CX294368

Overview
NameCX294368
Unique NameCX294368
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length426
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_XANCP (Glutamate-1-semialdehyde 2,1-aminomutase OS=Xanthomonas campestris pv. campestris GN=hemL PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 5.995e-32
Identity = 64/128 (50.00%), Postives = 88/128 (68.75%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            G+PV AYGG RD+ME ++PAGP+YQAGTLSGNP+AM AG+  L+ ++EPG +  L++ T  L +G+ DA + AG A+    + GMFG FFT+  V N+  A   D T F R +  ML++GVY APS +
Sbjct:  272 GMPVGAYGGGRDLMEQISPAGPIYQAGTLSGNPVAMAAGLAMLQLVQEPGFHARLSETTSLLCEGLEDAARAAGVAVTTNQVGGMFGLFFTDQIVENYAQATACDVTTFNRFFHAMLQQGVYLAPSAY 399          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_XANCB (Glutamate-1-semialdehyde 2,1-aminomutase OS=Xanthomonas campestris pv. campestris (strain B100) GN=hemL PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 5.995e-32
Identity = 64/128 (50.00%), Postives = 88/128 (68.75%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            G+PV AYGG RD+ME ++PAGP+YQAGTLSGNP+AM AG+  L+ ++EPG +  L++ T  L +G+ DA + AG A+    + GMFG FFT+  V N+  A   D T F R +  ML++GVY APS +
Sbjct:  272 GMPVGAYGGGRDLMEQISPAGPIYQAGTLSGNPVAMAAGLAMLQLVQEPGFHARLSETTSLLCEGLEDAARAAGVAVTTNQVGGMFGLFFTDQIVENYAQATACDVTTFNRFFHAMLQQGVYLAPSAY 399          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_XANC8 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=hemL PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 5.995e-32
Identity = 64/128 (50.00%), Postives = 88/128 (68.75%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            G+PV AYGG RD+ME ++PAGP+YQAGTLSGNP+AM AG+  L+ ++EPG +  L++ T  L +G+ DA + AG A+    + GMFG FFT+  V N+  A   D T F R +  ML++GVY APS +
Sbjct:  272 GMPVGAYGGGRDLMEQISPAGPIYQAGTLSGNPVAMAAGLAMLQLVQEPGFHARLSETTSLLCEGLEDAARAAGVAVTTNQVGGMFGLFFTDQIVENYAQATACDVTTFNRFFHAMLQQGVYLAPSAY 399          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_SALAR (Glutamate-1-semialdehyde 2,1-aminomutase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=hemL PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 5.995e-32
Identity = 64/129 (49.61%), Postives = 89/129 (68.99%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTE-GPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            G+PV A+GGRRD+M+ +AP GP+YQAGTLSGNP+AM AG   L  + +PG +E LNK+T  L +G+ +A ++AG  +   ++ GMFG FFT+ G V  ++D    D  +F R +  ML+EGVY APS F
Sbjct:  270 GMPVGAFGGRRDVMDALAPTGPVYQAGTLSGNPIAMAAGFACLNEVAQPGIHETLNKLTTRLAEGLREAAQEAGIPLVVNHVGGMFGIFFTDAGSVTCYQDVMACDVERFKRFFHLMLDEGVYLAPSAF 398          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_KLEP7 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=hemL PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 5.995e-32
Identity = 64/129 (49.61%), Postives = 88/129 (68.22%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG-PVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            G+PV A+GGRR++M+ +AP GP+YQAGTLSGNP+AM AG   L  + +PG +E L ++T +L QG++DA + AG  +    + GMFG FFT+   V  ++D  K D  +F R +  MLEEGVY APS F
Sbjct:  270 GMPVGAFGGRREVMDALAPTGPVYQAGTLSGNPIAMAAGFACLNEVAQPGVHETLTELTNQLAQGLLDAARDAGIPLVVNNVGGMFGIFFTDAETVTCYQDVVKCDVERFKRFFHLMLEEGVYLAPSAF 398          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_GEOLS (Glutamate-1-semialdehyde 2,1-aminomutase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=hemL PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 5.995e-32
Identity = 68/128 (53.12%), Postives = 91/128 (71.09%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV A+GG+R+IME ++P+G +YQAGTLSGNPLAMTAGI TLK L++PG Y+ L + + +L++GI  A + AG+ +    +  MF  FFT   V+++  A   DT  FAR +  MLEEGVY APSQF
Sbjct:  272 GLPVGAFGGKREIMEKLSPSGGVYQAGTLSGNPLAMTAGIETLKFLQQPGFYDRLEEKSSQLSEGISLAARDAGYPLYSTRVGSMFCAFFTPHEVFDWTTAAACDTKAFARYFLAMLEEGVYLAPSQF 399          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_HELMI (Glutamate-1-semialdehyde 2,1-aminomutase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=hemL PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.023e-31
Identity = 70/128 (54.69%), Postives = 85/128 (66.41%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV AYGG+ +IME V+PAGP+YQAGTLSGNPLAMTAGI TL+ LK PGTY  L++    L  G+  A +KAG  +    +  M   FFT+ PV +F  A  SDT  F   +R ML+ GVY A SQF
Sbjct:  274 GLPVGAYGGKAEIMEKVSPAGPIYQAGTLSGNPLAMTAGIITLEILKRPGTYAALDEKAAYLADGLAKAAEKAGVPVWTNRVGSMLTGFFTDRPVVDFASACTSDTAAFGTYFRAMLDRGVYLACSQF 401          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_DESOH (Glutamate-1-semialdehyde 2,1-aminomutase OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=hemL PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.336e-31
Identity = 67/128 (52.34%), Postives = 83/128 (64.84%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            G+PV AYGG R IM+ +AP G +YQAGTLSGNP+AM AGI TL  LK+PG YE L   T  L  G+  A   AG  +    +  M G FF + PV +F  AK SD ++FA  YR MLE+G++ APSQF
Sbjct:  272 GMPVGAYGGSRQIMKHIAPEGNIYQAGTLSGNPVAMAAGIATLSELKKPGVYEALEARTRRLADGLARAAADAGVPVQAHAVGAMLGLFFADRPVTDFASAKTSDLSRFAAYYRAMLEKGIFLAPSQF 399          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_SHEPW (Glutamate-1-semialdehyde 2,1-aminomutase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=hemL PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.744e-31
Identity = 66/129 (51.16%), Postives = 85/129 (65.89%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFT-EGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            G+PV A+GGR+D+M+ +AP GP+YQAGTLSGNP+AM+AG+  ++ L E G YE L   T  + +G   A  K G  +   Y+ GMFGFFFT E  V +FE   K D  KF   Y GML+EGVY APS +
Sbjct:  270 GMPVGAFGGRKDVMQFIAPTGPVYQAGTLSGNPIAMSAGLAQMEALCEDGVYEQLAAKTQYIAEGFKAAANKHGIPMAINYVGGMFGFFFTDEEKVTSFEQVTKCDAEKFPEFYHGMLDEGVYLAPSAY 398          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_PELTS (Glutamate-1-semialdehyde 2,1-aminomutase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=hemL PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 2.278e-31
Identity = 67/128 (52.34%), Postives = 85/128 (66.41%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV AYGGRR+IME VAP+GP+YQAGTLSGNPLA++AGI TL+ LK+PG Y  L +    L   +  A ++ G  +C      M   FFT   V ++  A  SDT ++A  +R MLE+GVY APSQF
Sbjct:  275 GLPVGAYGGRREIMEQVAPSGPVYQAGTLSGNPLAVSAGIATLEVLKQPGVYGRLEQTAAALEDALKQAARQTGAEVCFNRAGSMLCAFFTGEEVKDYASACTSDTARYAAFFRSMLEQGVYLAPSQF 402          
The following BLAST results are available for this feature:
BLAST of CX294368 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GSA_XANCP5.995e-3250.00Glutamate-1-semialdehyde 2,1-aminomutase OS=Xantho... [more]
GSA_XANCB5.995e-3250.00Glutamate-1-semialdehyde 2,1-aminomutase OS=Xantho... [more]
GSA_XANC85.995e-3250.00Glutamate-1-semialdehyde 2,1-aminomutase OS=Xantho... [more]
GSA_SALAR5.995e-3249.61Glutamate-1-semialdehyde 2,1-aminomutase OS=Salmon... [more]
GSA_KLEP75.995e-3249.61Glutamate-1-semialdehyde 2,1-aminomutase OS=Klebsi... [more]
GSA_GEOLS5.995e-3253.13Glutamate-1-semialdehyde 2,1-aminomutase OS=Geobac... [more]
GSA_HELMI1.023e-3154.69Glutamate-1-semialdehyde 2,1-aminomutase OS=Heliob... [more]
GSA_DESOH1.336e-3152.34Glutamate-1-semialdehyde 2,1-aminomutase OS=Desulf... [more]
GSA_SHEPW1.744e-3151.16Glutamate-1-semialdehyde 2,1-aminomutase OS=Shewan... [more]
GSA_PELTS2.278e-3152.34Glutamate-1-semialdehyde 2,1-aminomutase OS=Peloto... [more]

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Properties
Property NameValue
Genbank descriptionC05015G12SK FlavSen1 Citrus clementina cDNA clone C05015G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294368 ID=CX294368; Name=CX294368; organism=Citrus clementina; type=EST; length=426bp
TTCGGCACGAGGGGCTGCCAGTTCGTGCTTATGGAGGAAGAAGGGATATT
ATGGAGATGGTGGCACCGGCAGGCCCAATGTACCAGGCTGGGACCTTAAG
TGGGAATCCATTGGCAATGACCGCTGGGATACACACCCTTAAACGATTGA
AGGAGCCAGGAACTTATGAATACTTGAATAAGATCACAGGTGAACTTACT
CAAGGCATCATTGATGCTGGAAAGAAAGCTGGGCATGCCATTTGTGGAGG
GTATATAAGTGGGATGTTTGGATTTTTCTTTACCGAAGGGCCTGTTTACA
ACTTCGAGGATGCAAAGAAGAGTGATACCACAAAGTTTGCAAGAATTTAC
AGGGGAATGCTGGAGGAAGGTGTATACTTCGCACCTTCACAGTTTAGAGG
CTGGGTTCACAAGCTTGGCACAATCA
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