CX294598
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294598 vs. ExPASy Swiss-Prot
Match: AGAP1_HUMAN (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 OS=Homo sapiens GN=AGAP1 PE=1 SV=4) HSP 1 Score: 102.064 bits (253), Expect = 2.460e-21 Identity = 47/108 (43.52%), Postives = 71/108 (65.74%), Query Frame = 3 Query: 18 RDNRICADCGAPDPKWASANIGVFICLKCCGVHRSLGTHVSKVLSVTLDDWSDDEVDAMIEVGGNSSANAIYEAFIPEGVSKPGPDSSHEIRSKFIRSKYELQEFLKP 341 R N C DC +P WAS N+G +C++C G+HR+LGTH+S+V S+ LDDW + + M + GN AN+++E +G +KP DS+ E + ++IR+KYE + FL P Sbjct: 619 RGNSHCVDCETQNPNWASLNLGALMCIECSGIHRNLGTHLSRVRSLDLDDWPVELIKVMSSI-GNELANSVWEE-SSQGRTKPSVDSTREEKERWIRAKYEQKLFLAP 724
BLAST of CX294598 vs. ExPASy Swiss-Prot
Match: AGAP1_MOUSE (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 OS=Mus musculus GN=Agap1 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.213e-21 Identity = 47/108 (43.52%), Postives = 71/108 (65.74%), Query Frame = 3 Query: 18 RDNRICADCGAPDPKWASANIGVFICLKCCGVHRSLGTHVSKVLSVTLDDWSDDEVDAMIEVGGNSSANAIYEAFIPEGVSKPGPDSSHEIRSKFIRSKYELQEFLKP 341 R N C DC +P WAS N+G +C++C G+HR+LGTH+S+V S+ LDDW + + M + GN AN+++E +G +KP DS+ E + ++IR+KYE + FL P Sbjct: 619 RGNSHCVDCDTQNPNWASLNLGALMCIECSGIHRNLGTHLSRVRSLDLDDWPMELIKVMSSI-GNELANSVWEEG-SQGRTKPSLDSTREEKERWIRAKYEQKLFLAP 724
BLAST of CX294598 vs. ExPASy Swiss-Prot
Match: AGA11_HUMAN (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 11 OS=Homo sapiens GN=AGAP11 PE=2 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 4.196e-21 Identity = 50/108 (46.30%), Postives = 71/108 (65.74%), Query Frame = 3 Query: 18 RDNRICADCGAPDPKWASANIGVFICLKCCGVHRSLGTHVSKVLSVTLDDWSDDEVDAMIEVGGNSSANAIYEAFIPEGVSKPGPDSSHEIRSKFIRSKYELQEFLKP 341 R N C DC +PKWAS N+GV +C++C G+HRSLGT +S+V S+ LDDW + M + GN AN+I+E +G +KP +S+ E + ++IRSKYE + FL P Sbjct: 338 RGNSHCVDCETQNPKWASLNLGVLMCIECSGIHRSLGTRLSRVRSLELDDWPVELRKVMSSI-GNDLANSIWEG-SSQGQTKPSIESTREEKERWIRSKYEHKLFLAP 443
BLAST of CX294598 vs. ExPASy Swiss-Prot
Match: ACAP1_BOVIN (Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1 OS=Bos taurus GN=ACAP1 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.196e-21 Identity = 60/152 (39.47%), Postives = 80/152 (52.63%), Query Frame = 3 Query: 24 NRICADCGAPDPKWASANIGVFICLKCCGVHRSLGTHVSKVLSVTLDDWSDDEVDAMIEVGGNSSANAIYEAFIPE-GVSKPGPDSSHEIRSKFIRSKYELQEFLK--PSLR-------IASGKPSASLQSSFSRKIIDSFRSTNSSQKKDV 449 N C DC P P+WAS N+GV +C++C G+HRSLG H SKV S+TLD W + V M E+ GN N IYEA + V KPGP S + + +I +KY ++FL P +R G P + R SFRS +D+ Sbjct: 417 NAQCCDCREPAPEWASINLGVTLCIQCSGIHRSLGVHFSKVRSLTLDSWEPELVKLMCEL-GNVVINQIYEARVEAMAVKKPGPSCSRQEKEAWIHAKYVEKKFLTKLPEIRGRRGGRGPPRGHPPVPPKPGLIRPKPGSFRSKPEPPSEDL 567
BLAST of CX294598 vs. ExPASy Swiss-Prot
Match: AGAP4_HUMAN (Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 4 OS=Homo sapiens GN=AGAP4 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.480e-21 Identity = 50/108 (46.30%), Postives = 70/108 (64.81%), Query Frame = 3 Query: 18 RDNRICADCGAPDPKWASANIGVFICLKCCGVHRSLGTHVSKVLSVTLDDWSDDEVDAMIEVGGNSSANAIYEAFIPEGVSKPGPDSSHEIRSKFIRSKYELQEFLKP 341 R N C DC +PKWAS N+GV +C++C G+HRSLGT +S+V S+ LDDW + M + GN AN+I+E +G +KP S+ E + ++IRSKYE + FL P Sbjct: 451 RGNAHCVDCETQNPKWASLNLGVLMCIECSGIHRSLGTRLSRVRSLELDDWPVELRKVMSSI-GNDLANSIWEG-SSQGQTKPSEKSTREEKERWIRSKYEEKLFLAP 556
BLAST of CX294598 vs. ExPASy Swiss-Prot
Match: ACAP1_MOUSE (Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1 OS=Mus musculus GN=Acap1 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.480e-21 Identity = 50/105 (47.62%), Postives = 66/105 (62.86%), Query Frame = 3 Query: 24 NRICADCGAPDPKWASANIGVFICLKCCGVHRSLGTHVSKVLSVTLDDWSDDEVDAMIEVGGNSSANAIYEAFIPE-GVSKPGPDSSHEIRSKFIRSKYELQEFL 335 N C DC P P+WAS N+GV +C++C G+HRSLG H SKV S+TLD W + V M E+ GN N IYEA + V KPGP S + + +I +KY ++FL Sbjct: 417 NAQCCDCREPAPEWASINLGVTLCIQCSGIHRSLGVHFSKVRSLTLDSWEPELVKLMCEL-GNVIINQIYEARVEAMAVKKPGPSCSRQEKEAWIHAKYVEKKFL 520
BLAST of CX294598 vs. ExPASy Swiss-Prot
Match: ACAP1_HUMAN (Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1 OS=Homo sapiens GN=ACAP1 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.480e-21 Identity = 50/105 (47.62%), Postives = 66/105 (62.86%), Query Frame = 3 Query: 24 NRICADCGAPDPKWASANIGVFICLKCCGVHRSLGTHVSKVLSVTLDDWSDDEVDAMIEVGGNSSANAIYEAFIPE-GVSKPGPDSSHEIRSKFIRSKYELQEFL 335 N C DC P P+WAS N+GV +C++C G+HRSLG H SKV S+TLD W + V M E+ GN N IYEA + V KPGP S + + +I +KY ++FL Sbjct: 417 NAQCCDCREPAPEWASINLGVTLCIQCSGIHRSLGVHFSKVRSLTLDSWEPELVKLMCEL-GNVIINQIYEARVEAMAVKKPGPSCSRQEKEAWIHAKYVEKKFL 520
BLAST of CX294598 vs. ExPASy Swiss-Prot
Match: UCP3_SCHPO (UBA domain-containing protein 3 OS=Schizosaccharomyces pombe GN=ucp3 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 9.348e-21 Identity = 55/143 (38.46%), Postives = 84/143 (58.74%), Query Frame = 3 Query: 24 NRICADCGAPDPKWASANIGVFICLKCCGVHRSLGTHVSKVLSVTLDDWSDDEVDAMIEVGGNSSANAIYEAFIPEGVSKPGPD---SSHEIRSKFIRSKYELQEFLKPSLRIASGKPSASLQSSFSRKIIDSFRSTNSSQKK 443 N +CADC +WAS N+G+F+CL+C +HR LGTHVSKV S++LD+WS+D+++ M + GN +AN + P +S P P S + K+IR KYE + FL + S PS ++ S + ST++S+ + Sbjct: 20 NNLCADCSTRGVQWASWNLGIFLCLRCATIHRKLGTHVSKVKSISLDEWSNDQIEKM-KHWGNINANRYWN---PNPLSHPLPTNALSDEHVMEKYIRDKYERKLFLDENHSTNSKPPSLPPRTKSSSQ-SSPMASTSTSKSR 157
BLAST of CX294598 vs. ExPASy Swiss-Prot
Match: ACAP2_RAT (Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 OS=Rattus norvegicus GN=Acap2 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 9.348e-21 Identity = 48/105 (45.71%), Postives = 68/105 (64.76%), Query Frame = 3 Query: 24 NRICADCGAPDPKWASANIGVFICLKCCGVHRSLGTHVSKVLSVTLDDWSDDEVDAMIEVGGNSSANAIYEAFIPE-GVSKPGPDSSHEIRSKFIRSKYELQEFL 335 N C DCG DP+WAS N+G+ +C++C G+HRSLG H SKV S+TLD W + + M E+ GN N +YEA + + GV KP P E + +IR+KY ++F+ Sbjct: 411 NTSCCDCGLADPRWASINLGITLCIECSGIHRSLGVHFSKVRSLTLDTWEPELLKLMCEL-GNDVINRVYEAKLEKMGVKKPQPGQRQE-KEAYIRAKYVERKFV 513
BLAST of CX294598 vs. ExPASy Swiss-Prot
Match: ACAP2_MOUSE (Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 OS=Mus musculus GN=Acap2 PE=1 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 9.348e-21 Identity = 48/105 (45.71%), Postives = 68/105 (64.76%), Query Frame = 3 Query: 24 NRICADCGAPDPKWASANIGVFICLKCCGVHRSLGTHVSKVLSVTLDDWSDDEVDAMIEVGGNSSANAIYEAFIPE-GVSKPGPDSSHEIRSKFIRSKYELQEFL 335 N C DCG DP+WAS N+G+ +C++C G+HRSLG H SKV S+TLD W + + M E+ GN N +YEA + + GV KP P E + +IR+KY ++F+ Sbjct: 411 NTSCCDCGLADPRWASINLGITLCIECSGIHRSLGVHFSKVRSLTLDTWEPELLKLMCEL-GNDVINRVYEAKLEKMGVKKPQPGQRQE-KEAYIRAKYVERKFV 513 The following BLAST results are available for this feature:
BLAST of CX294598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294598 ID=CX294598; Name=CX294598; organism=Citrus clementina; type=EST; length=623bpback to top |