CX294578
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294578 vs. ExPASy Swiss-Prot
Match: SCPL3_CAEEL (CTD small phosphatase-like protein 3 OS=Caenorhabditis elegans GN=scpl-3 PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 6.270e-44 Identity = 89/181 (49.17%), Postives = 121/181 (66.85%), Query Frame = 2 Query: 83 LFIKNLPELSSVVPTFRPMLLPKQTRSCPPXXXXXXXXXXXXHSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPIESWFDDRSDQELLRLLPF 625 + + NLP L+ + + P L P +TRS P H +L P D+A FPV F + VYVR RP+L+ FL R++ FEIIIFTAS+ +YA +L ++LDP++ RHR+FRE CV V GNY+KDL++LGRD S +I+DN+ Q+F +Q+DNGIPIESWF DR+D ELL+L F Sbjct: 36 VMLANLPPLTEEIMSRCPAL-PVKTRSTPEYTLVLDLDETLVHCSLTPLDNATMVFPVVFQNITYQVYVRLRPHLRTFLSRMAKTFEIIIFTASKKVYANKLCDILDPRKNHIRHRLFREHCVCVFGNYVKDLTILGRDPSKTMILDNAVQSFAYQLDNGIPIESWFHDRNDTELLKLCSF 215
BLAST of CX294578 vs. ExPASy Swiss-Prot
Match: CTDSL_MOUSE (CTD small phosphatase-like protein OS=Mus musculus GN=Ctdspl PE=2 SV=2) HSP 1 Score: 151.754 bits (382), Expect = 2.821e-36 Identity = 74/140 (52.86%), Postives = 103/140 (73.57%), Query Frame = 2 Query: 209 HSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPIESWFDDRSDQELLRLLPFF 628 HS+ +P +ADF PV + H VYV RP++ +FL+R+ LFE ++FTAS + YA+ + ++LD + +FR R+FRESCVF GNY+KDLS LGR+LS VIIVDNSP ++ F +N +P++SWFDD +D ELL L+PFF Sbjct: 119 HSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQLFECVLFTASLAKYADPVADLLD-RWGVFRARLFRESCVFHRGNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQSWFDDMTDTELLDLIPFF 257
BLAST of CX294578 vs. ExPASy Swiss-Prot
Match: CTDSL_HUMAN (CTD small phosphatase-like protein OS=Homo sapiens GN=CTDSPL PE=1 SV=2) HSP 1 Score: 151.754 bits (382), Expect = 2.821e-36 Identity = 74/140 (52.86%), Postives = 103/140 (73.57%), Query Frame = 2 Query: 209 HSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPIESWFDDRSDQELLRLLPFF 628 HS+ +P +ADF PV + H VYV RP++ +FL+R+ LFE ++FTAS + YA+ + ++LD + +FR R+FRESCVF GNY+KDLS LGR+LS VIIVDNSP ++ F +N +P++SWFDD +D ELL L+PFF Sbjct: 119 HSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQLFECVLFTASLAKYADPVADLLD-RWGVFRARLFRESCVFHRGNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQSWFDDMTDTELLDLIPFF 257
BLAST of CX294578 vs. ExPASy Swiss-Prot
Match: CTDSL_CHICK (CTD small phosphatase-like protein OS=Gallus gallus GN=NFI1 PE=2 SV=2) HSP 1 Score: 151.754 bits (382), Expect = 2.821e-36 Identity = 74/140 (52.86%), Postives = 103/140 (73.57%), Query Frame = 2 Query: 209 HSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPIESWFDDRSDQELLRLLPFF 628 HS+ +P +ADF PV + H VYV RP++ +FL+R+ LFE ++FTAS + YA+ + ++LD + +FR R+FRESCVF GNY+KDLS LGR+LS VIIVDNSP ++ F +N +P++SWFDD +D ELL L+PFF Sbjct: 118 HSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLD-RWGVFRARLFRESCVFHRGNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQSWFDDMTDTELLDLIPFF 256
BLAST of CX294578 vs. ExPASy Swiss-Prot
Match: CTDS1_MOUSE (Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 OS=Mus musculus GN=Ctdsp1 PE=1 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.829e-35 Identity = 74/140 (52.86%), Postives = 100/140 (71.43%), Query Frame = 2 Query: 209 HSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPIESWFDDRSDQELLRLLPFF 628 HS+ +P ++ADF PV + H VYV RP++ +FL+R+ LFE ++FTAS + YA+ + ++LD K FR R+FRESCVF GNY+KDLS LGRDL V+I+DNSP ++ F DN +P+ SWFD+ SD EL LLPFF Sbjct: 103 HSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLD-KWGAFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPVASWFDNMSDTELHDLLPFF 241
BLAST of CX294578 vs. ExPASy Swiss-Prot
Match: CTDS1_HUMAN (Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 OS=Homo sapiens GN=CTDSP1 PE=1 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.829e-35 Identity = 74/140 (52.86%), Postives = 100/140 (71.43%), Query Frame = 2 Query: 209 HSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPIESWFDDRSDQELLRLLPFF 628 HS+ +P ++ADF PV + H VYV RP++ +FL+R+ LFE ++FTAS + YA+ + ++LD K FR R+FRESCVF GNY+KDLS LGRDL V+I+DNSP ++ F DN +P+ SWFD+ SD EL LLPFF Sbjct: 103 HSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLD-KWGAFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPVASWFDNMSDTELHDLLPFF 241
BLAST of CX294578 vs. ExPASy Swiss-Prot
Match: CTDS2_HUMAN (Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2 OS=Homo sapiens GN=CTDSP2 PE=1 SV=2) HSP 1 Score: 146.362 bits (368), Expect = 1.185e-34 Identity = 70/142 (49.30%), Postives = 99/142 (69.72%), Query Frame = 2 Query: 209 HSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPIESWFDDRSDQELLRLLPFFGE 634 HS+ +P ++ADF P+ H VYV RPY+ +FL R+ LFE ++FTAS + YA+ + ++LD + +FR R+FRESCVF G Y+KDLS LGRDL +I+DNSP ++ F +N +P++SWFDD +D ELL L+P F E Sbjct: 114 HSSFKPINNADFIVPIEIEGTTHQVYVLKRPYVDEFLRRMGELFECVLFTASLAKYADPVTDLLD-RCGVFRARLFRESCVFHQGCYVKDLSRLGRDLRKTLILDNSPASYIFHPENAVPVQSWFDDMADTELLNLIPIFEE 254
BLAST of CX294578 vs. ExPASy Swiss-Prot
Match: CTDS2_MOUSE (Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2 OS=Mus musculus GN=Ctdsp2 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.022e-34 Identity = 70/142 (49.30%), Postives = 99/142 (69.72%), Query Frame = 2 Query: 209 HSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPIESWFDDRSDQELLRLLPFFGE 634 HS+ +P ++ADF PV H VYV RPY+ +FL R+ LFE ++FTAS + YA+ + ++LD + +FR R+FRE+CVF G Y+KDLS LGRDL +I+DNSP ++ F +N +P++SWFDD +D ELL L+P F E Sbjct: 113 HSSFKPINNADFIVPVEIEGTTHQVYVLKRPYVDEFLRRMGELFECVLFTASLAKYADPVTDLLD-RCGVFRARLFREACVFHQGCYVKDLSRLGRDLRKTVILDNSPASYIFHPENAVPVQSWFDDMADTELLNLIPVFEE 253
BLAST of CX294578 vs. ExPASy Swiss-Prot
Match: CTDS_DICDI (Probable C-terminal domain small phosphatase OS=Dictyostelium discoideum GN=fcpA PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 4.980e-33 Identity = 71/142 (50.00%), Postives = 95/142 (66.90%), Query Frame = 2 Query: 209 HSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPIESWFDDRSDQELLRLLPFFGE 634 HS+ +P + DF PV H VYV RP++ DFL ++ FEI++FTAS + YA+ +L+ LD R + +R+FRESC GNY+KDLS LGRDL IIVDNSP ++ F +N IPI+SWFDD+ D+ELL LLP + Sbjct: 149 HSSFKPVHNPDFIVPVEIEGTIHQVYVVKRPFVDDFLRAIAEKFEIVVFTASLAKYADPVLDFLDTGR-VIHYRLFRESCHNHKGNYVKDLSRLGRDLKSTIIVDNSPSSYLFHPENAIPIDSWFDDKDDRELLDLLPLLDD 289
BLAST of CX294578 vs. ExPASy Swiss-Prot
Match: PSR2_YEAST (Probable phosphatase PSR2 OS=Saccharomyces cerevisiae GN=PSR2 PE=1 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.227e-31 Identity = 67/138 (48.55%), Postives = 91/138 (65.94%), Query Frame = 2 Query: 209 HSTLEPCDDADFTFPVNFNLQKHTVYVRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPIESWFDDRSDQELLRLLP 622 HS+ + ADF PV + Q H VYV RP + +FL RVS L+E+++FTAS S YA LL+ LDP + HR+FRE+C +GNY+K+LS +GR LS II+DNSP ++ F + +PI SWF D D ELL ++P Sbjct: 240 HSSFKYMHSADFVLPVEIDDQVHNVYVIKRPGVDEFLNRVSQLYEVVVFTASVSRYANPLLDTLDPNGTI-HHRLFREACYNYEGNYIKNLSQIGRPLSETIILDNSPASYIFHPQHAVPISSWFSDTHDNELLDIIP 376 The following BLAST results are available for this feature:
BLAST of CX294578 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294578 ID=CX294578; Name=CX294578; organism=Citrus clementina; type=EST; length=635bpback to top |