CX294779

Overview
NameCX294779
Unique NameCX294779
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length611
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATL1_FELCA (Cathepsin L1 (Fragment) OS=Felis catus GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 7.186e-26
Identity = 61/140 (43.57%), Postives = 84/140 (60.00%), Query Frame = 2
Query:  110 GGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTS--LDHGVTAVGYG-----TENGADYWIVKNSWGSSWGEAGYIRMERN 508
            GGL+D AF+++ DNGG+D+EE YPY A   SC  YR    V  + DY D+P  + + +    A  P+S AI+     F+ Y+ GI+     +S  +DHGV  VGYG     TEN   YWI+KNSWG+ WG  GYI+M ++
Sbjct:    1 GGLIDDAFQYVKDNGGLDSEESYPYHAQGDSC-KYRPENSVANVTDYWDIPSKENELMITLAAVGPISAAIDASLDTFRFYKEGIYYDPSCSSEDVDHGVLVVGYGADGTETEN-KKYWIIKNSWGTDWGMDGYIKMAKD 138          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CYSP_TRYCR (Cruzipain OS=Trypanosoma cruzi PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 9.385e-26
Identity = 65/174 (37.36%), Postives = 97/174 (55.75%), Query Frame = 2
Query:   47 LISLSEQELVDCDTSYNEGCNGGLMDYAFEFII--DNGGIDTEEDYPYKAIDGSCDTYRKNAKVV--TIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEAS 556
            L +LSEQ LV CD + + GC+GGLM+ AFE+I+  +NG + TE+ YPY + +G       +   V  TI  + ++P ++ +       N PV+VA++    ++  Y  G+ T      LDHGV  VGY       YWI+KNSW + WGE GYIR+ +      + +C +  EAS
Sbjct:  167 LTNLSEQMLVSCDKT-DSGCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPVAVAVDAS--SWMTYTGGVMTSCVSEQLDHGVLLVGYNDSAAVPYWIIKNSWTTQWGEEGYIRIAKG-----SNQCLVKEEAS 332          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATM_MOUSE (Cathepsin M OS=Mus musculus GN=Ctsm PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.601e-25
Identity = 70/190 (36.84%), Postives = 99/190 (52.11%), Query Frame = 2
Query:   11 AVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGI-FTGRCGTS-LDHGVTAVGYG----TENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 559
            A+EG     TG LI LS Q LVDC     N GC  G    A  ++++NGG+++E  YPY+  DGSC  Y        I  +E VP N++  +    +  P+SVAI+    +F  Y+ GI +   C +  + H +  VGYG      +G  YW+VKNS G+ WG  GY+++ R+        CGIA  A Y
Sbjct:  146 AIEGQMFRKTGQLIPLSVQNLVDCSRPQGNWGCYLGNTYLALHYVMENGGLESEATYPYEEKDGSC-RYSPENSTANITGFEFVPKNEDALMNAVASIGPISVAIDARHASFLFYKRGIYYEPNCSSCVVTHSMLLVGYGFTGRESDGRKYWLVKNSMGTQWGNKGYMKISRDKG----NHCGIATYALY 330          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATV_NPVMC (Viral cathepsin OS=Mamestra configurata nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.731e-25
Identity = 67/182 (36.81%), Postives = 97/182 (53.30%), Query Frame = 2
Query:    5 IAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAME 550
            + A+E    I    LI L+EQ+LVDCD   + GC+GGL+  A+E I+  GG++ E DYPYKA+   C        V   + Y  V L++E+         P+++A++   +    Y  G+ +      L+H V  VGYG EN   YW +KNSWGS +GE GY+R+ R V       CG+  E
Sbjct:  156 LGALESQYAIKYDRLIDLAEQQLVDCDF-VDMGCDGGLIHTAYEQIMHIGGVEQEYDYPYKAVRLPCAVKPHKFAVGVRNCYRYVLLSEERLEDLLRHVGPIAIAVDAVDLTD--YYGGVISFCENNGLNHAVLLVGYGIENNVPYWTIKNSWGSDYGENGYVRIRRGV-----NSCGMINE 329          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATR_MOUSE (Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.731e-25
Identity = 64/181 (35.36%), Postives = 98/181 (54.14%), Query Frame = 2
Query:   38 TGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIF-TGRCGT-SLDHGVTAVGYGTE----NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 559
            TG L  LS Q LVDC     N GC GG    AF++++ NGG+++E  YPY+  DG C    KN+K   I  +  +P +++  +       P++  I+    +F+ Y+ GI+    C + ++ HGV  VGYG +    +G  YW++KNSWG  WG  GY+++ ++        CGIA  A Y
Sbjct:  156 TGKLTPLSVQNLVDCSKPQGNNGCLGGDTYNAFQYVLHNGGLESEATYPYEGKDGPCRYNPKNSK-AEITGFVSLPQSEDILMAAVATIGPITAGIDASHESFKNYKGGIYHEPNCSSDTVTHGVLVVGYGFKGIETDGNHYWLIKNSWGKRWGIRGYMKLAKD----KNNHCGIASYAHY 331          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATV_NPVSE (Viral cathepsin OS=Spodoptera exigua nuclear polyhedrosis virus (strain US) GN=VCATH PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 4.658e-25
Identity = 69/183 (37.70%), Postives = 96/183 (52.46%), Query Frame = 2
Query:    2 TIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAME 550
            ++ A+E    I    LI LSEQ+LVDCD   + GC+GGL+  A+E I+  GG++ E DY YKA    C            + Y  V LN+E+         P+++A++   +    Y  GI +      L+H V  VGYG EN   YWI+KNSWGS +GE GY+R+ R V       CG+  E
Sbjct:  155 SLGALESQYAIKYDRLIDLSEQQLVDCDF-VDMGCDGGLIHTAYEQIMKMGGVEQEFDYSYKAERQPCALKPHKFATGVRNCYRYVILNEERLEDLLRYVGPIAIAVDAVDLTD--YYGGIVSFCENNGLNHAVLLVGYGVENNVPYWIIKNSWGSDYGEDGYVRVRRGV-----NSCGMINE 329          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATV_NPVBS (Viral cathepsin OS=Buzura suppressaria nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.038e-24
Identity = 66/184 (35.87%), Postives = 93/184 (50.54%), Query Frame = 2
Query:    2 TIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDD-YEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAME 550
            T+A++E    I     I LSEQ+++DCD   + GC+GGL+  AFE +I  G +  E +YPY  ++  C+       VV +   Y  V   +EK      A  P+ +AI+  G+    Y  GI        L+H V  VGYG EN   +W  KN+WG  WGE GY R+ +NV       CG+  E
Sbjct:  145 TLASIESQYAIKNNVHIDLSEQQMIDCDY-VDMGCDGGLLHTAFEQMIQMGELVQEHEYPYAGVNKPCELRGDETGVVKVKGCYRYVVFREEKLKDLLRAVGPIPMAIDASGIVN--YHHGIIHYCENYGLNHAVLLVGYGVENNVPFWTFKNTWGKDWGEEGYFRVRQNV-----DACGMTNE 320          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CYSP_THEPA (Cysteine proteinase OS=Theileria parva GN=TP03_0285 PE=3 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 1.355e-24
Identity = 66/182 (36.26%), Postives = 102/182 (56.04%), Query Frame = 2
Query:    2 TIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTGRCGTSLDHGVTAVGYGTENGAD--YWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGI 541
            T+ +VEG           LS QEL+DCD S++ GC GGL++ A+E++    G+ + +D P+      C   +  AK V++  Y       ++ + +++ + P SV +       + Y+SG+FTG CG SL+H V  VG G +      YW+V+NSWG+ WGE GY+R+ER   G  T KCG+
Sbjct:  258 TVGSVEGYYMSHFDKSYELSVQELLDCD-SFSNGCQGGLLESAYEYV-RKYGLVSAKDLPFVDKARRCSVPK--AKKVSVPSYH--VFKGKEVMTRSLTSSPCSVYLSVSPELAK-YKSGVFTGECGKSLNHAVVLVGEGYDEVTKKRYWVVQNSWGTDWGENGYMRLERTNMG--TDKCGV 430          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATQ_RAT (Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.355e-24
Identity = 62/189 (32.80%), Postives = 98/189 (51.85%), Query Frame = 2
Query:   11 AVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIF-TGRCGTSLDHGVTAVGYGTE----NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 559
            A+EG     TG LI LS Q L+DC     N GC  G    AF++++ NGG++ E  YPY+  +G C    KN+    I  +  +P +++  +       P++  +     +F+ Y+ G++   +C + ++H V  VGYG E    +G +YW++KNSWG  WG  GY++    +A      C IA  A Y
Sbjct:  157 AIEGQMFKKTGKLIPLSVQNLIDCSKPQGNRGCLWGNTYNAFQYVLHNGGLEAEATYPYERKEGVCRYNPKNSS-AKITGFVVLPESEDVLMDAVATKGPIATGVHVISSSFRFYQKGVYHEPKCSSYVNHAVLVVGYGFEGNETDGNNYWLIKNSWGKRWGLRGYMK----IAKDRNNHCAIASLAQY 340          
BLAST of CX294779 vs. ExPASy Swiss-Prot
Match: CATL_SCHMA (Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.019e-24
Identity = 70/175 (40.00%), Postives = 94/175 (53.71%), Query Frame = 2
Query:   38 TGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPYKAIDGSCDTYRKNAKVVTIDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGI------FTGRCGTSLDHGVTAVGYG-TENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGI 541
            TG L+SLSEQ+LVDCD   ++GCNGGL   A+E II  GG+  E++YPY A +  C   + +   V I+   ++  ++ +       N  +SV +    +  Q Y+ GI      F  +    LDH V  VGYG +E    +WIVKNSWG  WGE GY RM R       G CGI
Sbjct:  146 TGKLLSLSEQQLVDCD-GLDDGCNGGLPSNAYESIIKMGGLMLEDNYPYDAKNEKCHL-KTDGVAVYINSSVNLTQDETELAAWLYHNSTISVGMNA--LLLQFYQHGISHPWWIFCSKY--LLDHAVLLVGYGVSEKNEPFWIVKNSWGVEWGENGYFRMYRG-----DGSCGI 309          
The following BLAST results are available for this feature:
BLAST of CX294779 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
CATL1_FELCA7.186e-2643.57Cathepsin L1 (Fragment) OS=Felis catus GN=CTSL1 PE... [more]
CYSP_TRYCR9.385e-2637.36Cruzipain OS=Trypanosoma cruzi PE=1 SV=1[more]
CATM_MOUSE1.601e-2536.84Cathepsin M OS=Mus musculus GN=Ctsm PE=2 SV=1[more]
CATV_NPVMC2.731e-2536.81Viral cathepsin OS=Mamestra configurata nucleopoly... [more]
CATR_MOUSE2.731e-2535.36Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1[more]
CATV_NPVSE4.658e-2537.70Viral cathepsin OS=Spodoptera exigua nuclear polyh... [more]
CATV_NPVBS1.038e-2435.87Viral cathepsin OS=Buzura suppressaria nuclear pol... [more]
CYSP_THEPA1.355e-2436.26Cysteine proteinase OS=Theileria parva GN=TP03_028... [more]
CATQ_RAT1.355e-2432.80Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1[more]
CATL_SCHMA3.019e-2440.00Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionC05055H01SK FlavSen1 Citrus clementina cDNA clone C05055H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294779 ID=CX294779; Name=CX294779; organism=Citrus clementina; type=EST; length=611bp
AACCATTGCAGCTGTAGAGGGTATAAACAAGATTGTTACAGGTAGCCTGA
TCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATACATCATATAATGAA
GGATGTAATGGTGGTTTGATGGACTATGCATTCGAGTTCATTATTGATAA
TGGAGGTATTGACACAGAAGAAGATTACCCCTACAAAGCCATTGATGGTA
GCTGTGACACATATCGGAAAAATGCCAAAGTAGTTACAATTGATGACTAT
GAAGATGTTCCCCTAAATGACGAGAAAGCTTTGCAAAAGGCAGTTGCAAA
TCAACCCGTGAGTGTTGCCATTGAAGGAGGTGGCATGGCATTCCAGTTAT
ATGAATCGGGTATATTTACGGGAAGATGTGGGACATCTCTGGACCATGGT
GTTACTGCTGTTGGATATGGCACAGAAAATGGAGCTGATTACTGGATTGT
GAAGAATTCATGGGGCAGTAGCTGGGGAGAGGCTGGCTATATTAGGATGG
AGCGTAACGTGGCTGGCACTCTCACGGGCAAGTGTGGAATTGCCATGGAG
GCCTCATATCCCATAAAGAAAGGCCAAAATCCTCCCAACCCTGGACCGTC
CCCTCCATCTC
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