CX294368

Overview
NameCX294368
Unique NameCX294368
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length426
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_XANAC (Glutamate-1-semialdehyde 2,1-aminomutase OS=Xanthomonas axonopodis pv. citri GN=hemL PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 9.250e-33
Identity = 66/128 (51.56%), Postives = 89/128 (69.53%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            G+PV AYGGRRD+ME VAPAGP+YQAGTLSGNP+AM AG+  L+ ++EPG +  L++ T  L +G+ DA + AG A+    + GMFG FFT+  V ++  A   D T F R +  ML++GVY APS +
Sbjct:  272 GMPVGAYGGRRDLMEQVAPAGPIYQAGTLSGNPVAMAAGLAMLELVQEPGFHTRLSEATSMLCEGLEDAARAAGIAVTTNQVGGMFGLFFTDDIVESYAQATACDITTFNRFFHAMLQQGVYLAPSAY 399          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_ENTS8 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=hemL PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 9.250e-33
Identity = 65/129 (50.39%), Postives = 90/129 (69.77%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG-PVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            G+PV A+GGRR++ME +AP GP+YQAGTLSGNP+AM AG   L  + +PG +  L+ +T +L +G++DA ++AG  +   ++ GMFGFFFT+   V  + D  K D  +F R +  MLEEGVYFAPS F
Sbjct:  270 GMPVGAFGGRREVMEALAPTGPVYQAGTLSGNPIAMAAGFACLSEVAQPGVHSTLDALTTQLAEGLLDAAQEAGVPLVVNHVGGMFGFFFTDADSVTCYHDVVKCDVERFKRFFHLMLEEGVYFAPSAF 398          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_CARHZ (Glutamate-1-semialdehyde 2,1-aminomutase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=hemL PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 9.250e-33
Identity = 72/128 (56.25%), Postives = 88/128 (68.75%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV AYGGRR+IMEMVAPAGP+YQAGTLSGNPLAMTAGI TL  LKE G YE L + +  L  G+ +A + AG  +    +  M   FFT   V +++ A  SDT KFA  ++ +LE G+Y APSQF
Sbjct:  274 GLPVGAYGGRREIMEMVAPAGPVYQAGTLSGNPLAMTAGIATLTVLKEEGVYEQLEEKSSYLESGLKEAARAAGLKLWFNRVGSMLCTFFTSEEVVDYKTACTSDTQKFAVFFKTLLENGIYIAPSQF 401          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_XANC5 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=hemL PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 1.208e-32
Identity = 66/128 (51.56%), Postives = 88/128 (68.75%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            G+PV AYGGRRD+ME VAPAGP+YQAGTLSGNP+AM AG+  L+ ++EPG +  L++ T  L +G+ DA + AG A+    + GMFG FFT+  V ++  A   D T F R +  ML+ GVY APS +
Sbjct:  272 GMPVGAYGGRRDLMEQVAPAGPIYQAGTLSGNPVAMAAGLAMLELVQEPGFHTRLSEATSMLCEGLEDAARAAGIAVTTNQVGGMFGLFFTDDIVESYAQATACDITSFNRFFHAMLQRGVYLAPSAY 399          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_NATTJ (Glutamate-1-semialdehyde 2,1-aminomutase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=hemL PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 1.208e-32
Identity = 67/128 (52.34%), Postives = 86/128 (67.19%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV AYGG+ +IME +APAG +YQAGTLSGNP+AM AGI TLK L++ G+Y+ L   +  L +G+     K G ++    +  M G +FTEGPV +FE A  SD  KF + +  ML EGVY APSQF
Sbjct:  272 GLPVGAYGGKEEIMEYIAPAGSIYQAGTLSGNPIAMRAGIETLKVLRQEGSYDQLESKSKHLAEGLAKVADKNGVSVTINRVGTMVGMYFTEGPVTDFESATSSDNDKFVKYFETMLSEGVYLAPSQF 399          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_XANOR (Glutamate-1-semialdehyde 2,1-aminomutase OS=Xanthomonas oryzae pv. oryzae GN=hemL PE=3 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 1.578e-32
Identity = 65/128 (50.78%), Postives = 88/128 (68.75%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            G+PV AYGGRRD+ME +APAGP+YQAGTLSGNP+AM AG+  L+ ++EPG +  L++ T  L +G+ DA + AG A+    + GMFG FFT+  V ++  A   D T F R +  ML+ GVY APS +
Sbjct:  272 GMPVGAYGGRRDLMEQIAPAGPIYQAGTLSGNPVAMAAGLAMLELVQEPGFHMRLSEATSALCEGLKDAARTAGIAVTTNQVGGMFGLFFTDDIVESYAQATACDITSFNRFFHAMLQRGVYLAPSAY 399          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_XANOP (Glutamate-1-semialdehyde 2,1-aminomutase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=hemL PE=3 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 1.578e-32
Identity = 65/128 (50.78%), Postives = 88/128 (68.75%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            G+PV AYGGRRD+ME +APAGP+YQAGTLSGNP+AM AG+  L+ ++EPG +  L++ T  L +G+ DA + AG A+    + GMFG FFT+  V ++  A   D T F R +  ML+ GVY APS +
Sbjct:  272 GMPVGAYGGRRDLMEQIAPAGPIYQAGTLSGNPVAMAAGLAMLELVQEPGFHMRLSEATSTLCEGLKDAARAAGIAVTTNQVGGMFGLFFTDDIVESYAQATACDITSFNRFFHAMLQRGVYLAPSAY 399          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_XANOM (Glutamate-1-semialdehyde 2,1-aminomutase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=hemL PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.578e-32
Identity = 65/128 (50.78%), Postives = 88/128 (68.75%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            G+PV AYGGRRD+ME +APAGP+YQAGTLSGNP+AM AG+  L+ ++EPG +  L++ T  L +G+ DA + AG A+    + GMFG FFT+  V ++  A   D T F R +  ML+ GVY APS +
Sbjct:  272 GMPVGAYGGRRDLMEQIAPAGPIYQAGTLSGNPVAMAAGLAMLELVQEPGFHMRLSEATSALCEGLKDAARTAGIAVTTNQVGGMFGLFFTDDIVESYAQATACDITSFNRFFHAMLQRGVYLAPSAY 399          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_PELPD (Glutamate-1-semialdehyde 2,1-aminomutase OS=Pelobacter propionicus (strain DSM 2379) GN=hemL PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 2.691e-32
Identity = 69/128 (53.91%), Postives = 89/128 (69.53%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV A+GGRR+IMEM++P+G +YQAGTLSGNPLAM+AGI TL  LK+PG YE L + +  L +GI DA + AG+ I    +  MF  FF+   VY++  A   DT  FA  ++ ML EG+Y APSQF
Sbjct:  272 GLPVGAFGGRREIMEMLSPSGSVYQAGTLSGNPLAMSAGIATLSLLKQPGFYESLEEKSRHLAEGITDAARLAGYPIQTTRVGSMFCAFFSGQEVYDWAGASGCDTAAFAAYFKAMLNEGIYLAPSQF 399          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_ACTSZ (Glutamate-1-semialdehyde 2,1-aminomutase OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=hemL PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 4.590e-32
Identity = 67/129 (51.94%), Postives = 86/129 (66.67%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGP-VYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            G+PV A+GG+R+IME +AP GP+YQAGTLSGNP+AM AG+  L  L +PG  + L + T +L +G+    KK G      Y+ GMFG FFT+ P V NF+D  K D  KF R +  MLE+GVY APS F
Sbjct:  270 GMPVGAFGGKREIMEYIAPTGPVYQAGTLSGNPIAMAAGLACLTELSKPGNEQQLAEKTQQLAEGLKTLAKKHGVPFIAQYVGGMFGLFFTDVPEVTNFQDVMKCDVAKFNRFFHLMLEQGVYLAPSAF 398          
The following BLAST results are available for this feature:
BLAST of CX294368 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GSA_XANAC9.250e-3351.56Glutamate-1-semialdehyde 2,1-aminomutase OS=Xantho... [more]
GSA_ENTS89.250e-3350.39Glutamate-1-semialdehyde 2,1-aminomutase OS=Entero... [more]
GSA_CARHZ9.250e-3356.25Glutamate-1-semialdehyde 2,1-aminomutase OS=Carbox... [more]
GSA_XANC51.208e-3251.56Glutamate-1-semialdehyde 2,1-aminomutase OS=Xantho... [more]
GSA_NATTJ1.208e-3252.34Glutamate-1-semialdehyde 2,1-aminomutase OS=Natran... [more]
GSA_XANOR1.578e-3250.78Glutamate-1-semialdehyde 2,1-aminomutase OS=Xantho... [more]
GSA_XANOP1.578e-3250.78Glutamate-1-semialdehyde 2,1-aminomutase OS=Xantho... [more]
GSA_XANOM1.578e-3250.78Glutamate-1-semialdehyde 2,1-aminomutase OS=Xantho... [more]
GSA_PELPD2.691e-3253.91Glutamate-1-semialdehyde 2,1-aminomutase OS=Peloba... [more]
GSA_ACTSZ4.590e-3251.94Glutamate-1-semialdehyde 2,1-aminomutase OS=Actino... [more]

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Properties
Property NameValue
Genbank descriptionC05015G12SK FlavSen1 Citrus clementina cDNA clone C05015G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294368 ID=CX294368; Name=CX294368; organism=Citrus clementina; type=EST; length=426bp
TTCGGCACGAGGGGCTGCCAGTTCGTGCTTATGGAGGAAGAAGGGATATT
ATGGAGATGGTGGCACCGGCAGGCCCAATGTACCAGGCTGGGACCTTAAG
TGGGAATCCATTGGCAATGACCGCTGGGATACACACCCTTAAACGATTGA
AGGAGCCAGGAACTTATGAATACTTGAATAAGATCACAGGTGAACTTACT
CAAGGCATCATTGATGCTGGAAAGAAAGCTGGGCATGCCATTTGTGGAGG
GTATATAAGTGGGATGTTTGGATTTTTCTTTACCGAAGGGCCTGTTTACA
ACTTCGAGGATGCAAAGAAGAGTGATACCACAAAGTTTGCAAGAATTTAC
AGGGGAATGCTGGAGGAAGGTGTATACTTCGCACCTTCACAGTTTAGAGG
CTGGGTTCACAAGCTTGGCACAATCA
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