%), Postives = 82/130 (63.08%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG--PVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            G+PV A+GGR++IM+ V+PAGP+YQAGTLSGNP+AMTAGI TL+++ +PG ++ L     +L  G+ +A K          + GMFG FF      V  F D  K++   F + +  ML+ GVY APS +
Sbjct:  274 GMPVGAFGGRKEIMQKVSPAGPVYQAGTLSGNPIAMTAGIKTLEKISQPGFFDELGAKAQKLVDGLNEAAKAYDFNFHAKCLGGMFGLFFCSDKIAVNTFVDLGKTNLKMFNQFFAYMLDNGVYLAPSAY 403          
The following BLAST results are available for this feature:
BLAST of CX294368 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GSA_HAMD51.095e-2544.19Glutamate-1-semialdehyde 2,1-aminomutase OS=Hamilt... [more]
GSA_FRATW1.095e-2544.62Glutamate-1-semialdehyde 2,1-aminomutase OS=Franci... [more]
GSA_DIAST1.095e-2542.19Glutamate-1-semialdehyde 2,1-aminomutase OS=Diapho... [more]
GSA_BURP61.095e-2545.31Glutamate-1-semialdehyde 2,1-aminomutase OS=Burkho... [more]
GSA2_CLOPH1.095e-2547.29Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Clos... [more]
GSA1_BACWK1.095e-2540.46Glutamate-1-semialdehyde 2,1-aminomutase 1 OS=Baci... [more]
GSA_VIBVY1.430e-2544.96Glutamate-1-semialdehyde 2,1-aminomutase OS=Vibrio... [more]
GSA_VIBVU1.430e-2544.96Glutamate-1-semialdehyde 2,1-aminomutase OS=Vibrio... [more]
GSA_FRATT1.430e-2544.62Glutamate-1-semialdehyde 2,1-aminomutase OS=Franci... [more]
GSA_FRATO1.430e-2544.62Glutamate-1-semialdehyde 2,1-aminomutase OS=Franci... [more]

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Properties
Property NameValue
Genbank descriptionC05015G12SK FlavSen1 Citrus clementina cDNA clone C05015G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294368 ID=CX294368; Name=CX294368; organism=Citrus clementina; type=EST; length=426bp
TTCGGCACGAGGGGCTGCCAGTTCGTGCTTATGGAGGAAGAAGGGATATT
ATGGAGATGGTGGCACCGGCAGGCCCAATGTACCAGGCTGGGACCTTAAG
TGGGAATCCATTGGCAATGACCGCTGGGATACACACCCTTAAACGATTGA
AGGAGCCAGGAACTTATGAATACTTGAATAAGATCACAGGTGAACTTACT
CAAGGCATCATTGATGCTGGAAAGAAAGCTGGGCATGCCATTTGTGGAGG
GTATATAAGTGGGATGTTTGGATTTTTCTTTACCGAAGGGCCTGTTTACA
ACTTCGAGGATGCAAAGAAGAGTGATACCACAAAGTTTGCAAGAATTTAC
AGGGGAATGCTGGAGGAAGGTGTATACTTCGCACCTTCACAGTTTAGAGG
CTGGGTTCACAAGCTTGGCACAATCA
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