CX294578
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294578 vs. ExPASy Swiss-Prot
Match: TIM50_PONAB (Mitochondrial import inner membrane translocase subunit TIM50 OS=Pongo abelii GN=TIMM50 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.967e-13 Identity = 37/110 (33.64%), Postives = 68/110 (61.82%), Query Frame = 2 Query: 296 RPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPIESWFDDRSDQELLRLLPF 625 RP ++ ++++ L+EI+IFT+ + A L++ +DP +R+FR++ ++DG+++KD+S L RD + V++VD +AF Q NG+ + W + D+ LL L F Sbjct: 174 RPGIETLFQQLAPLYEIVIFTSETGMTAFPLIDSVDP-HGFISYRLFRDATRYMDGHHVKDISCLNRDPARVVVVDCKKEAFRLQPYNGVALRPWDGNSDDRVLLDLSAF 282
BLAST of CX294578 vs. ExPASy Swiss-Prot
Match: TIM50_HUMAN (Mitochondrial import inner membrane translocase subunit TIM50 OS=Homo sapiens GN=TIMM50 PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 1.967e-13 Identity = 37/110 (33.64%), Postives = 68/110 (61.82%), Query Frame = 2 Query: 296 RPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPIESWFDDRSDQELLRLLPF 625 RP ++ ++++ L+EI+IFT+ + A L++ +DP +R+FR++ ++DG+++KD+S L RD + V++VD +AF Q NG+ + W + D+ LL L F Sbjct: 174 RPGIETLFQQLAPLYEIVIFTSETGMTAFPLIDSVDP-HGFISYRLFRDATRYMDGHHVKDISCLNRDPARVVVVDCKKEAFRLQPYNGVALRPWDGNSDDRVLLDLSAF 282
BLAST of CX294578 vs. ExPASy Swiss-Prot
Match: TIM50_BOVIN (Mitochondrial import inner membrane translocase subunit TIM50 OS=Bos taurus GN=TIMM50 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.967e-13 Identity = 37/110 (33.64%), Postives = 68/110 (61.82%), Query Frame = 2 Query: 296 RPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPIESWFDDRSDQELLRLLPF 625 RP ++ ++++ L+EI+IFT+ + A L++ +DP +R+FR++ ++DG+++KD+S L RD + V++VD +AF Q NG+ + W + D+ LL L F Sbjct: 176 RPGIETLFQQLAPLYEIVIFTSETGMTAFPLIDSVDP-HGFISYRLFRDATRYMDGHHVKDISCLNRDPARVVVVDCKKEAFRLQPYNGVALRPWDGNSDDRVLLDLSAF 284
BLAST of CX294578 vs. ExPASy Swiss-Prot
Match: TIM50_CRYNE (Mitochondrial import inner membrane translocase subunit TIM50 OS=Cryptococcus neoformans GN=TIM50 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.570e-13 Identity = 38/110 (34.55%), Postives = 63/110 (57.27%), Query Frame = 2 Query: 296 RPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPIESWFDDRSDQELLRLLPF 625 RP + FL +S +EI++F++ A + +DP + +R+FRES V G +KD+S L RD S VI++D +P+ Q +NGI ++ W D+ L+ ++PF Sbjct: 262 RPGVDYFLGYLSQFYEIVLFSSQPLYTAAPIAEKIDPYQAFMPYRLFRESTRSVKGKVVKDISFLNRDPSKVIVLDVNPEHVALQPENGIVLQPWNGSPGDKGLVDMIPF 371
BLAST of CX294578 vs. ExPASy Swiss-Prot
Match: TIM50_DANRE (Mitochondrial import inner membrane translocase subunit TIM50 OS=Danio rerio GN=timm50 PE=2 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 3.356e-13 Identity = 38/110 (34.55%), Postives = 69/110 (62.73%), Query Frame = 2 Query: 296 RPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPIESWFDDRSDQELLRLLPF 625 RP + ++++ L+EI+IFT+ + A L++ +DP+ + +R+FR++ +++G+++KD+S L RD S VI+VD +AFG Q NG+ + W + D+ L L F Sbjct: 209 RPGIDYLFQQLAPLYEIVIFTSETGMTAYPLIDSIDPQGFVM-YRLFRDATRYMEGHHVKDVSCLNRDTSKVIVVDCKREAFGLQPFNGLALCKWDGNSEDRTLYDLAAF 317
BLAST of CX294578 vs. ExPASy Swiss-Prot
Match: TIM50_MOUSE (Mitochondrial import inner membrane translocase subunit TIM50 OS=Mus musculus GN=Timm50 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.724e-13 Identity = 36/110 (32.73%), Postives = 68/110 (61.82%), Query Frame = 2 Query: 296 RPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPIESWFDDRSDQELLRLLPF 625 RP ++ ++++ L+EI+IFT+ + A L++ +DP +R+FR++ +++G+++KD+S L RD + V++VD +AF Q NG+ + W + D+ LL L F Sbjct: 174 RPGIETLFQQLAPLYEIVIFTSETGMTAFPLIDSVDP-HGFISYRLFRDATRYMEGHHVKDISCLNRDPARVVVVDCKKEAFRLQPFNGVALRPWDGNSDDRVLLDLSAF 282
BLAST of CX294578 vs. ExPASy Swiss-Prot
Match: TI50C_DROME (Mitochondrial import inner membrane translocase subunit TIM50-C OS=Drosophila melanogaster GN=ttm50 PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.666e-12 Identity = 43/129 (33.33%), Postives = 68/129 (52.71%), Query Frame = 2 Query: 239 DFTFPVNFNLQKHTVYVRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPIESWFDDRSDQELLRLLPF 625 D+T+ + +K RP + FL + FEI++FTA Q + +L+ LDP + +R+ R++ FVDG+++K+L L RDL VI+VD A DN + W + D +LL L+ F Sbjct: 243 DWTYQTGWRFKK-------RPGVDHFLAECAKDFEIVVFTAEQGMTVFPILDALDPNGYIM-YRLVRDATHFVDGHHVKNLDNLNRDLKKVIVVDWDANATKMHPDNTFGLARWHGNDDDGQLLDLIAF 363
BLAST of CX294578 vs. ExPASy Swiss-Prot
Match: TI50A_DROME (Mitochondrial import inner membrane translocase subunit TIM50-A OS=Drosophila melanogaster GN=ttm3 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.175e-12 Identity = 43/129 (33.33%), Postives = 68/129 (52.71%), Query Frame = 2 Query: 239 DFTFPVNFNLQKHTVYVRCRPYLKDFLERVSSLFEIIIFTASQSIYAEQLLNVLDPKRKLFRHRVFRESCVFVDGNYLKDLSVLGRDLSHVIIVDNSPQAFGFQVDNGIPIESWFDDRSDQELLRLLPF 625 D+T+ + +K RP + FL++ S FEI+I+T+ Q + A LL+ LDP + ++R+ R + V+G + K+L L RDLS VI+VD P DN + + W + D +L L F Sbjct: 154 DWTYQTGWRFKK-------RPGVDYFLQQCSRNFEIVIYTSEQGMTAFPLLDALDPYGYI-KYRLVRGATDLVEGQHTKNLDYLNRDLSRVIVVDCDPYTTPLHPDNSLVLTKWLGNDDDVQLFDLTAF 274 The following BLAST results are available for this feature:
BLAST of CX294578 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294578 ID=CX294578; Name=CX294578; organism=Citrus clementina; type=EST; length=635bpback to top |